BLASTX nr result
ID: Coptis25_contig00020485
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020485
(698 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2... 380 e-103
emb|CBI24922.3| unnamed protein product [Vitis vinifera] 377 e-103
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 377 e-103
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2... 374 e-101
gb|AFW72944.1| DNA topoisomerase 2 [Zea mays] 370 e-100
>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
predicted protein [Populus trichocarpa]
Length = 1468
Score = 380 bits (976), Expect = e-103
Identities = 186/232 (80%), Positives = 201/232 (86%)
Frame = +1
Query: 1 FVWGDEEDGDAIEMAFSKKKIEARKNWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIA 180
F+W DE+DGDAIE+AFSKKKIEARKNWLRQ+EPGT+LD +KLIKY DF+NKELILFS+A
Sbjct: 630 FIWMDEQDGDAIELAFSKKKIEARKNWLRQYEPGTHLDQNQKLIKYSDFINKELILFSMA 689
Query: 181 DLQRSIPSMVDGLKPGQRKILFCSFKRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTII 360
DLQRSIPSMVDGLKPGQRKILFCSFKRN V KISQFSGYVSEHSAYHHGEQSLASTII
Sbjct: 690 DLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKISQFSGYVSEHSAYHHGEQSLASTII 749
Query: 361 GLAQNFVGSNNINLFNPEGQFGSRIKGGKDAASARYIFTKLSGITRFLFHKXXXXXXXXX 540
G+AQ+FVGSNNINL P GQFG+R GGKD ASARYI+T+LS ITRFLF K
Sbjct: 750 GMAQDFVGSNNINLLLPNGQFGTRSVGGKDHASARYIYTQLSPITRFLFPKDDDGLLDYL 809
Query: 541 XXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNYNPRDIVANIRRLLN 696
GQ IEP WYMPIIP+VLVNG EGIGTGWST+IPNYNPRDIVANIRRLLN
Sbjct: 810 DEDGQTIEPNWYMPIIPMVLVNGCEGIGTGWSTFIPNYNPRDIVANIRRLLN 861
>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
Length = 1452
Score = 377 bits (969), Expect = e-103
Identities = 183/232 (78%), Positives = 201/232 (86%)
Frame = +1
Query: 1 FVWGDEEDGDAIEMAFSKKKIEARKNWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIA 180
F+W DE+DGDAIE+AFSKKKIE RKNWLRQF+PGTYLD KEKLIKY DFVNKELILFS+A
Sbjct: 633 FMWVDEKDGDAIELAFSKKKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMA 692
Query: 181 DLQRSIPSMVDGLKPGQRKILFCSFKRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTII 360
DLQRSIPSMVDGLKPGQRKILFCSFKRN + KI+QFSGYVSEHSAYHHGEQSLASTII
Sbjct: 693 DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTII 752
Query: 361 GLAQNFVGSNNINLFNPEGQFGSRIKGGKDAASARYIFTKLSGITRFLFHKXXXXXXXXX 540
G+AQ+FVGSNNINL P GQFG+R +GGKD ASARYI+T+LS ITRFLF K
Sbjct: 753 GMAQDFVGSNNINLLLPNGQFGTRHQGGKDHASARYIYTRLSPITRFLFPKDDDILLDYL 812
Query: 541 XXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNYNPRDIVANIRRLLN 696
GQ IEP WY+P IP+VLVNGSEGIGTGWS+ IPNYNPRDI+AN+RRLLN
Sbjct: 813 NEDGQSIEPTWYVPTIPMVLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLN 864
>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
Length = 1489
Score = 377 bits (969), Expect = e-103
Identities = 183/232 (78%), Positives = 201/232 (86%)
Frame = +1
Query: 1 FVWGDEEDGDAIEMAFSKKKIEARKNWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIA 180
F+W DE+DGDAIE+AFSKKKIE RKNWLRQF+PGTYLD KEKLIKY DFVNKELILFS+A
Sbjct: 633 FMWVDEKDGDAIELAFSKKKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMA 692
Query: 181 DLQRSIPSMVDGLKPGQRKILFCSFKRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTII 360
DLQRSIPSMVDGLKPGQRKILFCSFKRN + KI+QFSGYVSEHSAYHHGEQSLASTII
Sbjct: 693 DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTII 752
Query: 361 GLAQNFVGSNNINLFNPEGQFGSRIKGGKDAASARYIFTKLSGITRFLFHKXXXXXXXXX 540
G+AQ+FVGSNNINL P GQFG+R +GGKD ASARYI+T+LS ITRFLF K
Sbjct: 753 GMAQDFVGSNNINLLLPNGQFGTRHQGGKDHASARYIYTRLSPITRFLFPKDDDILLDYL 812
Query: 541 XXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNYNPRDIVANIRRLLN 696
GQ IEP WY+P IP+VLVNGSEGIGTGWS+ IPNYNPRDI+AN+RRLLN
Sbjct: 813 NEDGQSIEPTWYVPTIPMVLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLN 864
>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
predicted protein [Populus trichocarpa]
Length = 1482
Score = 374 bits (959), Expect = e-101
Identities = 182/232 (78%), Positives = 197/232 (84%)
Frame = +1
Query: 1 FVWGDEEDGDAIEMAFSKKKIEARKNWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIA 180
F+W DE DGDAIE+AFSKKKIEARKNWLRQ EPGT+LD +K+IKY DF+NKELILFS+A
Sbjct: 633 FLWMDELDGDAIELAFSKKKIEARKNWLRQHEPGTHLDHNQKIIKYSDFINKELILFSMA 692
Query: 181 DLQRSIPSMVDGLKPGQRKILFCSFKRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTII 360
DLQRSIPSMVDGLKPGQRKILFCSFKRN V K+SQFSGYVSEHSAYHHGEQSLA TII
Sbjct: 693 DLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLAGTII 752
Query: 361 GLAQNFVGSNNINLFNPEGQFGSRIKGGKDAASARYIFTKLSGITRFLFHKXXXXXXXXX 540
G+AQ+FVGSNNINL P GQFG+R GGKD ASARYI+T+LS ITRFLF K
Sbjct: 753 GMAQDFVGSNNINLLQPNGQFGTRSVGGKDHASARYIYTQLSPITRFLFPKDDDGLLDYL 812
Query: 541 XXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNYNPRDIVANIRRLLN 696
GQ IEP WYMPIIP VLVNG EGIGTGWST+IPNYNPRD+VANIRRLLN
Sbjct: 813 DEDGQTIEPTWYMPIIPTVLVNGCEGIGTGWSTFIPNYNPRDVVANIRRLLN 864
>gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]
Length = 1412
Score = 370 bits (950), Expect = e-100
Identities = 176/232 (75%), Positives = 197/232 (84%)
Frame = +1
Query: 1 FVWGDEEDGDAIEMAFSKKKIEARKNWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIA 180
FVW D++DG+ IE+AFSKK+I RK WL F+PGTY+D +EK +KY DF+NKELILFS+A
Sbjct: 628 FVWVDDQDGNHIELAFSKKRIADRKQWLTNFQPGTYIDQREKQVKYSDFINKELILFSMA 687
Query: 181 DLQRSIPSMVDGLKPGQRKILFCSFKRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTII 360
DLQRSIPSMVDGLKPGQRKILFCSFKRN V K++QFSGYVSEHSAYHHGEQSLASTII
Sbjct: 688 DLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTII 747
Query: 361 GLAQNFVGSNNINLFNPEGQFGSRIKGGKDAASARYIFTKLSGITRFLFHKXXXXXXXXX 540
G+AQNFVGSNNINL +P GQFG+R +GGKDAAS RYIFTKLS ITR +F K
Sbjct: 748 GMAQNFVGSNNINLMSPNGQFGTRAQGGKDAASPRYIFTKLSNITRSIFPKDDDILLNYL 807
Query: 541 XXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNYNPRDIVANIRRLLN 696
GQ IEP WYMPI+P+VLVNGSEGIGTGWSTYIPNYNPRDIVAN+RRLLN
Sbjct: 808 NEDGQSIEPTWYMPILPMVLVNGSEGIGTGWSTYIPNYNPRDIVANVRRLLN 859