BLASTX nr result

ID: Coptis25_contig00020474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020474
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333242.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-64
ref|XP_003544773.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   245   4e-63
ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|2...   243   1e-62
gb|AFU52640.1| beta-1,3-glucanase 5 [Solanum tuberosum]               243   1e-62
gb|ADU15553.1| GLU [Gossypium hirsutum]                               242   3e-62

>ref|XP_002333242.1| predicted protein [Populus trichocarpa]
           gi|224129034|ref|XP_002320484.1| predicted protein
           [Populus trichocarpa] gi|118480997|gb|ABK92452.1|
           unknown [Populus trichocarpa]
           gi|222835778|gb|EEE74213.1| predicted protein [Populus
           trichocarpa] gi|222861257|gb|EEE98799.1| predicted
           protein [Populus trichocarpa]
          Length = 470

 Score =  249 bits (636), Expect = 2e-64
 Identities = 125/181 (69%), Positives = 146/181 (80%)
 Frame = -1

Query: 547 YDTEPTVLKALSGSNISVVVALPNELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVG 368
           YDT+P VLKALSGS I V V LPN+LL +A++  +FA  WV+ NI+AY+PSTQIE+IAVG
Sbjct: 56  YDTDPAVLKALSGSGIKVTVDLPNQLLYSAAKYPNFARSWVQKNIVAYHPSTQIESIAVG 115

Query: 367 NEVFVDPNNTTMFLVPAMKNIHSALVNSSLDSNIKISSPIALXXXXXXXXXXXXSFKPEL 188
           NEVFVDP+NTT FL+PAMKNIH ALV  +L S+IK+SSPIAL            SF+PEL
Sbjct: 116 NEVFVDPHNTTKFLIPAMKNIHQALVKFNLHSSIKVSSPIALSALQSSYPSSAGSFRPEL 175

Query: 187 IQPVITPMLDFLRSSGSYLMVNAYPYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVS 8
           I+PV  PMLDFLR +GSYLMVNAYP+FAYE N+DVISLDYALFREN G VDSGNGLKY +
Sbjct: 176 IEPVFKPMLDFLRQTGSYLMVNAYPFFAYESNSDVISLDYALFRENPGVVDSGNGLKYFN 235

Query: 7   L 5
           L
Sbjct: 236 L 236


>ref|XP_003544773.1| PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Glycine max]
          Length = 461

 Score =  245 bits (625), Expect = 4e-63
 Identities = 123/181 (67%), Positives = 143/181 (79%)
 Frame = -1

Query: 547 YDTEPTVLKALSGSNISVVVALPNELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVG 368
           YDT+ TVL A + S + VVVA+PNELL+NA+  QSF + WV+ NI +YYP+TQIE IAVG
Sbjct: 57  YDTDATVLTAFANSGMKVVVAMPNELLANAAAEQSFTDAWVQANISSYYPATQIEAIAVG 116

Query: 367 NEVFVDPNNTTMFLVPAMKNIHSALVNSSLDSNIKISSPIALXXXXXXXXXXXXSFKPEL 188
           NEVFVDPNNTT FLVPAMKN+H++LV  SLD NIKISSPIAL            SFK EL
Sbjct: 117 NEVFVDPNNTTKFLVPAMKNVHASLVKYSLDKNIKISSPIALSALQNSFPASSGSFKTEL 176

Query: 187 IQPVITPMLDFLRSSGSYLMVNAYPYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVS 8
           ++PVI PMLDFLR +GSYLMVNAYP+FAY  N+D ISLDYALF+EN G VDSGNGLKY +
Sbjct: 177 LEPVIKPMLDFLRQTGSYLMVNAYPFFAYAANSDKISLDYALFKENPGVVDSGNGLKYTN 236

Query: 7   L 5
           L
Sbjct: 237 L 237


>ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|222844587|gb|EEE82134.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  243 bits (621), Expect = 1e-62
 Identities = 122/181 (67%), Positives = 143/181 (79%)
 Frame = -1

Query: 547 YDTEPTVLKALSGSNISVVVALPNELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVG 368
           YDT+P VLKALSG  I V V LPNELL +A+++  FA  WV+ N++AY+PSTQIE IAVG
Sbjct: 56  YDTDPIVLKALSGCGIKVTVDLPNELLYSAAKNPYFARTWVQKNVVAYHPSTQIEAIAVG 115

Query: 367 NEVFVDPNNTTMFLVPAMKNIHSALVNSSLDSNIKISSPIALXXXXXXXXXXXXSFKPEL 188
           NEVFVDP+NTT FL+PAM+NIH ALV  +L S+IKISSP+AL            SF+PEL
Sbjct: 116 NEVFVDPHNTTKFLIPAMRNIHQALVKFNLHSSIKISSPVALSALQSSYPSSAGSFRPEL 175

Query: 187 IQPVITPMLDFLRSSGSYLMVNAYPYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVS 8
           I+PV  PMLDFLR +GSYLMVNAYP+FAYE N+DVISLDYAL REN G VDSGNGL+Y S
Sbjct: 176 IEPVFKPMLDFLRQTGSYLMVNAYPFFAYESNSDVISLDYALLRENPGVVDSGNGLRYFS 235

Query: 7   L 5
           L
Sbjct: 236 L 236


>gb|AFU52640.1| beta-1,3-glucanase 5 [Solanum tuberosum]
          Length = 477

 Score =  243 bits (620), Expect = 1e-62
 Identities = 122/181 (67%), Positives = 141/181 (77%)
 Frame = -1

Query: 547 YDTEPTVLKALSGSNISVVVALPNELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVG 368
           YDT+P VLKALSGS+I V V LPNELL NA++  SFA  WV+ N+ AYYPSTQIE+IAVG
Sbjct: 59  YDTDPAVLKALSGSDIKVTVNLPNELLYNAAKRPSFAYSWVEKNVAAYYPSTQIESIAVG 118

Query: 367 NEVFVDPNNTTMFLVPAMKNIHSALVNSSLDSNIKISSPIALXXXXXXXXXXXXSFKPEL 188
           NEVFVDP+NTT FLV AMKN+H ALV  +    IKISSP+AL            SF+ EL
Sbjct: 119 NEVFVDPHNTTRFLVSAMKNVHQALVKYNFHDKIKISSPVALSALQNSYPSSAGSFRSEL 178

Query: 187 IQPVITPMLDFLRSSGSYLMVNAYPYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVS 8
           ++PVI PMLDFLR +GSYLMVN YP+FAYE N+DVISLDYALFREN G VD+GNGL+Y S
Sbjct: 179 VEPVIKPMLDFLRQTGSYLMVNCYPFFAYESNSDVISLDYALFRENPGVVDAGNGLRYFS 238

Query: 7   L 5
           L
Sbjct: 239 L 239


>gb|ADU15553.1| GLU [Gossypium hirsutum]
          Length = 469

 Score =  242 bits (617), Expect = 3e-62
 Identities = 123/182 (67%), Positives = 144/182 (79%)
 Frame = -1

Query: 547 YDTEPTVLKALSGSNISVVVALPNELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVG 368
           YDT+ TVL AL+ S I+VVVALPNELLS+ +  QSFA++WV+ NI  +YP T+IE IAVG
Sbjct: 59  YDTDATVLTALADSGITVVVALPNELLSSTAADQSFADNWVEANITKFYPKTKIEAIAVG 118

Query: 367 NEVFVDPNNTTMFLVPAMKNIHSALVNSSLDSNIKISSPIALXXXXXXXXXXXXSFKPEL 188
           NEVFVDP NTT +LVPAMKNIH++LV S LDS IKISSPIA             SFKPEL
Sbjct: 119 NEVFVDPANTTKYLVPAMKNIHASLVKSKLDSAIKISSPIAFSALKTSYPSSAGSFKPEL 178

Query: 187 IQPVITPMLDFLRSSGSYLMVNAYPYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVS 8
           I+PVI PMLDFL+ +GSYLMVNAYP+FAY  N+D ISLDYALF++N G VDSGNGLKY S
Sbjct: 179 IEPVIKPMLDFLKQTGSYLMVNAYPFFAYSANSDQISLDYALFKDNPGVVDSGNGLKYSS 238

Query: 7   LM 2
           L+
Sbjct: 239 LL 240


Top