BLASTX nr result

ID: Coptis25_contig00020509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020509
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis ...   105   8e-35
emb|CAN77008.1| hypothetical protein VITISV_036876 [Vitis vinifera]   105   8e-35
ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-33
ref|XP_002526027.1| Prolactin regulatory element-binding protein...   101   2e-32
ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-32

>ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis vinifera]
          Length = 394

 Score =  105 bits (261), Expect(2) = 8e-35
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = +3

Query: 264 YRMAVHPGGDGVICSFPKSCRWFEWDVPESSETYKLDLKSSEKILTQMEDVGQQLAMTFN 443
           YRMAVHPGG+G+ICS PKSC+WF+WD  ++ E +K  LK SEK+LT +EDVGQQLA+TFN
Sbjct: 106 YRMAVHPGGEGLICSLPKSCKWFQWDEIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFN 165

Query: 444 ADGSALA 464
            DGS LA
Sbjct: 166 NDGSMLA 172



 Score = 67.0 bits (162), Expect(2) = 8e-35
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +2

Query: 50  LVLCGGGGEGKSGIPNSILLSLFXXXXXXXXXXXXXKIGTGADLPYRMAVHP 205
           LV CGGGGEG+SGIPN++LL+ F             K+G GADLPYRMAVHP
Sbjct: 61  LVFCGGGGEGRSGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHP 112


>emb|CAN77008.1| hypothetical protein VITISV_036876 [Vitis vinifera]
          Length = 369

 Score =  105 bits (261), Expect(2) = 8e-35
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = +3

Query: 264 YRMAVHPGGDGVICSFPKSCRWFEWDVPESSETYKLDLKSSEKILTQMEDVGQQLAMTFN 443
           YRMAVHPGG+G+ICS PKSC+WF+WD  ++ E +K  LK SEK+LT +EDVGQQLA+TFN
Sbjct: 106 YRMAVHPGGEGLICSLPKSCKWFQWDEIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFN 165

Query: 444 ADGSALA 464
            DGS LA
Sbjct: 166 NDGSMLA 172



 Score = 67.0 bits (162), Expect(2) = 8e-35
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +2

Query: 50  LVLCGGGGEGKSGIPNSILLSLFXXXXXXXXXXXXXKIGTGADLPYRMAVHP 205
           LV CGGGGEG+SGIPN++LL+ F             K+G GADLPYRMAVHP
Sbjct: 61  LVFCGGGGEGRSGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHP 112


>ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|222852263|gb|EEE89810.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  105 bits (263), Expect(2) = 4e-33
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = +3

Query: 264 YRMAVHPGGDGVICSFPKSCRWFEWDVPESSETYKLDLKSSEKILTQMEDVGQQLAMTFN 443
           YRM VHPGGDG+IC+ P SCR+FEWD  E +E +KL LKSSEK+LTQ+EDVGQQLA+ FN
Sbjct: 98  YRMVVHPGGDGLICALPNSCRFFEWDEVEDNEDHKLGLKSSEKVLTQLEDVGQQLALVFN 157

Query: 444 ADGSALA 464
           +D S LA
Sbjct: 158 SDSSVLA 164



 Score = 60.5 bits (145), Expect(2) = 4e-33
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = +2

Query: 50  LVLCGGGGEGKSGIPNSILLSLFXXXXXXXXXXXXXKIGTGADLPYRMAVHP 205
           ++L GGGGEG+SGIPN++LLS F             K+  G+DLPYRM VHP
Sbjct: 53  VILAGGGGEGRSGIPNAVLLSRFDFSSNSLSPQPVPKLNLGSDLPYRMVVHP 104


>ref|XP_002526027.1| Prolactin regulatory element-binding protein, putative [Ricinus
           communis] gi|223534674|gb|EEF36367.1| Prolactin
           regulatory element-binding protein, putative [Ricinus
           communis]
          Length = 390

 Score =  101 bits (251), Expect(2) = 2e-32
 Identities = 44/67 (65%), Positives = 55/67 (82%)
 Frame = +3

Query: 264 YRMAVHPGGDGVICSFPKSCRWFEWDVPESSETYKLDLKSSEKILTQMEDVGQQLAMTFN 443
           YRM VHPGGDG++C+ P SCR+FEWD  + +E +KL LK SEK LTQ+EDVGQQLA+ FN
Sbjct: 99  YRMVVHPGGDGLVCALPNSCRFFEWDEVKDNEAHKLGLKESEKALTQLEDVGQQLALAFN 158

Query: 444 ADGSALA 464
           ++ SALA
Sbjct: 159 SESSALA 165



 Score = 62.8 bits (151), Expect(2) = 2e-32
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 50  LVLCGGGGEGKSGIPNSILLSLFXXXXXXXXXXXXXKIGTGADLPYRMAVHP 205
           ++L GGGGEG+SGIPN+++LS F             K+GTG+DLPYRM VHP
Sbjct: 54  VLLAGGGGEGRSGIPNALVLSRFDFTFNSLSPQPVAKLGTGSDLPYRMVVHP 105


>ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|222863844|gb|EEF00975.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  103 bits (256), Expect(2) = 3e-32
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = +3

Query: 264 YRMAVHPGGDGVICSFPKSCRWFEWDVPESSETYKLDLKSSEKILTQMEDVGQQLAMTFN 443
           YRM VHPGGDGVIC+FP SCR+F+WD  + +E +KL LK S+K+LTQ+EDVGQQLA+ FN
Sbjct: 114 YRMVVHPGGDGVICAFPSSCRFFDWDEVKDNEDHKLGLKPSKKVLTQLEDVGQQLALAFN 173

Query: 444 ADGSALA 464
           +D S LA
Sbjct: 174 SDSSVLA 180



 Score = 60.5 bits (145), Expect(2) = 3e-32
 Identities = 28/52 (53%), Positives = 33/52 (63%)
 Frame = +2

Query: 50  LVLCGGGGEGKSGIPNSILLSLFXXXXXXXXXXXXXKIGTGADLPYRMAVHP 205
           +VL GGGGEG SGIPN++LLS F             K+G G+ LPYRM VHP
Sbjct: 69  VVLAGGGGEGSSGIPNAVLLSCFDFSSNSLASQPVAKLGLGSQLPYRMVVHP 120


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