BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020525
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|2...   258   e-101
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...   257   2e-99
ref|XP_002514406.1| pentatricopeptide repeat-containing protein,...   254   1e-97
ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi...   257   2e-96
ref|XP_002875235.1| pentatricopeptide repeat-containing protein ...   255   1e-94

>ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|222837655|gb|EEE76020.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  258 bits (658), Expect(2) = e-101
 Identities = 127/171 (74%), Positives = 142/171 (83%)
 Frame = -3

Query: 516 GRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVL 337
           G +    RVF EMVTGDLVVW+SII GFAQN + DEAL LFKRMKRAGF A Q TLTSVL
Sbjct: 112 GELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVL 171

Query: 336 RACTGLVLLEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISW 157
           RACTGL LLE GRQVH HV+K+++DLI+NNA+LDMYCKCGSLEDA   F RM E+DVISW
Sbjct: 172 RACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISW 231

Query: 156 STMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDG 4
           STMI GLAQNG S EAL +FESMK  G  PNY+T+VGVLFACSHAGLV++G
Sbjct: 232 STMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG 282



 Score =  137 bits (345), Expect(2) = e-101
 Identities = 66/88 (75%), Positives = 75/88 (85%)
 Frame = -1

Query: 764 RNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDGLETLRQLHCS 585
           RNVVSWTTM+S Y   KL  +AL++LVLM REGV PNMFT+SS+LRACDGL  LRQLHC 
Sbjct: 29  RNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNLRQLHCC 88

Query: 584 IIKCGLDSDIFVRSALIDIYSKWGELGN 501
           IIK GLDSD+FVRSALID+YS+WGEL N
Sbjct: 89  IIKIGLDSDVFVRSALIDVYSRWGELEN 116



 Score =  104 bits (259), Expect = 2e-20
 Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 2/177 (1%)
 Frame = -3

Query: 525 LEMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLT 346
           ++ G + +   VF +M   ++V W ++I  ++     D+AL+    M R G   N  T +
Sbjct: 11  VKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYS 70

Query: 345 SVLRACTGLVLLEFGRQVHAHVIKF--ERDLIINNAILDMYCKCGSLEDAEFAFKRMSER 172
           SVLRAC GL  L   RQ+H  +IK   + D+ + +A++D+Y + G LE+A   F  M   
Sbjct: 71  SVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTG 127

Query: 171 DVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGR 1
           D++ WS++I G AQN    EAL +F+ MK +G      T+  VL AC+   L++ GR
Sbjct: 128 DLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGR 184



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
 Frame = -1

Query: 761 NVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDGLETL---RQLH 591
           ++V W+++++G+       EAL+    M+R G +    T +S+LRAC GL  L   RQ+H
Sbjct: 128 DLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVH 187

Query: 590 CSIIKCGLDSDIFVRSALIDIYSKWGELGNGFVFLVKWLQ 471
             ++K   D D+ + +AL+D+Y K G L +     V+ ++
Sbjct: 188 VHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVE 225



 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 28/73 (38%), Positives = 42/73 (57%)
 Frame = -3

Query: 249 NAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKASGPT 70
           N +++MY K G L DA+  F +M +R+V+SW+TMI+  +    + +AL+    M   G  
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 69  PNYITMVGVLFAC 31
           PN  T   VL AC
Sbjct: 64  PNMFTYSSVLRAC 76


>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  257 bits (656), Expect(2) = 2e-99
 Identities = 125/163 (76%), Positives = 143/163 (87%)
 Frame = -3

Query: 492 VFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRACTGLVL 313
           VF EM T DLVVWNSIIGGFAQN + +EAL+LFKRMKRAGF A+QATLTSVLRACTGL L
Sbjct: 209 VFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLAL 268

Query: 312 LEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITGLA 133
           LE GRQVH HV+KF++DLI+NNA++DMYCKCGSLEDA  AF RM E+DVISWSTM+ GLA
Sbjct: 269 LELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328

Query: 132 QNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDG 4
           QNG S +AL++FESMK SG  PNYIT++GVLFACSHAGLV+ G
Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKG 371



 Score =  132 bits (332), Expect(2) = 2e-99
 Identities = 65/88 (73%), Positives = 74/88 (84%)
 Frame = -1

Query: 764 RNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDGLETLRQLHCS 585
           RNVVSWTTM+S Y N KL  +ALK L+LM REGV PNMFT+SS+LRACDGL  LRQLHC 
Sbjct: 119 RNVVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCG 177

Query: 584 IIKCGLDSDIFVRSALIDIYSKWGELGN 501
           IIK GL+SD+FVRSALID+YSKW +L N
Sbjct: 178 IIKTGLESDVFVRSALIDVYSKWSDLDN 205



 Score =  103 bits (257), Expect(2) = 4e-24
 Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
 Frame = -3

Query: 492 VFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRACTGLVL 313
           +F EM   ++V W ++I  ++   N D+AL     M R G   N  T +SVLRAC GL  
Sbjct: 112 LFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPN 170

Query: 312 LEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITG 139
           L   RQ+H  +IK   E D+ + +A++D+Y K   L++A   F  M  RD++ W+++I G
Sbjct: 171 L---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGG 227

Query: 138 LAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGR 1
            AQN    EAL++F+ MK +G   +  T+  VL AC+   L++ GR
Sbjct: 228 FAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR 273



 Score = 34.3 bits (77), Expect(2) = 4e-24
 Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
 Frame = -1

Query: 734 SGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACD---GLETLRQLHCSIIKCGLD 564
           + +C+      A++ +  M+R GV  +  T+S L++ C     ++  +++H  I   G +
Sbjct: 28  ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87

Query: 563 SDIFVRSALIDIYSKWGEL 507
             +FV + L+++Y K+  L
Sbjct: 88  PKMFVVNTLLNMYVKFNLL 106



 Score = 61.2 bits (147), Expect(2) = 3e-19
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
 Frame = -3

Query: 516 GRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVL 337
           G + +    FS MV  D++ W++++ G AQNG   +AL+LF+ MK +G   N  T+  VL
Sbjct: 300 GSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVL 359

Query: 336 RACTGLVLLEFGRQVHAHVIKF---ERDLIINNAILDMYCKCGSLEDAEFAFKRMS-ERD 169
            AC+   L+E G      + K    +        ++D+  + G L++A      M  E D
Sbjct: 360 FACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPD 419

Query: 168 VISWSTMI 145
            ++W T++
Sbjct: 420 SVTWRTLL 427



 Score = 60.1 bits (144), Expect(2) = 3e-19
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = -1

Query: 764 RNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDGLETL---RQL 594
           R++V W +++ G+       EAL     M+R G + +  T +S+LRAC GL  L   RQ+
Sbjct: 216 RDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQV 275

Query: 593 HCSIIKCGLDSDIFVRSALIDIYSKWGEL 507
           H  ++K   D D+ + +ALID+Y K G L
Sbjct: 276 HVHVLK--FDQDLILNNALIDMYCKCGSL 302



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
 Frame = -3

Query: 435 FAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRACTGLVLLEFGRQVHAHVI--KFERD 262
           F    +   A+     M+R G  A+  T + +++ C+    ++ G++VH H+    +E  
Sbjct: 30  FCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89

Query: 261 LIINNAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKA 82
           + + N +L+MY K   LE+AE  F  M ER+V+SW+TMI+  + N  + +AL     M  
Sbjct: 90  MFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFR 148

Query: 81  SGPTPNYITMVGVLFACS--------HAGLVDDG 4
            G  PN  T   VL AC         H G++  G
Sbjct: 149 EGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTG 182


>ref|XP_002514406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546503|gb|EEF48002.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 436

 Score =  254 bits (650), Expect(2) = 1e-97
 Identities = 122/163 (74%), Positives = 139/163 (85%)
 Frame = -3

Query: 492 VFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRACTGLVL 313
           VF+EMVTGDL+VWNSII GFAQN + DEAL+LFK MKR GFPANQ+ LTSVLRACTGL L
Sbjct: 212 VFNEMVTGDLIVWNSIIAGFAQNNDGDEALNLFKSMKRNGFPANQSALTSVLRACTGLAL 271

Query: 312 LEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITGLA 133
           LE GRQVH HV K ++DL++NNA+LDMYCKCGSLEDA + F RM E+DVISWSTMI G A
Sbjct: 272 LELGRQVHVHVFKHDQDLVLNNALLDMYCKCGSLEDANYVFTRMVEKDVISWSTMIAGFA 331

Query: 132 QNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDG 4
           QNG S EAL +FESMK SG  PNYIT++GVLFACSHAGL++ G
Sbjct: 332 QNGYSREALKLFESMKVSGTKPNYITILGVLFACSHAGLLEAG 374



 Score =  128 bits (322), Expect(2) = 1e-97
 Identities = 62/93 (66%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = -1

Query: 764 RNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDGLETLRQLHCS 585
           RNVVSWTTM+S + N KL  +AL++L+ M REGV PN++T+SS+LRACDG+  LRQLH +
Sbjct: 121 RNVVSWTTMISAFSNAKLNDKALEFLICMLREGVKPNVYTYSSILRACDGVYNLRQLHGN 180

Query: 584 IIKCGLDSDIFVRSALIDIYSKWGELGNG-FVF 489
           IIK GLDSD++VRSALIDIYSKWGE  N  +VF
Sbjct: 181 IIKSGLDSDVYVRSALIDIYSKWGESENALYVF 213



 Score =  108 bits (269), Expect = 2e-21
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
 Frame = -3

Query: 510 IGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRA 331
           + E   +F +M   ++V W ++I  F+     D+AL+    M R G   N  T +S+LRA
Sbjct: 108 LDEALTLFDQMPERNVVSWTTMISAFSNAKLNDKALEFLICMLREGVKPNVYTYSSILRA 167

Query: 330 CTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISW 157
           C G+  L   RQ+H ++IK   + D+ + +A++D+Y K G  E+A + F  M   D+I W
Sbjct: 168 CDGVYNL---RQLHGNIIKSGLDSDVYVRSALIDIYSKWGESENALYVFNEMVTGDLIVW 224

Query: 156 STMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGR 1
           +++I G AQN    EAL++F+SMK +G   N   +  VL AC+   L++ GR
Sbjct: 225 NSIIAGFAQNNDGDEALNLFKSMKRNGFPANQSALTSVLRACTGLALLELGR 276



 Score = 60.1 bits (144), Expect(2) = 4e-17
 Identities = 32/72 (44%), Positives = 44/72 (61%)
 Frame = -3

Query: 516 GRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVL 337
           G + +   VF+ MV  D++ W+++I GFAQNG   EAL LF+ MK +G   N  T+  VL
Sbjct: 303 GSLEDANYVFTRMVEKDVISWSTMIAGFAQNGYSREALKLFESMKVSGTKPNYITILGVL 362

Query: 336 RACTGLVLLEFG 301
            AC+   LLE G
Sbjct: 363 FACSHAGLLEAG 374



 Score = 53.9 bits (128), Expect(2) = 4e-17
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
 Frame = -1

Query: 761 NVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDGLETL---RQLH 591
           +++ W ++++G+       EAL     M+R G   N    +S+LRAC GL  L   RQ+H
Sbjct: 220 DLIVWNSIIAGFAQNNDGDEALNLFKSMKRNGFPANQSALTSVLRACTGLALLELGRQVH 279

Query: 590 CSIIKCGLDSDIFVRSALIDIYSKWGEL 507
             + K   D D+ + +AL+D+Y K G L
Sbjct: 280 VHVFK--HDQDLVLNNALLDMYCKCGSL 305



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
 Frame = -3

Query: 435 FAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRACTGLVLLEFGRQVHAHVIK--FERD 262
           F    +   A+     M + G  A+  T + +++ C     +E G+QV+ H+    ++ +
Sbjct: 32  FCYQRDLPRAMKAMDAMHKHGIWADSFTYSELIKCCLARNAIEQGKQVYKHLSSNGYQPN 91

Query: 261 LIINNAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKA 82
           + + N +L+MY K   L++A   F +M ER+V+SW+TMI+  +    + +AL+    M  
Sbjct: 92  IFLINMLLNMYVKFNLLDEALTLFDQMPERNVVSWTTMISAFSNAKLNDKALEFLICMLR 151

Query: 81  SGPTPNYITMVGVLFAC 31
            G  PN  T   +L AC
Sbjct: 152 EGVKPNVYTYSSILRAC 168


>ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
           gi|449475689|ref|XP_004154524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  257 bits (656), Expect(2) = 2e-96
 Identities = 124/174 (71%), Positives = 148/174 (85%), Gaps = 1/174 (0%)
 Frame = -3

Query: 522 EMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTS 343
           ++G   +   VF+EM+TGDLVVWNSIIGGFAQN + DE L L+KRMKRA F A+Q+TLTS
Sbjct: 161 KLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTS 220

Query: 342 VLRACTGLVLLEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKR-MSERDV 166
           VLRACTGL LLE GRQVH HV+K+++DLI+NNA+LDMYCKCGSLEDA   F R M+E+DV
Sbjct: 221 VLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDV 280

Query: 165 ISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDG 4
           ISWSTMI GLAQNG S +AL +FE+MK+ GP PNYIT++GVLFACSHAGLV+DG
Sbjct: 281 ISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDG 334



 Score =  122 bits (305), Expect(2) = 2e-96
 Identities = 60/85 (70%), Positives = 70/85 (82%)
 Frame = -1

Query: 764 RNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDGLETLRQLHCS 585
           RNVVSWTTM+S Y N  L  +AL +L+LM REGV PNM+T+SS+LRACDGL  LRQLH S
Sbjct: 80  RNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHGS 139

Query: 584 IIKCGLDSDIFVRSALIDIYSKWGE 510
           I+K GL+SD+FVRSALID YSK GE
Sbjct: 140 ILKVGLESDVFVRSALIDTYSKLGE 164



 Score =  102 bits (253), Expect = 1e-19
 Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
 Frame = -3

Query: 525 LEMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLT 346
           ++ G + E   +F EM   ++V W ++I  ++ +    +ALD    M R G   N  T +
Sbjct: 62  VKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYS 121

Query: 345 SVLRACTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSER 172
           SVLRAC GL+ L   RQ+H  ++K   E D+ + +A++D Y K G   DA   F  M   
Sbjct: 122 SVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITG 178

Query: 171 DVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGR 1
           D++ W+++I G AQN    E L +++ MK +    +  T+  VL AC+   L++ GR
Sbjct: 179 DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGR 235



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
 Frame = -3

Query: 387 MKRAGFPANQATLTSVLRACTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGS 214
           M R    A+  T + +++ C     ++  R VH HV    +E    + N +++MY K G 
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66

Query: 213 LEDAEFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFA 34
           L++A   F  M +R+V+SW+TMI+  + +  + +ALD    M   G  PN  T   VL A
Sbjct: 67  LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126

Query: 33  C 31
           C
Sbjct: 127 C 127


>ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321073|gb|EFH51494.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 579

 Score =  255 bits (651), Expect(2) = 1e-94
 Identities = 122/173 (70%), Positives = 143/173 (82%)
 Frame = -3

Query: 522 EMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTS 343
           ++G   +   VF EMVTGD +VWNSIIGGFAQN   D AL+LFKRMKRAGF A QATLTS
Sbjct: 158 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 217

Query: 342 VLRACTGLVLLEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVI 163
           VLRACTGL LLE G Q H H++K+++DLI+NNA++DMYCKCGSLEDA   F +M ERDVI
Sbjct: 218 VLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVI 277

Query: 162 SWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDG 4
           +WSTMI+GLAQNG S EAL +FE MK+SG  PNYIT+VGVLFACSHAGL++DG
Sbjct: 278 TWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDG 330



 Score =  118 bits (295), Expect(2) = 1e-94
 Identities = 52/85 (61%), Positives = 72/85 (84%)
 Frame = -1

Query: 764 RNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDGLETLRQLHCS 585
           RNV+SWTTM+S Y  CK++ +AL+ LVLM R+GV PN++T+SS+LRAC+G+  +R LHC 
Sbjct: 77  RNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVRMLHCG 136

Query: 584 IIKCGLDSDIFVRSALIDIYSKWGE 510
           IIK GL+SD++VRSALID+++K GE
Sbjct: 137 IIKEGLESDVYVRSALIDVFAKLGE 161



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
 Frame = -3

Query: 510 IGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRA 331
           + +  ++F +M   +++ W ++I  +++     +AL+L   M R G   N  T +SVLRA
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123

Query: 330 CTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISW 157
           C G+  +   R +H  +IK   E D+ + +A++D++ K G  EDA   F  M   D I W
Sbjct: 124 CNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180

Query: 156 STMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDG 4
           +++I G AQN RS  AL++F+ MK +G      T+  VL AC+   L++ G
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 231



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
 Frame = -3

Query: 375 GFPANQATLTSVLRACTGLVLLEFGRQV--HAHVIKFERDLIINNAILDMYCKCGSLEDA 202
           G  A+ AT + +++ C     +  G  +  H +    +  + + N +++MY K   L DA
Sbjct: 8   GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67

Query: 201 EFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACS-- 28
              F +M +R+VISW+TMI+  ++     +AL++   M   G  PN  T   VL AC+  
Sbjct: 68  HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGM 127

Query: 27  ------HAGLVDDG 4
                 H G++ +G
Sbjct: 128 SDVRMLHCGIIKEG 141