BLASTX nr result
ID: Coptis25_contig00020464
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020464
(1577 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera] 590 e-166
ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266... 589 e-166
emb|CBI35955.3| unnamed protein product [Vitis vinifera] 589 e-166
ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat... 560 e-157
ref|XP_002527400.1| pentatricopeptide repeat-containing protein,... 558 e-156
>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 590 bits (1522), Expect = e-166
Identities = 297/463 (64%), Positives = 365/463 (78%), Gaps = 1/463 (0%)
Frame = +1
Query: 4 KAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSLI 183
+ M+ F M +GIGATAEA+AV LSV D+ A +GK IHGYV+ GF +Y+FV NSLI
Sbjct: 254 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 313
Query: 184 SMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKS-AHSMMT 360
+YGKH +N A+ LF +IK K++VSWNAL+SS+A+ CDEAF +F +LEK+ + M+
Sbjct: 314 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 373
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLGREI 540
PNVVSWS VIG FA+KG+ +E LELFR+MQ V+ N+VTIASVLSVCAELAAL+LGREI
Sbjct: 374 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433
Query: 541 HGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITGFGLHGLG 720
HGHVV MD NILVGNGLI+MYTK G+ K G VF++I KDLISWN+M+ G+G+HGLG
Sbjct: 434 HGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLG 493
Query: 721 EDALTCFHEMIRARMKPDGITFVGVLSSCSHAGLVIEGKRLFDQMTSEYLITPQIEHYAC 900
E+A+ F +MI+ +PDG+TFV VLS+CSHAGLV EG+ LFD+M E+ + PQ+EHYAC
Sbjct: 494 ENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYAC 553
Query: 901 MVDLLGRAGLLQEASEIVKMMPFEPDPYVSGALLNSCRMYKNTEVAEQTASHIFNLESNS 1080
MVDLLGRAGLLQEAS++VK MP EP+ V GALLNSCRM+KNTEVAE+TAS IFNL S
Sbjct: 554 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEI 613
Query: 1081 TGSYMLLSNIYAANKRWEDSAKVRMLAKTKGLKKNPGWSWIEVKKKVYTFSAGSTLQQGL 1260
GSYMLLSNIYAA+ RWEDSAKVR+ AKTKGLKK PG SWI+VKKKVY FSAG+T L
Sbjct: 614 AGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAEL 673
Query: 1261 EQVHEILRDLCLRMEIEGYIPDKSFVLQDVGEEEKKQILYGHS 1389
E+V+ IL+DL L+ME+EGYIPD +EE++ IL G+S
Sbjct: 674 EEVYRILKDLGLQMEVEGYIPDI--------DEEQRSILLGYS 708
Score = 160 bits (404), Expect = 1e-36
Identities = 98/335 (29%), Positives = 165/335 (49%), Gaps = 44/335 (13%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
E+A++ + M + G+ A + + CA +G+ + +HG+V+ GF + V N L
Sbjct: 117 EEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNEL 176
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSAHSMMT 360
+ MYGK +++A+ +F + ++S VSWN ++S +A C A E+F + + +
Sbjct: 177 MGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAG---LE 233
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLGREI 540
PN+V+W++++ + A G+ E +ELF +M+ + A +A VLSV +LAA + G+ I
Sbjct: 234 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 293
Query: 541 HGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMIT-------- 696
HG+VV G + + V N LI +Y K GN+ R +F I K+++SWN++I+
Sbjct: 294 HGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 697 -------------------------------GFGLHGLGEDALTCFHEMIRARMKPDGIT 783
GF G GE+AL F M A++K + +T
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 413
Query: 784 FVGVLSSCS-----HAGLVIEGKRLFDQMTSEYLI 873
VLS C+ H G I G + M L+
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILV 448
Score = 104 bits (259), Expect = 7e-20
Identities = 66/247 (26%), Positives = 117/247 (47%)
Frame = +1
Query: 115 KEIHGYVISAGFHDYIFVNNSLISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEA 294
++IH +I G H F+ ++S+Y +++A+ +F +
Sbjct: 51 QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPI---------------- 94
Query: 295 DLCDEAFELFSRLEKSAHSMMTPNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNA 474
E FS N++ W++++ A G +E LE++ +M+ + V +
Sbjct: 95 -------ECFS------------NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADG 135
Query: 475 VTIASVLSVCAELAALNLGREIHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDR 654
T V+ CA + + L R +HGHVV N+ VGN L+ MY K G + R VF+R
Sbjct: 136 FTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFER 195
Query: 655 INGKDLISWNSMITGFGLHGLGEDALTCFHEMIRARMKPDGITFVGVLSSCSHAGLVIEG 834
+ + +SWN+M++G+ L+ A F M A ++P+ +T+ +LSS + G +E
Sbjct: 196 MAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVET 255
Query: 835 KRLFDQM 855
LF +M
Sbjct: 256 MELFGRM 262
Score = 86.3 bits (212), Expect = 2e-14
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
E+A++ F M + A + +A LSVCA++ A+ G+EIHG+V+ + I V N L
Sbjct: 393 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 452
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSAHSMMT 360
I+MY K E +F I+ K L+SWN +++ + L + A F ++ K
Sbjct: 453 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDG---FE 509
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKM-QCVNVEPNAVTIASVLSVCAELAALNLGRE 537
P+ V++ V+ A ++ G E ELF KM + VEP A ++ + L L +E
Sbjct: 510 PDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL---LGRAGLLQE 566
Query: 538 IHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITG 699
V + ++ N V L++ N ++ +I + NS I G
Sbjct: 567 ASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQI-----FNLNSEIAG 615
>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 589 bits (1518), Expect = e-166
Identities = 296/462 (64%), Positives = 364/462 (78%), Gaps = 1/462 (0%)
Frame = +1
Query: 4 KAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSLI 183
+ M+ F M +GIGATAEA+AV LSV D+ A +GK IHGYV+ GF +Y+FV NSLI
Sbjct: 1092 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 1151
Query: 184 SMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKS-AHSMMT 360
+YGKH +N A+ LF +IK K++VSWNAL+SS+A+ CDEAF +F +LEK+ + M+
Sbjct: 1152 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 1211
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLGREI 540
PNVVSWS VIG FA+KG+ +E LELFR+MQ V+ N+VTIASVLSVCAELAAL+LGREI
Sbjct: 1212 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 1271
Query: 541 HGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITGFGLHGLG 720
HGHVV MD NILVGNGLI+MYTK G+ K G VF++I KDLISWN+M+ G+G+HGLG
Sbjct: 1272 HGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLG 1331
Query: 721 EDALTCFHEMIRARMKPDGITFVGVLSSCSHAGLVIEGKRLFDQMTSEYLITPQIEHYAC 900
E+A+ F +MI+ +PDG+TFV VLS+CSHAGLV EG+ LFD+M E+ + PQ+EHYAC
Sbjct: 1332 ENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYAC 1391
Query: 901 MVDLLGRAGLLQEASEIVKMMPFEPDPYVSGALLNSCRMYKNTEVAEQTASHIFNLESNS 1080
MVDLLGRAGLLQEAS++VK MP EP+ V GALLNSCRM+KNTEVAE+TAS IFNL S
Sbjct: 1392 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEI 1451
Query: 1081 TGSYMLLSNIYAANKRWEDSAKVRMLAKTKGLKKNPGWSWIEVKKKVYTFSAGSTLQQGL 1260
GSYMLLSNIYAA+ RWEDSAKVR+ AKTKGLKK PG SWI+VKKKVY FSAG+T L
Sbjct: 1452 AGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAEL 1511
Query: 1261 EQVHEILRDLCLRMEIEGYIPDKSFVLQDVGEEEKKQILYGH 1386
E+V+ IL+DL L+ME+EGYIPD +EE++ IL G+
Sbjct: 1512 EEVYRILKDLGLQMEVEGYIPDI--------DEEQRSILLGY 1545
Score = 160 bits (404), Expect = 1e-36
Identities = 98/335 (29%), Positives = 165/335 (49%), Gaps = 44/335 (13%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
E+A++ + M + G+ A + + CA +G+ + +HG+V+ GF + V N L
Sbjct: 955 EEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNEL 1014
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSAHSMMT 360
+ MYGK +++A+ +F + ++S VSWN ++S +A C A E+F + + +
Sbjct: 1015 MGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAG---LE 1071
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLGREI 540
PN+V+W++++ + A G+ E +ELF +M+ + A +A VLSV +LAA + G+ I
Sbjct: 1072 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 1131
Query: 541 HGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMIT-------- 696
HG+VV G + + V N LI +Y K GN+ R +F I K+++SWN++I+
Sbjct: 1132 HGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 1191
Query: 697 -------------------------------GFGLHGLGEDALTCFHEMIRARMKPDGIT 783
GF G GE+AL F M A++K + +T
Sbjct: 1192 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 1251
Query: 784 FVGVLSSCS-----HAGLVIEGKRLFDQMTSEYLI 873
VLS C+ H G I G + M L+
Sbjct: 1252 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILV 1286
Score = 104 bits (259), Expect = 7e-20
Identities = 66/247 (26%), Positives = 117/247 (47%)
Frame = +1
Query: 115 KEIHGYVISAGFHDYIFVNNSLISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEA 294
++IH +I G H F+ ++S+Y +++A+ +F +
Sbjct: 889 QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPI---------------- 932
Query: 295 DLCDEAFELFSRLEKSAHSMMTPNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNA 474
E FS N++ W++++ A G +E LE++ +M+ + V +
Sbjct: 933 -------ECFS------------NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADG 973
Query: 475 VTIASVLSVCAELAALNLGREIHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDR 654
T V+ CA + + L R +HGHVV N+ VGN L+ MY K G + R VF+R
Sbjct: 974 FTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFER 1033
Query: 655 INGKDLISWNSMITGFGLHGLGEDALTCFHEMIRARMKPDGITFVGVLSSCSHAGLVIEG 834
+ + +SWN+M++G+ L+ A F M A ++P+ +T+ +LSS + G +E
Sbjct: 1034 MAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVET 1093
Query: 835 KRLFDQM 855
LF +M
Sbjct: 1094 MELFGRM 1100
Score = 86.3 bits (212), Expect = 2e-14
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
E+A++ F M + A + +A LSVCA++ A+ G+EIHG+V+ + I V N L
Sbjct: 1231 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 1290
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSAHSMMT 360
I+MY K E +F I+ K L+SWN +++ + L + A F ++ K
Sbjct: 1291 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDG---FE 1347
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKM-QCVNVEPNAVTIASVLSVCAELAALNLGRE 537
P+ V++ V+ A ++ G E ELF KM + VEP A ++ + L L +E
Sbjct: 1348 PDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL---LGRAGLLQE 1404
Query: 538 IHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITG 699
V + ++ N V L++ N ++ +I + NS I G
Sbjct: 1405 ASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQI-----FNLNSEIAG 1453
>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 589 bits (1518), Expect = e-166
Identities = 296/462 (64%), Positives = 364/462 (78%), Gaps = 1/462 (0%)
Frame = +1
Query: 4 KAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSLI 183
+ M+ F M +GIGATAEA+AV LSV D+ A +GK IHGYV+ GF +Y+FV NSLI
Sbjct: 254 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 313
Query: 184 SMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKS-AHSMMT 360
+YGKH +N A+ LF +IK K++VSWNAL+SS+A+ CDEAF +F +LEK+ + M+
Sbjct: 314 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 373
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLGREI 540
PNVVSWS VIG FA+KG+ +E LELFR+MQ V+ N+VTIASVLSVCAELAAL+LGREI
Sbjct: 374 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433
Query: 541 HGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITGFGLHGLG 720
HGHVV MD NILVGNGLI+MYTK G+ K G VF++I KDLISWN+M+ G+G+HGLG
Sbjct: 434 HGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLG 493
Query: 721 EDALTCFHEMIRARMKPDGITFVGVLSSCSHAGLVIEGKRLFDQMTSEYLITPQIEHYAC 900
E+A+ F +MI+ +PDG+TFV VLS+CSHAGLV EG+ LFD+M E+ + PQ+EHYAC
Sbjct: 494 ENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYAC 553
Query: 901 MVDLLGRAGLLQEASEIVKMMPFEPDPYVSGALLNSCRMYKNTEVAEQTASHIFNLESNS 1080
MVDLLGRAGLLQEAS++VK MP EP+ V GALLNSCRM+KNTEVAE+TAS IFNL S
Sbjct: 554 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEI 613
Query: 1081 TGSYMLLSNIYAANKRWEDSAKVRMLAKTKGLKKNPGWSWIEVKKKVYTFSAGSTLQQGL 1260
GSYMLLSNIYAA+ RWEDSAKVR+ AKTKGLKK PG SWI+VKKKVY FSAG+T L
Sbjct: 614 AGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAEL 673
Query: 1261 EQVHEILRDLCLRMEIEGYIPDKSFVLQDVGEEEKKQILYGH 1386
E+V+ IL+DL L+ME+EGYIPD +EE++ IL G+
Sbjct: 674 EEVYRILKDLGLQMEVEGYIPDI--------DEEQRSILLGY 707
Score = 160 bits (404), Expect = 1e-36
Identities = 98/335 (29%), Positives = 165/335 (49%), Gaps = 44/335 (13%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
E+A++ + M + G+ A + + CA +G+ + +HG+V+ GF + V N L
Sbjct: 117 EEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNEL 176
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSAHSMMT 360
+ MYGK +++A+ +F + ++S VSWN ++S +A C A E+F + + +
Sbjct: 177 MGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAG---LE 233
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLGREI 540
PN+V+W++++ + A G+ E +ELF +M+ + A +A VLSV +LAA + G+ I
Sbjct: 234 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 293
Query: 541 HGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMIT-------- 696
HG+VV G + + V N LI +Y K GN+ R +F I K+++SWN++I+
Sbjct: 294 HGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 697 -------------------------------GFGLHGLGEDALTCFHEMIRARMKPDGIT 783
GF G GE+AL F M A++K + +T
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 413
Query: 784 FVGVLSSCS-----HAGLVIEGKRLFDQMTSEYLI 873
VLS C+ H G I G + M L+
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILV 448
Score = 104 bits (259), Expect = 7e-20
Identities = 66/247 (26%), Positives = 117/247 (47%)
Frame = +1
Query: 115 KEIHGYVISAGFHDYIFVNNSLISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEA 294
++IH +I G H F+ ++S+Y +++A+ +F +
Sbjct: 51 QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPI---------------- 94
Query: 295 DLCDEAFELFSRLEKSAHSMMTPNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNA 474
E FS N++ W++++ A G +E LE++ +M+ + V +
Sbjct: 95 -------ECFS------------NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADG 135
Query: 475 VTIASVLSVCAELAALNLGREIHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDR 654
T V+ CA + + L R +HGHVV N+ VGN L+ MY K G + R VF+R
Sbjct: 136 FTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFER 195
Query: 655 INGKDLISWNSMITGFGLHGLGEDALTCFHEMIRARMKPDGITFVGVLSSCSHAGLVIEG 834
+ + +SWN+M++G+ L+ A F M A ++P+ +T+ +LSS + G +E
Sbjct: 196 MAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVET 255
Query: 835 KRLFDQM 855
LF +M
Sbjct: 256 MELFGRM 262
Score = 86.3 bits (212), Expect = 2e-14
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
E+A++ F M + A + +A LSVCA++ A+ G+EIHG+V+ + I V N L
Sbjct: 393 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 452
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSAHSMMT 360
I+MY K E +F I+ K L+SWN +++ + L + A F ++ K
Sbjct: 453 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDG---FE 509
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKM-QCVNVEPNAVTIASVLSVCAELAALNLGRE 537
P+ V++ V+ A ++ G E ELF KM + VEP A ++ + L L +E
Sbjct: 510 PDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL---LGRAGLLQE 566
Query: 538 IHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITG 699
V + ++ N V L++ N ++ +I + NS I G
Sbjct: 567 ASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQI-----FNLNSEIAG 615
>ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 560 bits (1442), Expect = e-157
Identities = 276/442 (62%), Positives = 343/442 (77%), Gaps = 3/442 (0%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
++ ++ F M +GI AEA+AV LSVCAD+ V GKEIHGYV+ G+ DY+FV N+L
Sbjct: 250 DETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNAL 309
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSA---HS 351
I YGKH+ + +A +F +IK K+LVSWNAL+SS+AE+ LCDEA+ F +EKS HS
Sbjct: 310 IGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHS 369
Query: 352 MMTPNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLG 531
++ PNV+SWS VI FA KGR ++ LELFR+MQ V N VTI+SVLSVCAELAALNLG
Sbjct: 370 LVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLG 429
Query: 532 REIHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITGFGLH 711
RE+HG+ + M NILVGNGLI+MY KCG+ K G VFD I G+DLISWNS+I G+G+H
Sbjct: 430 RELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMH 489
Query: 712 GLGEDALTCFHEMIRARMKPDGITFVGVLSSCSHAGLVIEGKRLFDQMTSEYLITPQIEH 891
GLGE+AL F+EMIRARMKPD ITFV +LS+CSHAGLV G+ LFDQM +E+ I P +EH
Sbjct: 490 GLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEH 549
Query: 892 YACMVDLLGRAGLLQEASEIVKMMPFEPDPYVSGALLNSCRMYKNTEVAEQTASHIFNLE 1071
YACMVDLLGRAGLL+EA++IV+ MP EP+ YV GALLNSCRMYK+ ++ E+TAS I L+
Sbjct: 550 YACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLK 609
Query: 1072 SNSTGSYMLLSNIYAANKRWEDSAKVRMLAKTKGLKKNPGWSWIEVKKKVYTFSAGSTLQ 1251
S TGS+MLLSNIYAAN RW+DSA+VR+ A+TKGLKK PG SWIEV+KKVYTFSAG+ +
Sbjct: 610 SKITGSFMLLSNIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVH 669
Query: 1252 QGLEQVHEILRDLCLRMEIEGY 1317
GLE ++ IL +L L M E Y
Sbjct: 670 FGLEDIYVILEELNLHMASENY 691
Score = 159 bits (403), Expect = 1e-36
Identities = 91/291 (31%), Positives = 162/291 (55%), Gaps = 6/291 (2%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
+ A++ +VEM + G + + + C+ +G+ + +H + + GF +++ V N L
Sbjct: 114 QHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNEL 173
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSAHSMMT 360
+ MYGK + +A+ LF + ++S+VSWN ++S +A A +F R+E +
Sbjct: 174 VGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEG---LQ 230
Query: 361 PNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLGREI 540
PN V+W++++ + A G DE LELF+ M+ +E A +A VLSVCA++A ++ G+EI
Sbjct: 231 PNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEI 290
Query: 541 HGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITGFGLHGLG 720
HG+VV G + + V N LI Y K ++ VF I K+L+SWN++I+ + GL
Sbjct: 291 HGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLC 350
Query: 721 EDALTCFHEMIR------ARMKPDGITFVGVLSSCSHAGLVIEGKRLFDQM 855
++A F M + + ++P+ I++ V+S ++ G + LF QM
Sbjct: 351 DEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQM 401
Score = 94.7 bits (234), Expect = 6e-17
Identities = 60/251 (23%), Positives = 116/251 (46%)
Frame = +1
Query: 103 VSKGKEIHGYVISAGFHDYIFVNNSLISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSS 282
+ + +++H ++ H F+ LI++Y + F++ A+ +F I L+SL
Sbjct: 44 LQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESL--------- 94
Query: 283 FAEADLCDEAFELFSRLEKSAHSMMTPNVVSWSTVIGAFANKGRTDECLELFRKMQCVNV 462
+++ W+++I A + G LEL+ +M+ +
Sbjct: 95 --------------------------HHLLLWNSIIRANVSHGYHQHALELYVEMRKLGF 128
Query: 463 EPNAVTIASVLSVCAELAALNLGREIHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRS 642
P+ T+ V+ C+ L + L R +H H + ++ V N L+ MY K G ++ R
Sbjct: 129 LPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQ 188
Query: 643 VFDRINGKDLISWNSMITGFGLHGLGEDALTCFHEMIRARMKPDGITFVGVLSSCSHAGL 822
+FD + + ++SWN+M++G+ L+ A F M ++P+ +T+ +LSS + GL
Sbjct: 189 LFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGL 248
Query: 823 VIEGKRLFDQM 855
E LF M
Sbjct: 249 YDETLELFKVM 259
>ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533210|gb|EEF34966.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 621
Score = 558 bits (1438), Expect = e-156
Identities = 282/457 (61%), Positives = 350/457 (76%), Gaps = 2/457 (0%)
Frame = +1
Query: 1 EKAMQFFVEMSRKGIGATAEAVAVGLSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSL 180
E+AM+ F M KG+ + EA+AV +S+CAD+GA + K IH Y + GF +Y FV ++L
Sbjct: 160 EEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSAL 219
Query: 181 ISMYGKHKFINEAKSLFSDIKLKSLVSWNALMSSFAEADLCDEAFELFSRLEKSAHS-MM 357
I +YGKH +N A +LF ++K KSL SWNAL++S AEA LCDEA E+FS+LE+S +
Sbjct: 220 ICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRL 279
Query: 358 TPNVVSWSTVIGAFANKGRTDECLELFRKMQCVNVEPNAVTIASVLSVCAELAALNLGRE 537
PNVVSWS +I FA+KGR E LELFR+MQ + NAVTI++VLS+CAELAAL+LGRE
Sbjct: 280 RPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGRE 339
Query: 538 IHGHVVTGSMDKNILVGNGLIHMYTKCGNLKIGRSVFDRINGKDLISWNSMITGFGLHGL 717
IHGHVV M NILVGNGL++MY KCG LK G +F++ KDLISWNSMITG+G+HGL
Sbjct: 340 IHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGL 399
Query: 718 GEDALTCFHEMIRARMKPDGITFVGVLSSCSHAGLVIEGKRLFDQMTSEYLITPQIEHYA 897
G +AL F +MI+ KPDG+TFV VLSSCSH+GLV EG+RLFDQM +Y I PQ+EHYA
Sbjct: 400 GMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYA 459
Query: 898 CMVDLLGRAGLLQEASEIVKMMPFEPDPYVSGALLNSCRMYKNTEVAEQTASHIFNL-ES 1074
CMVDLLGRAGLL+EASEIVK MP P+ V GALLNSCRM+ NTE+AE+TASH+FNL
Sbjct: 460 CMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHR 519
Query: 1075 NSTGSYMLLSNIYAANKRWEDSAKVRMLAKTKGLKKNPGWSWIEVKKKVYTFSAGSTLQQ 1254
+TG+YMLLSNIYAA+ RWEDSA+VR AKTKGLKKNPG SWI+V+K VYTFSAG+ +Q+
Sbjct: 520 ETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEKNVYTFSAGNNMQR 579
Query: 1255 GLEQVHEILRDLCLRMEIEGYIPDKSFVLQDVGEEEK 1365
G EQ+ EIL +L +ME EG + D Q V +E +
Sbjct: 580 GFEQIFEILEELTFQMEREGTVHDTDITPQAVYQETR 616
Score = 159 bits (403), Expect = 1e-36
Identities = 86/264 (32%), Positives = 150/264 (56%), Gaps = 4/264 (1%)
Frame = +1
Query: 76 LSVCADVGAVSKGKEIHGYVISAGFHDYIFVNNSLISMYGKHKFINEAKSLFSDIKLKSL 255
+ CA +G+ GK IHG+V+ GF ++ V N LI MY K + +A+ LF + ++S
Sbjct: 49 IRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRSY 108
Query: 256 VSWNALMSSFAEADLCDEAFELFSRLEKSAHSMMTPNVVSWSTVIGAFANKGRTDECLEL 435
+SWN ++S++A C+ A E+F R+E M PN+V+W+++I ++A G +E +EL
Sbjct: 109 ISWNTMVSAYAFNYDCNGALEIFQRMESEG---MEPNLVTWTSLISSYARSGWHEEAMEL 165
Query: 436 FRKMQCVNVEPNAVTIASVLSVCAELAALNLGREIHGHVVTGSMDKNILVGNGLIHMYTK 615
F M+ VE + +A V+S+CA+L A + IH + V G ++ V + LI +Y K
Sbjct: 166 FGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGK 225
Query: 616 CGNLKIGRSVFDRINGKDLISWNSMITGFGLHGLGEDALTCFHEMIRA----RMKPDGIT 783
G++ ++F + K L SWN++IT GL ++AL F ++ R+ R++P+ ++
Sbjct: 226 HGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVS 285
Query: 784 FVGVLSSCSHAGLVIEGKRLFDQM 855
+ ++ + G E LF +M
Sbjct: 286 WSAIIDGFASKGREKEALELFRRM 309
Score = 85.9 bits (211), Expect = 3e-14
Identities = 45/139 (32%), Positives = 75/139 (53%)
Frame = +1
Query: 439 RKMQCVNVEPNAVTIASVLSVCAELAALNLGREIHGHVVTGSMDKNILVGNGLIHMYTKC 618
R+M+ + + T V+ CA + + LG+ IHGHV+ ++ VGN LI MY K
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 619 GNLKIGRSVFDRINGKDLISWNSMITGFGLHGLGEDALTCFHEMIRARMKPDGITFVGVL 798
G ++ R +FDR++ + ISWN+M++ + + AL F M M+P+ +T+ ++
Sbjct: 91 GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150
Query: 799 SSCSHAGLVIEGKRLFDQM 855
SS + +G E LF M
Sbjct: 151 SSYARSGWHEEAMELFGLM 169