BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020490
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   247   2e-63
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   222   9e-56
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   216   8e-54
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   214   3e-53
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   212   9e-53

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  247 bits (631), Expect = 2e-63
 Identities = 132/244 (54%), Positives = 171/244 (70%), Gaps = 2/244 (0%)
 Frame = +2

Query: 41  ELRNWLELPRDVXXXXXXXXXXXXXXCNAQSVCSTWRSLSKQPHLFRSIDMRSHRDFPDD 220
           E RNW ELPRDV               +AQ VCS WR L ++P ++R+IDM +  D  D 
Sbjct: 16  EERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLCDL 75

Query: 221 G-DYEKMRKSAKEAVDRSRGELVEFSMARFGNDDLLHYIVDKSSMIKCLRLVSCY-ISNE 394
           G D E+M   A+ AVDRS G+L+   +  F  D+LL+YI+D+SS I+ LRLVSCY IS++
Sbjct: 76  GYDLEEM---ARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDD 132

Query: 395 ALIEVLKKTHCLEEIELCYSTFSKEVIEEVGKNCCELKSFRLNCQGYRYPRLESDEEAFA 574
            L E +K+   L EI+LCY +FSKEV+E +G+ C  LKSFRLNCQG+R+P +E DEEA A
Sbjct: 133 GLSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALA 192

Query: 575 IAENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKCVERIKS 754
           IA+NMP L+SL LFGNKLTN GL AILD C +LE LDLR+CF ++L G+L K+C E+IK 
Sbjct: 193 IAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIKI 252

Query: 755 VRLP 766
           +R P
Sbjct: 253 LRYP 256


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  222 bits (566), Expect = 9e-56
 Identities = 118/243 (48%), Positives = 154/243 (63%), Gaps = 1/243 (0%)
 Frame = +2

Query: 41  ELRNWLELPRDVXXXXXXXXXXXXXXCNAQSVCSTWRSLSKQPHLFRSIDMRSHRDFPDD 220
           E RNWL+LPRDV                AQ VCS WR++SK+P L+R+IDMR+  D   D
Sbjct: 10  EERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDMRNLGDIGLD 69

Query: 221 GDYEKMRKSAKEAVDRSRGELVEFSMARFGNDDLLHYIVDKSSMIKCLRLVSCY-ISNEA 397
                M      A+D S G L+  ++  FG DDLLH+I   +S ++ LRL  CY IS+E 
Sbjct: 70  FHLLAM---CHRAIDYSSGHLLHINVEYFGTDDLLHHITHSTSNLRSLRLACCYQISDEG 126

Query: 398 LIEVLKKTHCLEEIELCYSTFSKEVIEEVGKNCCELKSFRLNCQGYRYPRLESDEEAFAI 577
           L E+ +K   LEE+++  S  +K+ +E +G+ C  LK+ + N +GYR P +E DEEAFAI
Sbjct: 127 LCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNMEGYRRPHIECDEEAFAI 186

Query: 578 AENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKCVERIKSV 757
           AE MP L  L LFGNKLTN GL AILD CP LE LDLR+CF ++L G L K+C E+IK +
Sbjct: 187 AETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIKEL 246

Query: 758 RLP 766
           RLP
Sbjct: 247 RLP 249


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  216 bits (549), Expect = 8e-54
 Identities = 116/245 (47%), Positives = 155/245 (63%), Gaps = 3/245 (1%)
 Frame = +2

Query: 41  ELRNWLELPRDVXXXXXXXXXXXXXXCNAQSVCSTWRSLSKQPHLFRSIDMRSHRDFPDD 220
           E RNWL+LPRDV                AQ VCS WR +SK+P L+R+IDMR+  D   +
Sbjct: 16  EERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNSGDIETN 75

Query: 221 GDYEKMRKSAKEAVDRSRGELVEFSMARFGNDDLLHYIVDKSSMIKCLRLVSCY-ISNEA 397
             +  M      A+D S G L+  ++  F  DDLL +I   +S ++ LRL  CY IS+E 
Sbjct: 76  FVFLAM---CHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISDEG 132

Query: 398 LIEVLKKTHCLEEIELCYSTFS--KEVIEEVGKNCCELKSFRLNCQGYRYPRLESDEEAF 571
           L E+ K+   LEE+++  S+F+  ++ +E VG+ C  LK+ + N +GYR P +E DEEAF
Sbjct: 133 LCEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNMKGYRRPHIECDEEAF 192

Query: 572 AIAENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKCVERIK 751
           AIAE MP L  L LFGNKLTN GL AILD CP+LE LDLR+CF ++L G L K+C E+IK
Sbjct: 193 AIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIK 252

Query: 752 SVRLP 766
            +RLP
Sbjct: 253 ELRLP 257


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  214 bits (544), Expect = 3e-53
 Identities = 122/255 (47%), Positives = 158/255 (61%), Gaps = 1/255 (0%)
 Frame = +2

Query: 5   MDTESQPAITDLELRNWLELPRDVXXXXXXXXXXXXXXCNAQSVCSTWRSLSKQPHLFRS 184
           M++   P   + E RNWLELP DV                AQ VCS+WR + + P ++R 
Sbjct: 1   MESNLSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60

Query: 185 IDMRSHRDFPDDGDYEKMRKSAKEAVDRSRGELVEFSMARFGNDDLLHYIVDKSSMIKCL 364
           IDMR   D+ D  DY  + +  ++AV RS G+L+ F++  FG DDLL YI    + +  L
Sbjct: 61  IDMRYPCDWWDM-DYN-LEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRL 118

Query: 365 RLVSCY-ISNEALIEVLKKTHCLEEIELCYSTFSKEVIEEVGKNCCELKSFRLNCQGYRY 541
           RLV C  IS+E L+E + K   LE++EL + +F  E +E +G+NC  LKS +LN Q YR 
Sbjct: 119 RLVYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYR- 177

Query: 542 PRLESDEEAFAIAENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGD 721
            R+E D+ A AIAENMP LR LH+FGN LTN GLEAILD C  LE LDLR CF L+L G 
Sbjct: 178 -RVECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQ 236

Query: 722 LEKKCVERIKSVRLP 766
           L  KC E+IK +RLP
Sbjct: 237 LGAKCSEKIKDLRLP 251


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score =  212 bits (540), Expect = 9e-53
 Identities = 115/250 (46%), Positives = 157/250 (62%), Gaps = 2/250 (0%)
 Frame = +2

Query: 23  PAITDLELRNWLELPRDVXXXXXXXXXXXXXXCNAQSVCSTWRSLSKQPHLFRSIDMRSH 202
           P + +   RNW ELPRDV               +AQ VCS+W S+ K P ++RS+++   
Sbjct: 9   PQLQEDSYRNWAELPRDVTALILDKVGAFDILGSAQFVCSSWNSVCKDPSMWRSVEIHPL 68

Query: 203 RDFPD-DGDYEKMRKSAKEAVDRSRGELVEFSMARFGNDDLLHYIVDKSSMIKCLRLVSC 379
            DF D   D E +    + AVDRSRG L+  S+  F  D L+ YI D+SS +K LRL+S 
Sbjct: 69  CDFWDLPFDLEAL---CRNAVDRSRGGLISISIEYFATDSLIKYIADRSSHLKRLRLLSS 125

Query: 380 Y-ISNEALIEVLKKTHCLEEIELCYSTFSKEVIEEVGKNCCELKSFRLNCQGYRYPRLES 556
           Y +S+ A  +  KK   LEE+++ Y + S E +  VG +C  L+S +LNCQGY+ P +ES
Sbjct: 126 YTLSDAAFSKAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKLNCQGYKRPHIES 185

Query: 557 DEEAFAIAENMPQLRSLHLFGNKLTNVGLEAILDKCPYLEYLDLRECFGLDLNGDLEKKC 736
           +EEA AI + MP LR L +FGNKLTN G++AILD CP+LE+LDLR+CF + L G+L   C
Sbjct: 186 NEEALAIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLC 245

Query: 737 VERIKSVRLP 766
            ERIK +R P
Sbjct: 246 GERIKDLRRP 255