BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020529
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...   186   2e-45
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   171   4e-41
ref|XP_004155258.1| PREDICTED: CCR4-NOT transcription complex su...   168   4e-40
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...   168   4e-40
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...   167   6e-40

>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score =  186 bits (472), Expect = 2e-45
 Identities = 98/165 (59%), Positives = 117/165 (70%)
 Frame = -2

Query: 499  QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320
            Q L+ +S+LLE  VQL TNDNLDLGCA +EQAAT+KA+QTID EI  QL++RRKHR+GVG
Sbjct: 1335 QGLNSTSDLLEHAVQLATNDNLDLGCAAIEQAATDKAIQTIDAEIAQQLSLRRKHRDGVG 1394

Query: 319  ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140
             ++FDA+ Y+QG MGVVPE+LRPKPG LS SQQRVYEDFV+ PWQNQS Q          
Sbjct: 1395 PTFFDANLYSQGSMGVVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSGQGSHTIPMGSS 1454

Query: 139  XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLDL 5
                         AYG  SGQLN G YSSA G  GF A+++ LD+
Sbjct: 1455 TSAVSTALAG---AYGSGSGQLNPG-YSSAPGNVGFEAVSRTLDM 1495


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  171 bits (434), Expect = 4e-41
 Identities = 89/164 (54%), Positives = 114/164 (69%)
 Frame = -2

Query: 499  QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320
            Q+L+I++ +LE  VQLVTNDNLDLGCA++EQAAT+KA+ TID EIG QL++RRKHREG+G
Sbjct: 1414 QNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMG 1473

Query: 319  ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140
            +++FDA+ Y QG MG VPE LRPKPG+LS SQQRVYEDFV+ PWQNQSSQ          
Sbjct: 1474 STFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGVA 1533

Query: 139  XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLD 8
                           G  SGQ+N G   +    +G+  +++PLD
Sbjct: 1534 VQSGNTGLTG---TNGSVSGQINPGYPVT----TGYEGVSRPLD 1570


>ref|XP_004155258.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Cucumis
           sativus]
          Length = 634

 Score =  168 bits (426), Expect = 4e-40
 Identities = 90/164 (54%), Positives = 113/164 (68%)
 Frame = -2

Query: 499 QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320
           Q+L ++S+LLE  VQLVTNDNLDLGCA++EQAAT+KA+QTID EI  QL++RRKHREGV 
Sbjct: 147 QNLGVASDLLEQAVQLVTNDNLDLGCAIIEQAATDKAIQTIDGEIAQQLSLRRKHREGVN 206

Query: 319 ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140
            ++FD   Y QGP+GVVPE+LRPKPG LS SQQRVYEDFV+ P QNQ+SQ          
Sbjct: 207 TTFFDTGMYAQGPLGVVPEALRPKPGHLSVSQQRVYEDFVRLPLQNQNSQ-----AAQST 261

Query: 139 XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLD 8
                      S  +G +SGQLNSG  S     +G   +++ +D
Sbjct: 262 GSSVTASGTGLSNQFGLSSGQLNSGYTSGLV--TGLEGVSRSVD 303


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score =  168 bits (426), Expect = 4e-40
 Identities = 90/164 (54%), Positives = 113/164 (68%)
 Frame = -2

Query: 499  QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320
            Q+L ++S+LLE  VQLVTNDNLDLGCA++EQAAT+KA+QTID EI  QL++RRKHREGV 
Sbjct: 1414 QNLGVASDLLEQAVQLVTNDNLDLGCAIIEQAATDKAIQTIDGEIAQQLSLRRKHREGVN 1473

Query: 319  ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140
             ++FD   Y QGP+GVVPE+LRPKPG LS SQQRVYEDFV+ P QNQ+SQ          
Sbjct: 1474 TTFFDTGMYAQGPLGVVPEALRPKPGHLSVSQQRVYEDFVRLPLQNQNSQ-----AAQST 1528

Query: 139  XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLD 8
                       S  +G +SGQLNSG  S     +G   +++ +D
Sbjct: 1529 GSSVTASGTGLSNQFGLSSGQLNSGYTSGLV--TGLEGVSRSVD 1570


>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score =  167 bits (424), Expect = 6e-40
 Identities = 88/164 (53%), Positives = 112/164 (68%)
 Frame = -2

Query: 499  QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320
            Q+L I++ +LE  VQLVTNDNLDLGCA++E AAT+KA+ TID EI  QL++R+KHREG+G
Sbjct: 1400 QNLGIANEILEPAVQLVTNDNLDLGCAVIEHAATDKAINTIDTEISQQLSLRKKHREGMG 1459

Query: 319  ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140
            +++FDA+ Y QG MG VPE LRPKPG+LS SQQRVYEDFV+ PWQNQSSQ          
Sbjct: 1460 STFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGAA 1519

Query: 139  XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLD 8
                           GP  GQ+N G YS     +G+  +++PLD
Sbjct: 1520 VQSATSGLTG---TNGPAPGQINPG-YSL---NTGYEGVSRPLD 1556