BLASTX nr result

ID: Coptis25_contig00020507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020507
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265233.1| PREDICTED: uncharacterized protein LOC100256...   155   3e-36
ref|XP_003601527.1| hypothetical protein MTR_3g082680 [Medicago ...   148   5e-34
ref|XP_002532211.1| conserved hypothetical protein [Ricinus comm...   147   7e-34
ref|NP_178517.2| uncharacterized protein [Arabidopsis thaliana] ...   144   7e-33
gb|AAD25842.1| hypothetical protein [Arabidopsis thaliana] gi|20...   144   7e-33

>ref|XP_002265233.1| PREDICTED: uncharacterized protein LOC100256200 [Vitis vinifera]
           gi|296085052|emb|CBI28467.3| unnamed protein product
           [Vitis vinifera]
          Length = 327

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/113 (66%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   WPLNFLESKXXXXXXXXXXXXXXXXXXXXNADVWTEFYQYCRESKFIHVTSLDFTLLSTF 180
           WPLNFLESK                    + D W EFYQY RESKFIH+TSLDFTLLS F
Sbjct: 211 WPLNFLESKITAGISLAAGLGIIIYAGLASGDDWKEFYQYYRESKFIHITSLDFTLLSAF 270

Query: 181 APFWVYNDMTARKWTNKGSWILPLTVIPFLGPALYLLLRPPLSAVPVS-SPTT 336
           APFWVYNDMTARKW +KGSW+LPL+++PFLGPALYLLLRP LSA+PVS SP++
Sbjct: 271 APFWVYNDMTARKWYDKGSWLLPLSLVPFLGPALYLLLRPSLSAMPVSLSPSS 323


>ref|XP_003601527.1| hypothetical protein MTR_3g082680 [Medicago truncatula]
           gi|357469945|ref|XP_003605257.1| hypothetical protein
           MTR_4g027220 [Medicago truncatula]
           gi|355490575|gb|AES71778.1| hypothetical protein
           MTR_3g082680 [Medicago truncatula]
           gi|355506312|gb|AES87454.1| hypothetical protein
           MTR_4g027220 [Medicago truncatula]
          Length = 324

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/115 (59%), Positives = 80/115 (69%)
 Frame = +1

Query: 1   WPLNFLESKXXXXXXXXXXXXXXXXXXXXNADVWTEFYQYCRESKFIHVTSLDFTLLSTF 180
           WPLNFLESK                      DVW EF+QYCRESKFIH+TS+DFTLLST 
Sbjct: 210 WPLNFLESKITAMILLASGIGIIIYAGLAGEDVWKEFFQYCRESKFIHITSIDFTLLSTL 269

Query: 181 APFWVYNDMTARKWTNKGSWILPLTVIPFLGPALYLLLRPPLSAVPVSSPTTKGD 345
           APFWVYNDMTARKW +KGSW+LP+++IP LGPALY+LLRP LS   V+    + +
Sbjct: 270 APFWVYNDMTARKWFDKGSWLLPVSLIPLLGPALYILLRPSLSTSAVAQSPAESE 324


>ref|XP_002532211.1| conserved hypothetical protein [Ricinus communis]
           gi|223528107|gb|EEF30180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/114 (61%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = +1

Query: 1   WPLNFLESKXXXXXXXXXXXXXXXXXXXXNADVWTEFYQYCRESKFIHVTSLDFTLLSTF 180
           WPLNFLESK                    N DVW EFYQY + SKFIH+ SLDF LLS F
Sbjct: 216 WPLNFLESKLTAGISLAAGLGLFLYAGLANGDVWKEFYQYVQGSKFIHIMSLDFALLSAF 275

Query: 181 APFWVYNDMTARKWTNKGSWILPLTVIPFLGPALYLLLRPPLSAVPVS-SPTTK 339
           APFWVYNDMTARKW + GSW+LP++++PFLGPALYL+LRP LS +PVS SPT++
Sbjct: 276 APFWVYNDMTARKWYDTGSWLLPISLVPFLGPALYLVLRPSLSEMPVSVSPTSE 329


>ref|NP_178517.2| uncharacterized protein [Arabidopsis thaliana]
           gi|89000921|gb|ABD59050.1| At2g04360 [Arabidopsis
           thaliana] gi|330250730|gb|AEC05824.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 320

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/115 (60%), Positives = 76/115 (66%)
 Frame = +1

Query: 1   WPLNFLESKXXXXXXXXXXXXXXXXXXXXNADVWTEFYQYCRESKFIHVTSLDFTLLSTF 180
           WPLN LESK                    NA  WTEFYQY RESKFIHVTSLDF LLS F
Sbjct: 203 WPLNVLESKVTAGVTLVAGLGIILYSVVGNAGDWTEFYQYFRESKFIHVTSLDFCLLSAF 262

Query: 181 APFWVYNDMTARKWTNKGSWILPLTVIPFLGPALYLLLRPPLSAVPVSSPTTKGD 345
           APFWVYNDMT RKW +KGSW+LP++VIPFLGP+LYLLLRP +S       T   D
Sbjct: 263 APFWVYNDMTTRKWFDKGSWLLPVSVIPFLGPSLYLLLRPAVSETIAPKDTASSD 317


>gb|AAD25842.1| hypothetical protein [Arabidopsis thaliana]
           gi|20198208|gb|AAM15461.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 295

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/115 (60%), Positives = 76/115 (66%)
 Frame = +1

Query: 1   WPLNFLESKXXXXXXXXXXXXXXXXXXXXNADVWTEFYQYCRESKFIHVTSLDFTLLSTF 180
           WPLN LESK                    NA  WTEFYQY RESKFIHVTSLDF LLS F
Sbjct: 178 WPLNVLESKVTAGVTLVAGLGIILYSVVGNAGDWTEFYQYFRESKFIHVTSLDFCLLSAF 237

Query: 181 APFWVYNDMTARKWTNKGSWILPLTVIPFLGPALYLLLRPPLSAVPVSSPTTKGD 345
           APFWVYNDMT RKW +KGSW+LP++VIPFLGP+LYLLLRP +S       T   D
Sbjct: 238 APFWVYNDMTTRKWFDKGSWLLPVSVIPFLGPSLYLLLRPAVSETIAPKDTASSD 292


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