BLASTX nr result
ID: Coptis25_contig00020522
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020522 (203 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|2... 84 1e-14 ref|XP_002336447.1| predicted protein [Populus trichocarpa] gi|2... 82 3e-14 ref|NP_001078002.1| uncharacterized protein [Arabidopsis thalian... 81 1e-13 gb|ABK28329.1| unknown [Arabidopsis thaliana] 81 1e-13 ref|NP_001078001.1| uncharacterized protein [Arabidopsis thalian... 81 1e-13 >ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|222870897|gb|EEF08028.1| predicted protein [Populus trichocarpa] Length = 98 Score = 84.0 bits (206), Expect = 1e-14 Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 12/74 (16%) Frame = +3 Query: 18 ATSCARSFLRSTTFRAA------------SKSARSPFQLPKQSPLSSRIFRSPVELSCAV 161 AT+ ARSFLRST R + SK A SPF++ K+SPLS RIFRSPVE+SC V Sbjct: 3 ATAAARSFLRSTATRTSAAARLASAPKPGSKPASSPFRISKESPLSHRIFRSPVEMSCCV 62 Query: 162 ETLLPFHTATASAL 203 ET+LP+HTATASAL Sbjct: 63 ETMLPYHTATASAL 76 >ref|XP_002336447.1| predicted protein [Populus trichocarpa] gi|222835040|gb|EEE73489.1| predicted protein [Populus trichocarpa] Length = 95 Score = 82.4 bits (202), Expect = 3e-14 Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 8/70 (11%) Frame = +3 Query: 18 ATSCARSFLRSTTF--------RAASKSARSPFQLPKQSPLSSRIFRSPVELSCAVETLL 173 AT+ +RSFLRST+ +A SK A SPF++ KQSP S RIFRSPVE+SC VET+L Sbjct: 3 ATAASRSFLRSTSAAARMASAQKAGSKPAFSPFRISKQSPFSPRIFRSPVEMSCCVETML 62 Query: 174 PFHTATASAL 203 P+HTAT+SAL Sbjct: 63 PYHTATSSAL 72 >ref|NP_001078002.1| uncharacterized protein [Arabidopsis thaliana] gi|330253803|gb|AEC08897.1| uncharacterized protein [Arabidopsis thaliana] Length = 89 Score = 80.9 bits (198), Expect = 1e-13 Identities = 46/70 (65%), Positives = 49/70 (70%), Gaps = 10/70 (14%) Frame = +3 Query: 24 SCARSFLRSTTFRAA----------SKSARSPFQLPKQSPLSSRIFRSPVELSCAVETLL 173 S ARS RS RAA SARS F+LPKQSPLS RIFRSPVELSC VET+L Sbjct: 2 SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61 Query: 174 PFHTATASAL 203 P+HTATASAL Sbjct: 62 PYHTATASAL 71 >gb|ABK28329.1| unknown [Arabidopsis thaliana] Length = 94 Score = 80.9 bits (198), Expect = 1e-13 Identities = 46/70 (65%), Positives = 49/70 (70%), Gaps = 10/70 (14%) Frame = +3 Query: 24 SCARSFLRSTTFRAA----------SKSARSPFQLPKQSPLSSRIFRSPVELSCAVETLL 173 S ARS RS RAA SARS F+LPKQSPLS RIFRSPVELSC VET+L Sbjct: 2 SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61 Query: 174 PFHTATASAL 203 P+HTATASAL Sbjct: 62 PYHTATASAL 71 >ref|NP_001078001.1| uncharacterized protein [Arabidopsis thaliana] gi|98961761|gb|ABF59210.1| unknown protein [Arabidopsis thaliana] gi|330253802|gb|AEC08896.1| uncharacterized protein [Arabidopsis thaliana] Length = 93 Score = 80.9 bits (198), Expect = 1e-13 Identities = 46/70 (65%), Positives = 49/70 (70%), Gaps = 10/70 (14%) Frame = +3 Query: 24 SCARSFLRSTTFRAA----------SKSARSPFQLPKQSPLSSRIFRSPVELSCAVETLL 173 S ARS RS RAA SARS F+LPKQSPLS RIFRSPVELSC VET+L Sbjct: 2 SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61 Query: 174 PFHTATASAL 203 P+HTATASAL Sbjct: 62 PYHTATASAL 71