BLASTX nr result

ID: Coptis25_contig00020503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020503
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250...   111   5e-23
emb|CBI20307.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253...   111   7e-23
emb|CBI23965.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260...   110   2e-22

>ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera]
          Length = 932

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/120 (49%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
 Frame = +3

Query: 6   LPEFMSFSELQCS-DEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVA 182
           LP+F+S +E QCS DE+RL+++++F N+S+  YR    PST L+GEG W+ + N L +VA
Sbjct: 286 LPQFISITEFQCSEDEERLQVMVKFQNSSYDYYR-TYNPSTTLIGEGSWDVNKNQLCLVA 344

Query: 183 CRFLNYTDSLANISGGDCLIRLSVWY--------RSSVVEQIWSNKTSNESGYFDKIVFQ 338
           CR LN  DSL +   GDC I+LS+ +        RS+VV QIWS+KT N+ G+F KI+FQ
Sbjct: 345 CRILNEGDSLVDARIGDCSIKLSLRFPAILSIRNRSTVVGQIWSDKTVNDPGFFSKIMFQ 404


>emb|CBI20307.3| unnamed protein product [Vitis vinifera]
          Length = 1709

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/120 (49%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
 Frame = +3

Query: 6    LPEFMSFSELQCS-DEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVA 182
            LP+F+S +E QCS DE+RL+++++F N+S+  YR    PST L+GEG W+ + N L +VA
Sbjct: 1121 LPQFISITEFQCSEDEERLQVMVKFQNSSYDYYR-TYNPSTTLIGEGSWDVNKNQLCLVA 1179

Query: 183  CRFLNYTDSLANISGGDCLIRLSVWY--------RSSVVEQIWSNKTSNESGYFDKIVFQ 338
            CR LN  DSL +   GDC I+LS+ +        RS+VV QIWS+KT N+ G+F KI+FQ
Sbjct: 1180 CRILNEGDSLVDARIGDCSIKLSLRFPAILSIRNRSTVVGQIWSDKTVNDPGFFSKIMFQ 1239



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/120 (42%), Positives = 71/120 (59%), Gaps = 9/120 (7%)
 Frame = +3

Query: 6   LPEFMSFSELQCSD-EQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVA 182
           LP  +S   +QCS+ E+R  +L++F +  H        P+  LVGEG W+   + L +VA
Sbjct: 273 LPHIISTEVIQCSEYERRSLVLVKFQSDEHY---QPFHPNMTLVGEGWWDAKKSRLSVVA 329

Query: 183 CRFLNYTDSLANISGGDCLIRLSVWYR--------SSVVEQIWSNKTSNESGYFDKIVFQ 338
           CR  N  +SLAN   GDC +RLS+ +         S ++ QIWSNKT NESGYF++I FQ
Sbjct: 330 CRLSNLKNSLANAQVGDCSVRLSLRFNTIWSIRNMSMMLGQIWSNKTVNESGYFERIAFQ 389


>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
          Length = 708

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 8/118 (6%)
 Frame = +3

Query: 9   PEFMSFSELQCSDEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVACR 188
           P+FMSF +++C D+ ++ +L+RFSN+S  ++R  + P   LV EG WN   N L++VACR
Sbjct: 73  PKFMSFDQVECQDDGKVHMLLRFSNSSSHLFRTFI-PDKTLVAEGAWNKKKNQLYVVACR 131

Query: 189 FLNYTDSLANISGGDCLIRL--------SVWYRSSVVEQIWSNKTSNESGYFDKIVFQ 338
            LN  +SLA++  GDC I+L        S+  RS++V QIWSN+T N+ GYF +IVFQ
Sbjct: 132 ILNVANSLADVFVGDCSIKLNLRFPATMSIKNRSTIVGQIWSNRTVNDLGYFGRIVFQ 189


>emb|CBI23965.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 8/118 (6%)
 Frame = +3

Query: 9   PEFMSFSELQCSDEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVACR 188
           P+FMSF +++C D+ ++ +L+RFSN+S  ++R  + P   LV EG WN   N L++VACR
Sbjct: 147 PKFMSFDQVECQDDGKVHMLLRFSNSSSHLFRTFI-PDKTLVAEGAWNKKKNQLYVVACR 205

Query: 189 FLNYTDSLANISGGDCLIRL--------SVWYRSSVVEQIWSNKTSNESGYFDKIVFQ 338
            LN  +SLA++  GDC I+L        S+  RS++V QIWSN+T N+ GYF +IVFQ
Sbjct: 206 ILNVANSLADVFVGDCSIKLNLRFPATMSIKNRSTIVGQIWSNRTVNDLGYFGRIVFQ 263


>ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera]
           gi|302143014|emb|CBI20309.3| unnamed protein product
           [Vitis vinifera]
          Length = 916

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 9/120 (7%)
 Frame = +3

Query: 6   LPEFMSFSELQCS-DEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVA 182
           LP F++    QCS DE+RL+++I+F N S+  Y    +P+  L+GEG W+   N L +VA
Sbjct: 288 LPHFINIKASQCSEDERRLKIMIKFHNFSYVDYNQLPSPNMTLIGEGWWDAKNNRLCVVA 347

Query: 183 CRFLNYTDSLANISGGDCLIRLS-----VWY---RSSVVEQIWSNKTSNESGYFDKIVFQ 338
           CR LN   SLAN   GDC IRLS     +W    RS++V QIWSNKT ++SGYF++I+FQ
Sbjct: 348 CRILNTMQSLANAHIGDCSIRLSLRFPAIWLIRSRSNIVGQIWSNKTIDDSGYFNRIMFQ 407


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