BLASTX nr result

ID: Coptis25_contig00020487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020487
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602259.1| Soluble starch synthase [Medicago truncatula...   201   4e-50
ref|XP_003561063.1| PREDICTED: starch synthase 1, chloroplastic/...   201   5e-50
gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]          201   5e-50
gb|AFW85727.1| starch synthase I [Zea mays]                           201   7e-50
gb|ACN36715.1| unknown [Zea mays]                                     201   7e-50

>ref|XP_003602259.1| Soluble starch synthase [Medicago truncatula]
           gi|355491307|gb|AES72510.1| Soluble starch synthase
           [Medicago truncatula]
          Length = 655

 Score =  201 bits (512), Expect = 4e-50
 Identities = 93/113 (82%), Positives = 105/113 (92%)
 Frame = -1

Query: 340 YSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQF 161
           YS DDLSGKVKCK ALQKELGLPVRPDCP+IGFVGRLDYQKG DLI+ A+P+LM+DDVQF
Sbjct: 430 YSADDLSGKVKCKIALQKELGLPVRPDCPVIGFVGRLDYQKGIDLIRQAIPELMQDDVQF 489

Query: 160 VMLGSGDPQTENWMRATESAYREKFRGWVGFDVPISHKITAGCDILLMPSRFE 2
           VMLGSG+P  E+WMRATES Y++KFRGWVGF+VP+SH+ITAGCDILLMPS FE
Sbjct: 490 VMLGSGNPIYEDWMRATESLYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFE 542


>ref|XP_003561063.1| PREDICTED: starch synthase 1, chloroplastic/amyloplastic-like
           [Brachypodium distachyon]
          Length = 656

 Score =  201 bits (511), Expect = 5e-50
 Identities = 90/113 (79%), Positives = 103/113 (91%)
 Frame = -1

Query: 340 YSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQF 161
           YS+DDLSGK KCK  LQKELGLP+RPD P+IGF+GRLDYQKG DLI+ A+PDLMRDDVQF
Sbjct: 436 YSVDDLSGKAKCKAELQKELGLPIRPDIPLIGFIGRLDYQKGIDLIKLAIPDLMRDDVQF 495

Query: 160 VMLGSGDPQTENWMRATESAYREKFRGWVGFDVPISHKITAGCDILLMPSRFE 2
           VMLGSGDP  E WMR+TES+Y++KFRGWVGF +P+SH+ITAGCDILLMPSRFE
Sbjct: 496 VMLGSGDPVFEGWMRSTESSYKDKFRGWVGFSIPVSHRITAGCDILLMPSRFE 548


>gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]
          Length = 633

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/113 (81%), Positives = 104/113 (92%)
 Frame = -1

Query: 340 YSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQF 161
           YS+DDLSGKV+CK ALQKELGLP+RP CP+IGF+GRLDYQKG DLI+ A+P+LM DDVQF
Sbjct: 412 YSVDDLSGKVQCKIALQKELGLPIRPMCPLIGFIGRLDYQKGIDLIRWAIPELMEDDVQF 471

Query: 160 VMLGSGDPQTENWMRATESAYREKFRGWVGFDVPISHKITAGCDILLMPSRFE 2
           VMLGSGDP  E WMR TES+YR+KFRGWVGF+VPISH+ITAGCDILLMPSRFE
Sbjct: 472 VMLGSGDPLYEEWMRVTESSYRDKFRGWVGFNVPISHRITAGCDILLMPSRFE 524


>gb|AFW85727.1| starch synthase I [Zea mays]
          Length = 640

 Score =  201 bits (510), Expect = 7e-50
 Identities = 90/113 (79%), Positives = 104/113 (92%)
 Frame = -1

Query: 340 YSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQF 161
           YS+DDLSGK KCK ALQKELGLP+RPD P+IGF+GRLDYQKG DLIQ  +PDLMR+DVQF
Sbjct: 420 YSVDDLSGKAKCKGALQKELGLPIRPDVPLIGFIGRLDYQKGIDLIQLIIPDLMREDVQF 479

Query: 160 VMLGSGDPQTENWMRATESAYREKFRGWVGFDVPISHKITAGCDILLMPSRFE 2
           VMLGSGDP+ E+WMR+TES +++KFRGWVGF VP+SH+ITAGCDILLMPSRFE
Sbjct: 480 VMLGSGDPELEDWMRSTESIFKDKFRGWVGFSVPVSHRITAGCDILLMPSRFE 532


>gb|ACN36715.1| unknown [Zea mays]
          Length = 369

 Score =  201 bits (510), Expect = 7e-50
 Identities = 90/113 (79%), Positives = 104/113 (92%)
 Frame = -1

Query: 340 YSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQF 161
           YS+DDLSGK KCK ALQKELGLP+RPD P+IGF+GRLDYQKG DLIQ  +PDLMR+DVQF
Sbjct: 149 YSVDDLSGKAKCKGALQKELGLPIRPDVPLIGFIGRLDYQKGIDLIQLIIPDLMREDVQF 208

Query: 160 VMLGSGDPQTENWMRATESAYREKFRGWVGFDVPISHKITAGCDILLMPSRFE 2
           VMLGSGDP+ E+WMR+TES +++KFRGWVGF VP+SH+ITAGCDILLMPSRFE
Sbjct: 209 VMLGSGDPELEDWMRSTESIFKDKFRGWVGFSVPVSHRITAGCDILLMPSRFE 261


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