BLASTX nr result

ID: Coptis25_contig00020534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020534
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246...   115   4e-24
emb|CBI24251.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus comm...   110   2e-22
ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246624 [Vitis vinifera]
          Length = 884

 Score =  115 bits (288), Expect = 4e-24
 Identities = 68/144 (47%), Positives = 87/144 (60%)
 Frame = +1

Query: 1   NGDTSAQLLXXXXXXXXXXXIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXXXXXXX 180
           NGD+SAQLL           IITTLLEEYEN+F D  +H  S S DS++           
Sbjct: 338 NGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDDNLHRCSISADSRIENSGSEDSTDD 397

Query: 181 XXLKTKNITYHDAANEVNPEVDNDSERVLSGKLSGTSCYVGSDLYDNKAYVDEDFDVESP 360
             +  ++  YHDA NEV+P+ ++D ERV SGKLS +S Y GSDLYD KA+  +D DV SP
Sbjct: 398 ENIDMRDNGYHDAENEVDPDTEDDPERVHSGKLSESSGYAGSDLYDYKAFGVDDSDVGSP 457

Query: 361 EKNQSSTINQKPKLDPQKSLRDSN 432
             N++S +N    LD Q  +RDSN
Sbjct: 458 TDNRASEVNSN-LLDSQ-PVRDSN 479


>emb|CBI24251.3| unnamed protein product [Vitis vinifera]
          Length = 886

 Score =  115 bits (288), Expect = 4e-24
 Identities = 68/144 (47%), Positives = 87/144 (60%)
 Frame = +1

Query: 1   NGDTSAQLLXXXXXXXXXXXIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXXXXXXX 180
           NGD+SAQLL           IITTLLEEYEN+F D  +H  S S DS++           
Sbjct: 340 NGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDDNLHRCSISADSRIENSGSEDSTDD 399

Query: 181 XXLKTKNITYHDAANEVNPEVDNDSERVLSGKLSGTSCYVGSDLYDNKAYVDEDFDVESP 360
             +  ++  YHDA NEV+P+ ++D ERV SGKLS +S Y GSDLYD KA+  +D DV SP
Sbjct: 400 ENIDMRDNGYHDAENEVDPDTEDDPERVHSGKLSESSGYAGSDLYDYKAFGVDDSDVGSP 459

Query: 361 EKNQSSTINQKPKLDPQKSLRDSN 432
             N++S +N    LD Q  +RDSN
Sbjct: 460 TDNRASEVNSN-LLDSQ-PVRDSN 481


>ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|222845725|gb|EEE83272.1|
           predicted protein [Populus trichocarpa]
          Length = 876

 Score =  114 bits (286), Expect = 6e-24
 Identities = 66/144 (45%), Positives = 81/144 (56%)
 Frame = +1

Query: 1   NGDTSAQLLXXXXXXXXXXXIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXXXXXXX 180
           NGD SAQLL           IITTLLEEYEN+F D  +H  S S DSQ+           
Sbjct: 341 NGDNSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSQIENSASDDSSDD 400

Query: 181 XXLKTKNITYHDAANEVNPEVDNDSERVLSGKLSGTSCYVGSDLYDNKAYVDEDFDVESP 360
             +  K+  YHDA NEV+ + DND ER LSGKLS TS    SDLYD KA+  +D D+ SP
Sbjct: 401 ENMDMKDNGYHDAENEVDQDTDNDPERALSGKLSETSGSASSDLYDYKAFGGDDSDIGSP 460

Query: 361 EKNQSSTINQKPKLDPQKSLRDSN 432
             N +   +    +DP + +RDSN
Sbjct: 461 RTNNAPAESSNISVDPVQ-MRDSN 483


>ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus communis]
           gi|223534625|gb|EEF36321.1| Rho GTPase activator,
           putative [Ricinus communis]
          Length = 821

 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/128 (50%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
 Frame = +1

Query: 1   NGDTSAQLLXXXXXXXXXXXIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXXXXXXX 180
           NGD+SAQLL           IITTLLEEYEN+F D  +H  S S DS++           
Sbjct: 285 NGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSRIENSGSDYSSDD 344

Query: 181 XXLKTKNITYHDAANEVNPEVDN--DSERVLSGKLSGTSCYVGSDLYDNKAYVDEDFDVE 354
             +  K+  YHDA NEV+ E D+  D+ERVLSGKLS +S Y GSDLYD KA+   D DV 
Sbjct: 345 ENMDIKDNGYHDAENEVDQETDDDADAERVLSGKLSESSGYAGSDLYDYKAFGGADSDVG 404

Query: 355 SPEKNQSS 378
           SP  NQ+S
Sbjct: 405 SPRHNQAS 412


>ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|222850410|gb|EEE87957.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score =  109 bits (273), Expect = 2e-22
 Identities = 65/144 (45%), Positives = 81/144 (56%)
 Frame = +1

Query: 1   NGDTSAQLLXXXXXXXXXXXIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXXXXXXX 180
           NGD SAQLL           IITTLLEEYEN+F D  +H  S S DS++           
Sbjct: 337 NGDNSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSRIENSGSDDSTDD 396

Query: 181 XXLKTKNITYHDAANEVNPEVDNDSERVLSGKLSGTSCYVGSDLYDNKAYVDEDFDVESP 360
             +  K   YHDA NEV+ + D+D ERVLSGKLS +S    SDLYD KA+  +D DV SP
Sbjct: 397 ENMDMKENGYHDAENEVDQDSDDDPERVLSGKLSESSGSADSDLYDYKAFGGDDSDVGSP 456

Query: 361 EKNQSSTINQKPKLDPQKSLRDSN 432
             N +   +    +DP ++ RDSN
Sbjct: 457 RTNNAPAESSNISVDPVQT-RDSN 479


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