BLASTX nr result
ID: Coptis25_contig00020529
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020529 (500 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri... 186 2e-45 ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su... 171 4e-41 ref|XP_004155258.1| PREDICTED: CCR4-NOT transcription complex su... 168 4e-40 ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra... 168 4e-40 ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi... 167 6e-40 >ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis] gi|223548824|gb|EEF50313.1| ccr4-not transcription complex, putative [Ricinus communis] Length = 2330 Score = 186 bits (472), Expect = 2e-45 Identities = 98/165 (59%), Positives = 117/165 (70%) Frame = -2 Query: 499 QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320 Q L+ +S+LLE VQL TNDNLDLGCA +EQAAT+KA+QTID EI QL++RRKHR+GVG Sbjct: 1335 QGLNSTSDLLEHAVQLATNDNLDLGCAAIEQAATDKAIQTIDAEIAQQLSLRRKHRDGVG 1394 Query: 319 ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140 ++FDA+ Y+QG MGVVPE+LRPKPG LS SQQRVYEDFV+ PWQNQS Q Sbjct: 1395 PTFFDANLYSQGSMGVVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSGQGSHTIPMGSS 1454 Query: 139 XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLDL 5 AYG SGQLN G YSSA G GF A+++ LD+ Sbjct: 1455 TSAVSTALAG---AYGSGSGQLNPG-YSSAPGNVGFEAVSRTLDM 1495 >ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine max] Length = 2424 Score = 171 bits (434), Expect = 4e-41 Identities = 89/164 (54%), Positives = 114/164 (69%) Frame = -2 Query: 499 QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320 Q+L+I++ +LE VQLVTNDNLDLGCA++EQAAT+KA+ TID EIG QL++RRKHREG+G Sbjct: 1414 QNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMG 1473 Query: 319 ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140 +++FDA+ Y QG MG VPE LRPKPG+LS SQQRVYEDFV+ PWQNQSSQ Sbjct: 1474 STFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGVA 1533 Query: 139 XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLD 8 G SGQ+N G + +G+ +++PLD Sbjct: 1534 VQSGNTGLTG---TNGSVSGQINPGYPVT----TGYEGVSRPLD 1570 >ref|XP_004155258.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Cucumis sativus] Length = 634 Score = 168 bits (426), Expect = 4e-40 Identities = 90/164 (54%), Positives = 113/164 (68%) Frame = -2 Query: 499 QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320 Q+L ++S+LLE VQLVTNDNLDLGCA++EQAAT+KA+QTID EI QL++RRKHREGV Sbjct: 147 QNLGVASDLLEQAVQLVTNDNLDLGCAIIEQAATDKAIQTIDGEIAQQLSLRRKHREGVN 206 Query: 319 ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140 ++FD Y QGP+GVVPE+LRPKPG LS SQQRVYEDFV+ P QNQ+SQ Sbjct: 207 TTFFDTGMYAQGPLGVVPEALRPKPGHLSVSQQRVYEDFVRLPLQNQNSQ-----AAQST 261 Query: 139 XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLD 8 S +G +SGQLNSG S +G +++ +D Sbjct: 262 GSSVTASGTGLSNQFGLSSGQLNSGYTSGLV--TGLEGVSRSVD 303 >ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like [Cucumis sativus] Length = 2427 Score = 168 bits (426), Expect = 4e-40 Identities = 90/164 (54%), Positives = 113/164 (68%) Frame = -2 Query: 499 QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320 Q+L ++S+LLE VQLVTNDNLDLGCA++EQAAT+KA+QTID EI QL++RRKHREGV Sbjct: 1414 QNLGVASDLLEQAVQLVTNDNLDLGCAIIEQAATDKAIQTIDGEIAQQLSLRRKHREGVN 1473 Query: 319 ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140 ++FD Y QGP+GVVPE+LRPKPG LS SQQRVYEDFV+ P QNQ+SQ Sbjct: 1474 TTFFDTGMYAQGPLGVVPEALRPKPGHLSVSQQRVYEDFVRLPLQNQNSQ-----AAQST 1528 Query: 139 XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLD 8 S +G +SGQLNSG S +G +++ +D Sbjct: 1529 GSSVTASGTGLSNQFGLSSGQLNSGYTSGLV--TGLEGVSRSVD 1570 >ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula] gi|355520705|gb|AET01159.1| CCR4-NOT transcription complex subunit [Medicago truncatula] Length = 2410 Score = 167 bits (424), Expect = 6e-40 Identities = 88/164 (53%), Positives = 112/164 (68%) Frame = -2 Query: 499 QSLSISSNLLESPVQLVTNDNLDLGCALVEQAATEKALQTIDVEIGGQLAVRRKHREGVG 320 Q+L I++ +LE VQLVTNDNLDLGCA++E AAT+KA+ TID EI QL++R+KHREG+G Sbjct: 1400 QNLGIANEILEPAVQLVTNDNLDLGCAVIEHAATDKAINTIDTEISQQLSLRKKHREGMG 1459 Query: 319 ASYFDASTYTQGPMGVVPESLRPKPGRLSHSQQRVYEDFVKFPWQNQSSQXXXXXXXXXX 140 +++FDA+ Y QG MG VPE LRPKPG+LS SQQRVYEDFV+ PWQNQSSQ Sbjct: 1460 STFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGAA 1519 Query: 139 XXXXXXXXXXXSRAYGPTSGQLNSGIYSSAQGGSGFSAIAQPLD 8 GP GQ+N G YS +G+ +++PLD Sbjct: 1520 VQSATSGLTG---TNGPAPGQINPG-YSL---NTGYEGVSRPLD 1556