BLASTX nr result

ID: Coptis25_contig00020470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020470
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614410.1| hypothetical protein MTR_5g053280 [Medicago ...   131   5e-29
ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090...   130   9e-29
ref|XP_002524395.1| conserved hypothetical protein [Ricinus comm...   130   9e-29
emb|CBI27076.3| unnamed protein product [Vitis vinifera]              130   9e-29
gb|AFK38663.1| unknown [Medicago truncatula]                          130   1e-28

>ref|XP_003614410.1| hypothetical protein MTR_5g053280 [Medicago truncatula]
           gi|355515745|gb|AES97368.1| hypothetical protein
           MTR_5g053280 [Medicago truncatula]
          Length = 440

 Score =  131 bits (330), Expect = 5e-29
 Identities = 70/112 (62%), Positives = 86/112 (76%), Gaps = 4/112 (3%)
 Frame = -2

Query: 328 AFMPYLSTNSPIDFDAVVF----REDLQHLLSTAASSGKVQSSVEFNHTKKSVTLFMPGF 161
           AF+     NSPID++ V+     ++  Q L S ++ S  + SSV+F+  +KSVTLFMPGF
Sbjct: 329 AFISSPLVNSPIDWNKVLLDTVNKDARQFLTSLSSQSSNMTSSVKFDVIRKSVTLFMPGF 388

Query: 160 DKSEIKLYQYRGGSELLVEAGDQRRVIRLPSSIQGKVGGAKFTDKSLLITMR 5
           DKSEIKLYQYRGGSELLVEAGDQRRVI LP  IQGKVGGAKF D+SL+IT++
Sbjct: 389 DKSEIKLYQYRGGSELLVEAGDQRRVIPLPQEIQGKVGGAKFQDRSLVITLK 440


>ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Vitis vinifera]
          Length = 441

 Score =  130 bits (328), Expect = 9e-29
 Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 4/112 (3%)
 Frame = -2

Query: 328 AFMPYLSTNSPIDFDAVVFR---EDLQHLLST-AASSGKVQSSVEFNHTKKSVTLFMPGF 161
           A  P++   S  D++A++     ED ++LLS  A+SS  V   V+F+ +KKSV+L MPGF
Sbjct: 330 ALCPHVPMGSLPDWNAIISSNPSEDARNLLSAPASSSSNVMEPVKFDPSKKSVSLLMPGF 389

Query: 160 DKSEIKLYQYRGGSELLVEAGDQRRVIRLPSSIQGKVGGAKFTDKSLLITMR 5
           DKSEIKLYQYRGGSELLVEAGDQRRVIRLP  IQGKVGGAKF D+ L+ITMR
Sbjct: 390 DKSEIKLYQYRGGSELLVEAGDQRRVIRLPPEIQGKVGGAKFADRKLVITMR 441


>ref|XP_002524395.1| conserved hypothetical protein [Ricinus communis]
           gi|223536356|gb|EEF38006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score =  130 bits (328), Expect = 9e-29
 Identities = 68/112 (60%), Positives = 87/112 (77%), Gaps = 4/112 (3%)
 Frame = -2

Query: 328 AFMPYLSTNSPIDFDAVVFR---EDLQHLLSTAAS-SGKVQSSVEFNHTKKSVTLFMPGF 161
           AF+P+ ST  P+D+++++      D + L S+ AS S  +   V+F+ +KKS+TLFMPGF
Sbjct: 306 AFIPHFSTGYPLDWNSIMLNTAGHDARDLFSSPASQSDSIMLPVKFDASKKSITLFMPGF 365

Query: 160 DKSEIKLYQYRGGSELLVEAGDQRRVIRLPSSIQGKVGGAKFTDKSLLITMR 5
           DK+EIKLYQYRGGSELLVEAGDQRRVI LP  IQGKVG AKF D+SL+ITM+
Sbjct: 366 DKTEIKLYQYRGGSELLVEAGDQRRVICLPPKIQGKVGSAKFMDRSLVITMQ 417


>emb|CBI27076.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  130 bits (328), Expect = 9e-29
 Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 4/112 (3%)
 Frame = -2

Query: 328 AFMPYLSTNSPIDFDAVVFR---EDLQHLLST-AASSGKVQSSVEFNHTKKSVTLFMPGF 161
           A  P++   S  D++A++     ED ++LLS  A+SS  V   V+F+ +KKSV+L MPGF
Sbjct: 330 ALCPHVPMGSLPDWNAIISSNPSEDARNLLSAPASSSSNVMEPVKFDPSKKSVSLLMPGF 389

Query: 160 DKSEIKLYQYRGGSELLVEAGDQRRVIRLPSSIQGKVGGAKFTDKSLLITMR 5
           DKSEIKLYQYRGGSELLVEAGDQRRVIRLP  IQGKVGGAKF D+ L+ITMR
Sbjct: 390 DKSEIKLYQYRGGSELLVEAGDQRRVIRLPPEIQGKVGGAKFADRKLVITMR 441


>gb|AFK38663.1| unknown [Medicago truncatula]
          Length = 440

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/112 (62%), Positives = 85/112 (75%), Gaps = 4/112 (3%)
 Frame = -2

Query: 328 AFMPYLSTNSPIDFDAVVF----REDLQHLLSTAASSGKVQSSVEFNHTKKSVTLFMPGF 161
           AF+     NSPID++ V+     ++  Q L S +  S  + SSV+F+  +KSVTLFMPGF
Sbjct: 329 AFISSPLVNSPIDWNKVLLDTVNKDARQFLTSLSNQSSNMTSSVKFDVIRKSVTLFMPGF 388

Query: 160 DKSEIKLYQYRGGSELLVEAGDQRRVIRLPSSIQGKVGGAKFTDKSLLITMR 5
           DKSEIKLYQYRGGSELLVEAGDQRRVI LP  IQGKVGGAKF D+SL+IT++
Sbjct: 389 DKSEIKLYQYRGGSELLVEAGDQRRVIPLPQEIQGKVGGAKFQDRSLVITLK 440


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