BLASTX nr result

ID: Coptis25_contig00020476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020476
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314891.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002336074.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002278552.1| PREDICTED: clavaminate synthase-like protein...   108   4e-22
ref|XP_002524391.1| conserved hypothetical protein [Ricinus comm...   107   1e-21
gb|AFK36473.1| unknown [Lotus japonicus]                              105   4e-21

>ref|XP_002314891.1| predicted protein [Populus trichocarpa] gi|222863931|gb|EEF01062.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/114 (45%), Positives = 74/114 (64%)
 Frame = +2

Query: 119 EKVFAGAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDF 298
           +KV  G  +P  L   + ++S  E L+  + QNKDW    L ++ AVL RGF+V++  DF
Sbjct: 16  QKVVDGETMPLVLQPPEPNKSDTESLISALKQNKDWFEQMLIKNSAVLLRGFDVKNAEDF 75

Query: 299 RRVVEAFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSK 460
             ++EAFGWD++ Y+G APR +V  R++TANE PL  FI +HHEM L+K  P K
Sbjct: 76  NDIIEAFGWDDIRYIGPAPRTQVYKRIWTANEGPLSEFIYYHHEMVLIKESPKK 129


>ref|XP_002336074.1| predicted protein [Populus trichocarpa]
           gi|224146078|ref|XP_002336285.1| predicted protein
           [Populus trichocarpa] gi|222833741|gb|EEE72218.1|
           predicted protein [Populus trichocarpa]
           gi|222869972|gb|EEF07103.1| predicted protein [Populus
           trichocarpa]
          Length = 321

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/114 (45%), Positives = 74/114 (64%)
 Frame = +2

Query: 119 EKVFAGAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDF 298
           +KV  G  +P  L   + ++S  E L+  + QNKDW    L ++ AVL RGF+V++  DF
Sbjct: 16  QKVVDGETMPLVLQPPEPNKSDTESLISALKQNKDWFEQMLIKNSAVLLRGFDVKNAEDF 75

Query: 299 RRVVEAFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSK 460
             ++EAFGWD++ Y+G APR +V  R++TANE PL  FI +HHEM L+K  P K
Sbjct: 76  NDIIEAFGWDDIRYIGPAPRTQVYKRIWTANEGPLSEFIYYHHEMVLIKESPKK 129


>ref|XP_002278552.1| PREDICTED: clavaminate synthase-like protein At3g21360 [Vitis
           vinifera] gi|147860147|emb|CAN78723.1| hypothetical
           protein VITISV_020006 [Vitis vinifera]
           gi|297737879|emb|CBI27080.3| unnamed protein product
           [Vitis vinifera]
          Length = 322

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/115 (46%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
 Frame = +2

Query: 119 EKVFAGAVLPKTLISIDTSRSS-VEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGD 295
           +K+  G  +P  L S D + SS ++ LV  + +NKDW    + ++ AVL RG++V++  D
Sbjct: 16  QKLVHGETMPLVLHSPDPNNSSDLDSLVSSLKKNKDWFEQMIIKNSAVLLRGYDVKNAED 75

Query: 296 FRRVVEAFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSK 460
           F ++VEAFGWD++ YVG APR  V  R++TANE PL  FI +HHEM L+K  P K
Sbjct: 76  FNQIVEAFGWDDIRYVGPAPRTHVYKRIWTANEGPLEEFIYYHHEMVLIKEYPKK 130


>ref|XP_002524391.1| conserved hypothetical protein [Ricinus communis]
           gi|223536352|gb|EEF38002.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 321

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/114 (44%), Positives = 71/114 (62%)
 Frame = +2

Query: 119 EKVFAGAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDF 298
           EKV  G  +P  L   +  ++ +E LV+ +  NKDW    + ++ AVL RGF+V+   DF
Sbjct: 16  EKVVDGETMPLVLQPSEPDKNGLESLVLALKTNKDWFEQMIIKNSAVLLRGFDVKKAEDF 75

Query: 299 RRVVEAFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSK 460
             ++EAF WD++ YVG APR  +  RV+TANE PL  FI +HHEM L+K  P K
Sbjct: 76  NDIIEAFDWDDIRYVGPAPRTHIYKRVWTANEGPLSEFIYYHHEMVLIKESPLK 129


>gb|AFK36473.1| unknown [Lotus japonicus]
          Length = 321

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/118 (41%), Positives = 73/118 (61%)
 Frame = +2

Query: 107 SIPEEKVFAGAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVES 286
           ++  EKV  G  +P  L   + ++S +  L++G+   KDW    + ++ AVL RGF+V++
Sbjct: 12  NVEGEKVLDGETIPLVLKPSEPNKSDLASLLLGLKNKKDWFEQMIIKNSAVLLRGFDVKN 71

Query: 287 GGDFRRVVEAFGWDEMDYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSK 460
             DF  ++E  GW+++ YVG APR  V  RV+TANE PL  FI +HHEM L K+ P K
Sbjct: 72  AEDFNEIIETCGWEDIRYVGPAPRTHVYKRVWTANEGPLSEFIYYHHEMVLFKDNPKK 129


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