BLASTX nr result

ID: Coptis25_contig00020517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020517
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18028.3| unnamed protein product [Vitis vinifera]              181   4e-43
ref|XP_002272504.1| PREDICTED: probable WRKY transcription facto...   181   4e-43
emb|CAN66487.1| hypothetical protein VITISV_015394 [Vitis vinifera]   180   7e-43
gb|ACY69975.1| WRKY transcription factor [Vitis pseudoreticulata]     176   2e-41
ref|XP_002309186.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-41

>emb|CBI18028.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  181 bits (459), Expect = 4e-43
 Identities = 103/251 (41%), Positives = 145/251 (57%)
 Frame = +2

Query: 107 SSMECSTVSENMSSDRKKAIEKLIEGRDSATQLQILLQNKKPLDVLEMAKAEAFVMKIIG 286
           S+MEC T SE +S DRK+AI++L+ GR    QL+ +L     L   +   A+  ++KI  
Sbjct: 45  STMEC-TWSEKISGDRKRAIDELLRGRSFTKQLRSVL-----LGGDQQESAQDLLVKISR 98

Query: 287 SFPNAISVMSSDVNAMDMCQSPMTAEATSTFTDDGKCVDPNDRRKILAVKDRRGGYKRRK 466
           SF + +S+++S  +   + Q P + +  S      +  +  +  K  + KDRRG YKRRK
Sbjct: 99  SFTDTLSILNSGESDEAVSQIPASGQLYSPGWHGRRSEESCESGKS-STKDRRGCYKRRK 157

Query: 467 NVNSWVTTSPKPIDDGHAWRKYGQKEILSSKFPRNYFRCTHKTDQGCQAMKQVQQTEDDP 646
           N  SW+  +P   DDG+AWRKYGQK IL++K  R+Y+RCTHK DQGC A KQVQ TE++P
Sbjct: 158 NSQSWIRITPNFHDDGYAWRKYGQKVILNAKHQRSYYRCTHKHDQGCMATKQVQMTEEEP 217

Query: 647 PMFKITYIGHHTCTDPLKSPQLILXXXXXXXXXXXXLFNAESTFATGPNKDDYRPFFDSF 826
           PM+K TY G HTC   LKS Q+++             F +        N+DD   FF SF
Sbjct: 218 PMYKTTYHGQHTCKSMLKSSQIMVENSTARDSSILLSFESN-------NQDDSNAFFSSF 270

Query: 827 PSFKLENKLDN 859
           P  K E ++ N
Sbjct: 271 PLIKQEEEIPN 281


>ref|XP_002272504.1| PREDICTED: probable WRKY transcription factor 70-like [Vitis
           vinifera]
          Length = 322

 Score =  181 bits (459), Expect = 4e-43
 Identities = 103/251 (41%), Positives = 145/251 (57%)
 Frame = +2

Query: 107 SSMECSTVSENMSSDRKKAIEKLIEGRDSATQLQILLQNKKPLDVLEMAKAEAFVMKIIG 286
           S+MEC T SE +S DRK+AI++L+ GR    QL+ +L     L   +   A+  ++KI  
Sbjct: 10  STMEC-TWSEKISGDRKRAIDELLRGRSFTKQLRSVL-----LGGDQQESAQDLLVKISR 63

Query: 287 SFPNAISVMSSDVNAMDMCQSPMTAEATSTFTDDGKCVDPNDRRKILAVKDRRGGYKRRK 466
           SF + +S+++S  +   + Q P + +  S      +  +  +  K  + KDRRG YKRRK
Sbjct: 64  SFTDTLSILNSGESDEAVSQIPASGQLYSPGWHGRRSEESCESGKS-STKDRRGCYKRRK 122

Query: 467 NVNSWVTTSPKPIDDGHAWRKYGQKEILSSKFPRNYFRCTHKTDQGCQAMKQVQQTEDDP 646
           N  SW+  +P   DDG+AWRKYGQK IL++K  R+Y+RCTHK DQGC A KQVQ TE++P
Sbjct: 123 NSQSWIRITPNFHDDGYAWRKYGQKVILNAKHQRSYYRCTHKHDQGCMATKQVQMTEEEP 182

Query: 647 PMFKITYIGHHTCTDPLKSPQLILXXXXXXXXXXXXLFNAESTFATGPNKDDYRPFFDSF 826
           PM+K TY G HTC   LKS Q+++             F +        N+DD   FF SF
Sbjct: 183 PMYKTTYHGQHTCKSMLKSSQIMVENSTARDSSILLSFESN-------NQDDSNAFFSSF 235

Query: 827 PSFKLENKLDN 859
           P  K E ++ N
Sbjct: 236 PLIKQEEEIPN 246


>emb|CAN66487.1| hypothetical protein VITISV_015394 [Vitis vinifera]
          Length = 719

 Score =  180 bits (457), Expect = 7e-43
 Identities = 102/251 (40%), Positives = 143/251 (56%)
 Frame = +2

Query: 107  SSMECSTVSENMSSDRKKAIEKLIEGRDSATQLQILLQNKKPLDVLEMAKAEAFVMKIIG 286
            S+MEC T SE +S DRK+AI++L+ GR    QL+ +L     L   +    +  + KI  
Sbjct: 407  STMEC-TWSEKISGDRKRAIDELLRGRSFTKQLRSVL-----LGGXQQESXQDLLXKIXR 460

Query: 287  SFPNAISVMSSDVNAMDMCQSPMTAEATSTFTDDGKCVDPNDRRKILAVKDRRGGYKRRK 466
            SF + +S+++S  +   + Q P + +  S      +  +  +  K  + KDRRG YKRRK
Sbjct: 461  SFTDTLSILNSGESDEXVSQIPASGQLYSPGWHGRRSEESCESGKS-STKDRRGCYKRRK 519

Query: 467  NVNSWVTTSPKPIDDGHAWRKYGQKEILSSKFPRNYFRCTHKTDQGCQAMKQVQQTEDDP 646
            N  SW+  +P   DDG+AWRKYGQK IL++K  R+Y+RCTHK DQGC A KQVQ TE++P
Sbjct: 520  NSQSWIRITPNFHDDGYAWRKYGQKVILNAKHQRSYYRCTHKHDQGCMATKQVQMTEEEP 579

Query: 647  PMFKITYIGHHTCTDPLKSPQLILXXXXXXXXXXXXLFNAESTFATGPNKDDYRPFFDSF 826
            PM+K TY G HTC   LKS Q+++             F +        N+DD   FF SF
Sbjct: 580  PMYKTTYHGQHTCKSMLKSSQIMVENSTARDSSILLSFESN-------NQDDSNAFFSSF 632

Query: 827  PSFKLENKLDN 859
            P  K E ++ N
Sbjct: 633  PLIKQEEEIPN 643


>gb|ACY69975.1| WRKY transcription factor [Vitis pseudoreticulata]
          Length = 322

 Score =  176 bits (445), Expect = 2e-41
 Identities = 101/251 (40%), Positives = 143/251 (56%)
 Frame = +2

Query: 107 SSMECSTVSENMSSDRKKAIEKLIEGRDSATQLQILLQNKKPLDVLEMAKAEAFVMKIIG 286
           S+MEC T SE +S DRK+AI++L+ GR    QL+ +L         +   A+  + KI+ 
Sbjct: 10  STMEC-TWSEKISGDRKRAIDELLRGRSFTKQLRSVLVGGD-----QQESAQDLLAKILR 63

Query: 287 SFPNAISVMSSDVNAMDMCQSPMTAEATSTFTDDGKCVDPNDRRKILAVKDRRGGYKRRK 466
           SF + +S+++S  +   + Q P + +  S      +  +  +  K  + KDRRG YKRRK
Sbjct: 64  SFNDTLSILNSGESNEVVSQIPASGQLYSPGWHGRRSEESCESGKS-STKDRRGCYKRRK 122

Query: 467 NVNSWVTTSPKPIDDGHAWRKYGQKEILSSKFPRNYFRCTHKTDQGCQAMKQVQQTEDDP 646
           N  S +  +P   DDG+AWRKYGQK IL++K  R+Y+RCTHK DQGC A KQVQ TE++P
Sbjct: 123 NSQSLIRITPNFHDDGYAWRKYGQKVILNAKHQRSYYRCTHKHDQGCMATKQVQMTEEEP 182

Query: 647 PMFKITYIGHHTCTDPLKSPQLILXXXXXXXXXXXXLFNAESTFATGPNKDDYRPFFDSF 826
           PM+K TY G HTC   LKS Q+++             F +        N+DD   FF SF
Sbjct: 183 PMYKTTYHGQHTCKSMLKSSQIMVENSTARDSSILLSFESN-------NQDDSNAFFSSF 235

Query: 827 PSFKLENKLDN 859
           P  K E ++ N
Sbjct: 236 PLIKQEEEIPN 246


>ref|XP_002309186.1| predicted protein [Populus trichocarpa] gi|222855162|gb|EEE92709.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  174 bits (441), Expect = 5e-41
 Identities = 105/256 (41%), Positives = 146/256 (57%), Gaps = 10/256 (3%)
 Frame = +2

Query: 122 STVSENMSSDRKKAIEKLIEGRDSATQLQILLQNKKPLDVLEMAKAEAFVMKIIGSFPNA 301
           S+  EN+ S RKK I++L+ G++ A +L+ ++      D      AE  V +I+ SF + 
Sbjct: 3   SSWPENLPSHRKKVIDELLRGQEIAKKLKFVMSKSTGND--GSMSAENLVREIMNSFNST 60

Query: 302 ISVMSSDVNAMDMCQSPMTAEATSTFTDDGKCV-DPNDRRKILA---VKDRRGGYKRRKN 469
           +S+++      D+ Q+P T +  S   D  K   D  +  K  A   VKDRRG YKRR++
Sbjct: 61  LSILNGGGYDDDVSQTPATTKVCSPLWDGRKSSEDSGESSKSTATVKVKDRRGCYKRRRS 120

Query: 470 VNSWVTTSPKPIDDGHAWRKYGQKEILSSKFPRNYFRCTHKTDQGCQAMKQVQQTEDDPP 649
            +SW   +    DDGHAWRKYGQK IL++KFPRNY+RCTHK DQ CQA KQVQ+ ED+PP
Sbjct: 121 SHSWTNETSTLTDDGHAWRKYGQKMILNAKFPRNYYRCTHKFDQHCQATKQVQRVEDEPP 180

Query: 650 MFKITYIGHHTCTDPLK-SPQLILXXXXXXXXXXXXLF---NAESTFATGPNKDDYRPFF 817
           +++ TY G+HTC + LK S Q +L            L    N+ +      NK ++  F 
Sbjct: 181 LYRTTYHGYHTCKNLLKASDQFVLDPIDHFHTDSSTLLSFNNSSNHHQMMTNKQNHPFFT 240

Query: 818 DSFPSFKLE--NKLDN 859
            SF S K E  NK DN
Sbjct: 241 TSFQSIKQEYYNKEDN 256


Top