BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020480
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282223.2| PREDICTED: carbon catabolite repressor prote...   127   6e-27
ref|XP_003545500.1| PREDICTED: carbon catabolite repressor prote...   119   1e-24
ref|NP_196696.2| carbon catabolite repressor protein 4-like 6 [A...   119   2e-24
gb|AAL47464.1| At5g11350/F2I11_240 [Arabidopsis thaliana] gi|235...   119   2e-24
ref|XP_002871471.1| endonuclease/exonuclease/phosphatase family ...   117   6e-24

>ref|XP_002282223.2| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
            [Vitis vinifera] gi|296081966|emb|CBI20971.3| unnamed
            protein product [Vitis vinifera]
          Length = 786

 Score =  127 bits (318), Expect = 6e-27
 Identities = 57/64 (89%), Positives = 61/64 (95%)
 Frame = +2

Query: 818  SSIGSNQVVICNTHVLYNPRRGEIKLGQVRMLLDRAHAVSKLWNDAPVVICGDFNCTPKS 997
            SS GSN+VVICN HVLYNPRRGEIKLGQVR LLD+AHAVSK+WNDAP+VICGDFNCTPKS
Sbjct: 300  SSTGSNKVVICNIHVLYNPRRGEIKLGQVRALLDKAHAVSKIWNDAPIVICGDFNCTPKS 359

Query: 998  PLYN 1009
            PLYN
Sbjct: 360  PLYN 363


>ref|XP_003545500.1| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
            [Glycine max]
          Length = 852

 Score =  119 bits (299), Expect = 1e-24
 Identities = 55/67 (82%), Positives = 62/67 (92%), Gaps = 1/67 (1%)
 Frame = +2

Query: 812  IPSSI-GSNQVVICNTHVLYNPRRGEIKLGQVRMLLDRAHAVSKLWNDAPVVICGDFNCT 988
            +PSS+ GS++VV+CN HVLYNP RGEIKLGQVR+LLD+A AVSKLWNDAPV ICGDFNCT
Sbjct: 287  LPSSLTGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSKLWNDAPVAICGDFNCT 346

Query: 989  PKSPLYN 1009
            PKSPLYN
Sbjct: 347  PKSPLYN 353


>ref|NP_196696.2| carbon catabolite repressor protein 4-like 6 [Arabidopsis thaliana]
            gi|215275264|sp|Q8VYU4.2|CCR4F_ARATH RecName: Full=Carbon
            catabolite repressor protein 4 homolog 6; Short=CCR4
            homolog 6 gi|332004281|gb|AED91664.1| carbon catabolite
            repressor protein 4-like 6 [Arabidopsis thaliana]
          Length = 754

 Score =  119 bits (297), Expect = 2e-24
 Identities = 52/69 (75%), Positives = 62/69 (89%)
 Frame = +2

Query: 818  SSIGSNQVVICNTHVLYNPRRGEIKLGQVRMLLDRAHAVSKLWNDAPVVICGDFNCTPKS 997
            SS GS++VVICN HVL+NP+RG+ KLGQVR LLD+AHAVSKLW+DAP+V+CGDFNCTPKS
Sbjct: 320  SSAGSHRVVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKS 379

Query: 998  PLYNSYQNR 1024
            PLYN   +R
Sbjct: 380  PLYNFISDR 388


>gb|AAL47464.1| At5g11350/F2I11_240 [Arabidopsis thaliana] gi|23506113|gb|AAN28916.1|
            At5g11350/F2I11_240 [Arabidopsis thaliana]
          Length = 754

 Score =  119 bits (297), Expect = 2e-24
 Identities = 52/69 (75%), Positives = 62/69 (89%)
 Frame = +2

Query: 818  SSIGSNQVVICNTHVLYNPRRGEIKLGQVRMLLDRAHAVSKLWNDAPVVICGDFNCTPKS 997
            SS GS++VVICN HVL+NP+RG+ KLGQVR LLD+AHAVSKLW+DAP+V+CGDFNCTPKS
Sbjct: 320  SSAGSHRVVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKS 379

Query: 998  PLYNSYQNR 1024
            PLYN   +R
Sbjct: 380  PLYNFISDR 388


>ref|XP_002871471.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297317308|gb|EFH47730.1|
            endonuclease/exonuclease/phosphatase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 753

 Score =  117 bits (292), Expect = 6e-24
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = +2

Query: 818  SSIGSNQVVICNTHVLYNPRRGEIKLGQVRMLLDRAHAVSKLWNDAPVVICGDFNCTPKS 997
            SS GS+QVVICN HVL+NP+RG+ KLGQVR LLD+AHAVSKLW+DAP+V+CGDFNCTPKS
Sbjct: 319  SSAGSHQVVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKS 378

Query: 998  PLYNSYQNR 1024
             LYN   +R
Sbjct: 379  HLYNFISDR 387