BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020514
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...    85   5e-15
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002520025.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9...    69   5e-10
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]     69   5e-10

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
 Frame = +2

Query: 8   RLQDQETAPHKKIQLRKTIAQYFSSTSFMGLNHGSVSKEHISSVKTPNINTEDLDSREVN 187
           +L+DQ+  P   + LRK +AQ+FSS++F+    G+ +KEH+ S   PN+ + DLDS   N
Sbjct: 280 KLRDQDITPRNFVHLRKALAQFFSSSTFVKEKCGNTTKEHLVSSVPPNMPSTDLDSTLPN 339

Query: 188 LVLLPQESR-*TTGAQYESFVSMLGNLRDQVLSMN 289
           L L+P +S+  +  AQYES+ SML  LRDQVLSMN
Sbjct: 340 LFLVPCKSKVDSPRAQYESYTSMLWKLRDQVLSMN 374


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
 Frame = +2

Query: 8   RLQDQETAPHKKIQLRKTIAQYFSSTSFMGLNHGSVSKEHISSVKTPNINTEDLDSREVN 187
           +LQD++  P   ++LRK +AQYFSS+SF+    GS+ KE IS     N +  D DS+ +N
Sbjct: 269 KLQDKDFTPCNFVELRKELAQYFSSSSFIKEKGGSMEKEQISYSVPSNSHDNDPDSKSIN 328

Query: 188 LVLLP-QESR*TTGAQYESFVSMLGNLRDQVLSMN 289
           L ++P ++   +  AQY+S++S L  LRDQVLSMN
Sbjct: 329 LFVIPLKDKDDSLKAQYKSYISALWKLRDQVLSMN 363


>ref|XP_002520025.1| conserved hypothetical protein [Ricinus communis]
           gi|223540789|gb|EEF42349.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
 Frame = +2

Query: 8   RLQDQETAPHKKIQLRKTIAQYFSSTSFMGLNHGSVSKEHISSVKTPNINTEDLDSREVN 187
           + Q Q   P   +QLRK +AQYFSS+SFM    G++ KE++ S       + DL S  ++
Sbjct: 199 KFQGQNFTPLNLMQLRKALAQYFSSSSFMREKCGNLGKENLISSTVSTTKSNDLHSTPLS 258

Query: 188 LVLLPQESR-*TTGAQYESFVSMLGNLRDQVLSMN 289
           L+L+P +++     AQ+ES++S L  LRD+VLSMN
Sbjct: 259 LILIPSKNKDDMPRAQHESYISALWKLRDEVLSMN 293


>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
          Length = 411

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = +2

Query: 8   RLQDQETAPHKKIQLRKTIAQYFSSTSFMGLNHGSVSKEHISSVKTPNINTEDLDSREVN 187
           ++QD++  P   +QL++  A YF ++SFMG     V  E + S   P+    D+D  +  
Sbjct: 272 KVQDRDLVPQNILQLKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRR 331

Query: 188 LVLLPQESR-*TTGAQYESFVSMLGNLRDQVLSMN 289
           L+L+P  ++  +T  QYESF   L  LRDQVLSMN
Sbjct: 332 LLLIPNRNKDDSTRGQYESFNLALWKLRDQVLSMN 366


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = +2

Query: 8   RLQDQETAPHKKIQLRKTIAQYFSSTSFMGLNHGSVSKEHISSVKTPNINTEDLDSREVN 187
           ++QD++  P   +QL++  A YF ++SFMG     V  E + S   P+    D+D  +  
Sbjct: 273 KVQDRDLVPQNILQLKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRR 332

Query: 188 LVLLPQESR-*TTGAQYESFVSMLGNLRDQVLSMN 289
           L+L+P  ++  +T  QYESF   L  LRDQVLSMN
Sbjct: 333 LLLIPNRNKDDSTRGQYESFNLALWKLRDQVLSMN 367