BLASTX nr result

ID: Coptis25_contig00020493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020493
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282104.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   378   e-102
emb|CBI16830.3| unnamed protein product [Vitis vinifera]              377   e-102
ref|XP_003537554.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   341   2e-91
ref|XP_002515044.1| trytophan synthase alpha subunit, putative [...   338   1e-90
emb|CAN65633.1| hypothetical protein VITISV_007118 [Vitis vinifera]   338   1e-90

>ref|XP_002282104.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate deaminase-like
            [Vitis vinifera]
          Length = 455

 Score =  378 bits (970), Expect = e-102
 Identities = 198/323 (61%), Positives = 232/323 (71%), Gaps = 4/323 (1%)
 Frame = -3

Query: 1080 VTCGGCQXXXXXXXXXXXAERGLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAK 901
            V+CGGCQ           AERGLKSHLLLRGE+P+I TGYNLIST+YGN  YVPRSLYAK
Sbjct: 143  VSCGGCQSAHAAAVAVSCAERGLKSHLLLRGERPEILTGYNLISTLYGNVKYVPRSLYAK 202

Query: 900  REEMLFKHAELVAGSNGSVICFSDILSTCFTRKKFKEENRV----HMNVDKSELAVPQAQ 733
            REEML +HA+LVAG++GSV+ F+D+L T FT +   + N V    HMN D          
Sbjct: 203  REEMLTRHADLVAGNSGSVVWFNDLLETSFTTQTSGKPNLVQIDAHMNAD---------- 252

Query: 732  NHKRKVVVVNEGAGDAAALLGVIRLVEYMSQIHLFGQEHPMKIVVDSXXXXXXXXXXXXX 553
            +H RKV ++NEGA DA  LLG+IRLV+Y+SQ HLFG+E  +KIVVD+             
Sbjct: 253  SHPRKVAIINEGAADAVGLLGMIRLVQYLSQNHLFGKERTLKIVVDAGTGTTAVGLGLGA 312

Query: 552  XXXXLQWEVIAVMLADTVEGYKKQENRLISDFKRLCGSQCVDLALNGIDDGIVHWVERIH 373
                L WEV  VMLADTV+GY+K+E  LISDFK       +D  L G+D GIVHWVER H
Sbjct: 313  LCLGLSWEVTGVMLADTVDGYRKKEKCLISDFKHCTAFHHIDHVLKGMDGGIVHWVERDH 372

Query: 372  PRKFGNVLKEEIESCQQIAQQTGVLLDPIYTLAAWEHATHLCQCEAKGNAKIVMLHTGGT 193
            PRKFGNV K E+E+CQQIAQQTG+L+DPIYTLAAWE AT L Q EAKG AK+VMLHTGGT
Sbjct: 373  PRKFGNVKKGEVEACQQIAQQTGILVDPIYTLAAWELATLLSQEEAKGGAKVVMLHTGGT 432

Query: 192  LGMFGLAQRYKSYFHTLQDPLSV 124
            LGMFGLAQRYKSYFH ++D L V
Sbjct: 433  LGMFGLAQRYKSYFHAVKDGLLV 455


>emb|CBI16830.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  377 bits (968), Expect = e-102
 Identities = 197/321 (61%), Positives = 231/321 (71%), Gaps = 4/321 (1%)
 Frame = -3

Query: 1080 VTCGGCQXXXXXXXXXXXAERGLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAK 901
            V+CGGCQ           AERGLKSHLLLRGE+P+I TGYNLIST+YGN  YVPRSLYAK
Sbjct: 143  VSCGGCQSAHAAAVAVSCAERGLKSHLLLRGERPEILTGYNLISTLYGNVKYVPRSLYAK 202

Query: 900  REEMLFKHAELVAGSNGSVICFSDILSTCFTRKKFKEENRV----HMNVDKSELAVPQAQ 733
            REEML +HA+LVAG++GSV+ F+D+L T FT +   + N V    HMN D          
Sbjct: 203  REEMLTRHADLVAGNSGSVVWFNDLLETSFTTQTSGKPNLVQIDAHMNAD---------- 252

Query: 732  NHKRKVVVVNEGAGDAAALLGVIRLVEYMSQIHLFGQEHPMKIVVDSXXXXXXXXXXXXX 553
            +H RKV ++NEGA DA  LLG+IRLV+Y+SQ HLFG+E  +KIVVD+             
Sbjct: 253  SHPRKVAIINEGAADAVGLLGMIRLVQYLSQNHLFGKERTLKIVVDAGTGTTAVGLGLGA 312

Query: 552  XXXXLQWEVIAVMLADTVEGYKKQENRLISDFKRLCGSQCVDLALNGIDDGIVHWVERIH 373
                L WEV  VMLADTV+GY+K+E  LISDFK       +D  L G+D GIVHWVER H
Sbjct: 313  LCLGLSWEVTGVMLADTVDGYRKKEKCLISDFKHCTAFHHIDHVLKGMDGGIVHWVERDH 372

Query: 372  PRKFGNVLKEEIESCQQIAQQTGVLLDPIYTLAAWEHATHLCQCEAKGNAKIVMLHTGGT 193
            PRKFGNV K E+E+CQQIAQQTG+L+DPIYTLAAWE AT L Q EAKG AK+VMLHTGGT
Sbjct: 373  PRKFGNVKKGEVEACQQIAQQTGILVDPIYTLAAWELATLLSQEEAKGGAKVVMLHTGGT 432

Query: 192  LGMFGLAQRYKSYFHTLQDPL 130
            LGMFGLAQRYKSYFH ++D L
Sbjct: 433  LGMFGLAQRYKSYFHAVKDGL 453


>ref|XP_003537554.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate deaminase-like
            [Glycine max]
          Length = 432

 Score =  341 bits (874), Expect = 2e-91
 Identities = 176/314 (56%), Positives = 223/314 (71%)
 Frame = -3

Query: 1080 VTCGGCQXXXXXXXXXXXAERGLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAK 901
            VTCGGCQ           AERG+ SHLLLRGEQP+I TGYNL+ST+YGN  YVPR++YA 
Sbjct: 120  VTCGGCQSAHTAAIAVLCAERGIVSHLLLRGEQPEILTGYNLMSTMYGNVTYVPRTVYAN 179

Query: 900  REEMLFKHAELVAGSNGSVICFSDILSTCFTRKKFKEENRVHMNVDKSELAVPQAQNHKR 721
            REEML  +AE VAG++GSV+ F DI+      + F + N + M+V +SE      +NH R
Sbjct: 180  REEMLKSYAESVAGNDGSVLWFGDIVQASSATELFTDPNFMQMDVSRSE------ENHLR 233

Query: 720  KVVVVNEGAGDAAALLGVIRLVEYMSQIHLFGQEHPMKIVVDSXXXXXXXXXXXXXXXXX 541
            K++VV+EGAGD+ ALLGVIRLV+Y+SQ HL G++  MK VVD+                 
Sbjct: 234  KILVVSEGAGDSVALLGVIRLVQYLSQNHLLGKQRLMKFVVDAGTGTTAIGLGLAARCLG 293

Query: 540  LQWEVIAVMLADTVEGYKKQENRLISDFKRLCGSQCVDLALNGIDDGIVHWVERIHPRKF 361
            L WEV AVMLAD ++GY+KQE RL+S+FK+    + +D  +N  D GIV+WVER  PRKF
Sbjct: 294  LPWEVYAVMLADKIDGYRKQEERLLSEFKKHFNIEFIDHNVNREDAGIVNWVERGRPRKF 353

Query: 360  GNVLKEEIESCQQIAQQTGVLLDPIYTLAAWEHATHLCQCEAKGNAKIVMLHTGGTLGMF 181
            GNVL+ E+E+CQQIAQQTG+L+DP+YTLAAWE A  L   EA+G  ++V+LHTGGTLGMF
Sbjct: 354  GNVLEGEVEACQQIAQQTGILVDPVYTLAAWETAMLLSSNEAEGGPEVVLLHTGGTLGMF 413

Query: 180  GLAQRYKSYFHTLQ 139
            GLAQRYK YF  L+
Sbjct: 414  GLAQRYKKYFGMLK 427


>ref|XP_002515044.1| trytophan synthase alpha subunit, putative [Ricinus communis]
            gi|223546095|gb|EEF47598.1| trytophan synthase alpha
            subunit, putative [Ricinus communis]
          Length = 442

 Score =  338 bits (868), Expect = 1e-90
 Identities = 169/315 (53%), Positives = 221/315 (70%)
 Frame = -3

Query: 1080 VTCGGCQXXXXXXXXXXXAERGLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAK 901
            VTCGGCQ           AE GLKSHLLLRGEQP++ TGYNLIS++YG   YVPR LYA 
Sbjct: 134  VTCGGCQSAHAAAVAVSCAEIGLKSHLLLRGEQPEVLTGYNLISSVYGKVTYVPRHLYAH 193

Query: 900  REEMLFKHAELVAGSNGSVICFSDILSTCFTRKKFKEENRVHMNVDKSELAVPQAQNHKR 721
            RE ML  HA+LVAG+NG V+  +DIL T FT + +   +   M+  K+       +NH +
Sbjct: 194  RESMLKIHADLVAGNNGQVLWCNDILETIFTSQTYSSLDMRTMDACKN------VENHSK 247

Query: 720  KVVVVNEGAGDAAALLGVIRLVEYMSQIHLFGQEHPMKIVVDSXXXXXXXXXXXXXXXXX 541
            +V++VNEGAGD  ALLG IRLVEY+ Q HLFG++  +K++VD+                 
Sbjct: 248  RVLIVNEGAGDVVALLGAIRLVEYLCQSHLFGKKRRVKLIVDAGTGTTAIGLGLGALCLG 307

Query: 540  LQWEVIAVMLADTVEGYKKQENRLISDFKRLCGSQCVDLALNGIDDGIVHWVERIHPRKF 361
            + WEV AV+L DT++ +K++E  L+S+F+   G   +D  LN ++ G+VHWVER   RKF
Sbjct: 308  VPWEVTAVVLVDTIDAFKQREKCLVSNFRTRFGFNLIDHCLNEVNTGVVHWVERNRKRKF 367

Query: 360  GNVLKEEIESCQQIAQQTGVLLDPIYTLAAWEHATHLCQCEAKGNAKIVMLHTGGTLGMF 181
            GNVL+ E+E+CQQIAQQTG+L+DP+YTLAAWE A H+ + E +G+A IVMLHTGGTLGMF
Sbjct: 368  GNVLEGEMEACQQIAQQTGILVDPVYTLAAWEMAAHMSKEEREGDADIVMLHTGGTLGMF 427

Query: 180  GLAQRYKSYFHTLQD 136
            GLAQRYK+YFH+L+D
Sbjct: 428  GLAQRYKTYFHSLKD 442


>emb|CAN65633.1| hypothetical protein VITISV_007118 [Vitis vinifera]
          Length = 480

 Score =  338 bits (868), Expect = 1e-90
 Identities = 181/306 (59%), Positives = 212/306 (69%), Gaps = 20/306 (6%)
 Frame = -3

Query: 1023 ERGLKSHLLLRGEQPDIPTGYNLISTIYGNTVYVPRSLYAKREEMLFKHAELVAGSNGSV 844
            ERGLKSHLLLRGE+P+I TGYNLIST+YGN  YVPRSLYAKREEML +HA+LVAG++GSV
Sbjct: 54   ERGLKSHLLLRGERPEILTGYNLISTLYGNVKYVPRSLYAKREEMLTRHADLVAGNSGSV 113

Query: 843  ICFSDILSTCFTRKKFKEENRV----HMNVDKSELAVPQAQNHKRKVVVVNEGAGDAAAL 676
            + F+D+L T FT +   + N V    HMN D          +H RKV ++NEGA DA  L
Sbjct: 114  VWFNDLLETSFTTQTSGKPNLVQIDAHMNAD----------SHPRKVAIINEGAADAVGL 163

Query: 675  LGVIRLVEYMSQIHLFGQEHPMKIVVDSXXXXXXXXXXXXXXXXXL-------------- 538
            LG+IRLV+Y+SQ HLFG+E  +KIVVD+                                
Sbjct: 164  LGMIRLVQYLSQNHLFGKERTLKIVVDAGTGTTAVGLGLGALCLGCVPVCITYKMIAFTS 223

Query: 537  --QWEVIAVMLADTVEGYKKQENRLISDFKRLCGSQCVDLALNGIDDGIVHWVERIHPRK 364
               WEV  VMLADTV+GY+K+E  LISDFK       +D  L G+D GIVHWVER HPRK
Sbjct: 224  MLSWEVTGVMLADTVDGYRKKEKCLISDFKHCTAFHHIDHVLKGMDGGIVHWVERXHPRK 283

Query: 363  FGNVLKEEIESCQQIAQQTGVLLDPIYTLAAWEHATHLCQCEAKGNAKIVMLHTGGTLGM 184
            FGNV K E+E+CQQIAQQTG+L+DPIYTLAAWE AT L Q EAKG AK+VMLHTGGTLGM
Sbjct: 284  FGNVKKGEVEACQQIAQQTGILVDPIYTLAAWELATLLSQEEAKGGAKVVMLHTGGTLGM 343

Query: 183  FGLAQR 166
            FGLAQR
Sbjct: 344  FGLAQR 349


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