BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020540
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534534.1| NAC domain-containing protein, putative [Ric...    58   2e-06
gb|AAT38710.2| no apical meristem, identical [Solanum demissum]        39   5e-06
gb|AAT39970.1| Putative nam-like protein, identical [Solanum dem...    39   5e-06

>ref|XP_002534534.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223525097|gb|EEF27849.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 399

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 46/135 (34%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
 Frame = -3

Query: 352 SGDHQNCSTLSSVHVCCFLERQSSQGDQN*LGKHMFRLTSVTGLTPPKKHIGKSFPANNT 173
           S D   C  L    V  F   ++++G +     H FRL SV   +PPKK + KS P N+ 
Sbjct: 107 SSDGTKCIGLKKSLV--FYRGRAAKGMKTDWMMHEFRLPSVAEPSPPKKFLDKSLPPNDA 164

Query: 172 -------KKCSKLHGTESSHSWASPFPEMAASDI-------ALH*VPRTHPQ----TEAG 47
                  KK + +     +HSW +  PE  A DI       A H    +       TE G
Sbjct: 165 WAICRIFKKTNSMAQRALNHSWITQLPETTAPDILNQGAAAAGHCTQYSSENISCTTEIG 224

Query: 46  LVFQLC*NNDLQQSS 2
            VFQ+C N DLQQ+S
Sbjct: 225 SVFQICSNTDLQQAS 239


>gb|AAT38710.2| no apical meristem, identical [Solanum demissum]
          Length = 363

 Score = 38.9 bits (89), Expect(2) = 5e-06
 Identities = 21/44 (47%), Positives = 25/44 (56%)
 Frame = -1

Query: 390 NSLKPSRVSGAGFLETTRTVPRYHPYMSVVF*RGRAAKGIKTDW 259
           NS +P+RV+GAGF + T                GRAAKGIKTDW
Sbjct: 73  NSARPNRVTGAGFWKAT----------------GRAAKGIKTDW 100



 Score = 37.4 bits (85), Expect(2) = 5e-06
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
 Frame = -3

Query: 253 HMFRLTSVTGLTPPKKHIGKSFPANNT-------KKCSKLHGTESSHSWASP 119
           H FRL S+T  T PK+ + K  P N++       KK +       SHSW SP
Sbjct: 103 HEFRLPSITDSTAPKRFLDKHIPPNDSWAICRIFKKANSNAHRALSHSWVSP 154


>gb|AAT39970.1| Putative nam-like protein, identical [Solanum demissum]
          Length = 363

 Score = 38.9 bits (89), Expect(2) = 5e-06
 Identities = 21/44 (47%), Positives = 25/44 (56%)
 Frame = -1

Query: 390 NSLKPSRVSGAGFLETTRTVPRYHPYMSVVF*RGRAAKGIKTDW 259
           NS +P+RV+GAGF + T                GRAAKGIKTDW
Sbjct: 73  NSARPNRVTGAGFWKAT----------------GRAAKGIKTDW 100



 Score = 37.4 bits (85), Expect(2) = 5e-06
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
 Frame = -3

Query: 253 HMFRLTSVTGLTPPKKHIGKSFPANNT-------KKCSKLHGTESSHSWASP 119
           H FRL S+T  T PK+ + K  P N++       KK +       SHSW SP
Sbjct: 103 HEFRLPSITDSTAPKRFLDKHIPPNDSWAICRIFKKANSNAHRALSHSWVSP 154