BLASTX nr result
ID: Coptis25_contig00020452
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020452
(1369 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu... 577 e-162
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2... 565 e-158
emb|CBI15390.3| unnamed protein product [Vitis vinifera] 554 e-155
ref|XP_002271556.1| PREDICTED: G patch domain-containing protein... 554 e-155
ref|XP_004138338.1| PREDICTED: G patch domain-containing protein... 546 e-153
>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
gi|223549179|gb|EEF50668.1| RNA binding protein, putative
[Ricinus communis]
Length = 1000
Score = 577 bits (1488), Expect = e-162
Identities = 289/456 (63%), Positives = 347/456 (76%), Gaps = 2/456 (0%)
Frame = +3
Query: 3 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
G LR +VPW+QEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQ+FTSSRK RAE K
Sbjct: 34 GHLRTLVPWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQSFTSSRKNRAEVK 93
Query: 183 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
+Q+ILNFLDDDE+AE++ RSL TS+ FDTFGFTAA+ A+KQAEKEQ +RPSAIPGPVPDE
Sbjct: 94 QQNILNFLDDDERAELEDRSLGTSSQFDTFGFTAAEYARKQAEKEQQQRPSAIPGPVPDE 153
Query: 363 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
+V PA SIG+KLLLKMGWRHGHSI+ R N YDARREARKA LA SSDDA + E
Sbjct: 154 LVLPATESIGVKLLLKMGWRHGHSIRGSRANSLYDARREARKALLALSSDDANVHCIKSE 213
Query: 543 P--DDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLCVS 716
P DD+ S G S +D S+STPVFVLNPKQD++GLG+DP+KHAPEFRE+KR VS
Sbjct: 214 PGEDDLGSLG---LSVNDDVQTSRSTPVFVLNPKQDLYGLGYDPYKHAPEFREKKRSRVS 270
Query: 717 GNQELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQDIE 896
N+E G+R ++D LF KSGK APGFGIG +Y + Y+FEET V+++E
Sbjct: 271 DNREPGNRKALLMRDGLFGFKSGKAAPGFGIGALEEYDAEDEDLYGTAYDFEETCVEEVE 330
Query: 897 EPSTINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGK 1076
EP+ I+ D K E+G LPGF+VAS+SD+QLERF+PPVIP DF P HKF +L+
Sbjct: 331 EPARISTDHKQKLVWKEQGVLPGFRVASNSDYQLERFDPPVIPKDFVPHHKFPGSLQADD 390
Query: 1077 KLAGPPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHD 1256
K PPPPEV PP D + KLLI+G A LV RCGKLFE+LSR+KN++NPLFSFL+GG+GH+
Sbjct: 391 KHTIPPPPEVPPPDDNNLKLLIEGVATLVARCGKLFEDLSRDKNQSNPLFSFLNGGNGHE 450
Query: 1257 YYARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
YYAR+LWEE +D +S S+Q+ + S
Sbjct: 451 YYARKLWEECQKCNDQKHLALDGKSSSSVQRMTAES 486
>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
predicted protein [Populus trichocarpa]
Length = 965
Score = 565 bits (1456), Expect = e-158
Identities = 286/458 (62%), Positives = 342/458 (74%), Gaps = 4/458 (0%)
Frame = +3
Query: 3 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
G LR + W+QEVRDEEGRRRFHGAFTGG+SAGYYNT GSKEGWTPQ+FTSSRK RAE K
Sbjct: 34 GHLRTLPSWKQEVRDEEGRRRFHGAFTGGFSAGYYNTAGSKEGWTPQSFTSSRKNRAEFK 93
Query: 183 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
+QS+LNFLD+DEK E++GRSL T++ FDTFGFTAA++A+KQAEKEQ +RPSA+PGP PDE
Sbjct: 94 QQSMLNFLDEDEKEELEGRSLGTASQFDTFGFTAAEIARKQAEKEQQQRPSAVPGPAPDE 153
Query: 363 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
IV PA SIG+KLLLKMGWRHGHSIKD N Y ARREARKAFLAFSSDDAK E
Sbjct: 154 IVLPATESIGVKLLLKMGWRHGHSIKDSHANSLYKARREARKAFLAFSSDDAKSQPEDSE 213
Query: 543 P--DDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLCVS 716
P +D S D+ Q DD +S+STPV++LNPK+D HGLG+DP+KHAPEFRE+KR VS
Sbjct: 214 PGEEDHKSILDH-QPIDDGFPSSQSTPVYILNPKEDTHGLGYDPYKHAPEFREKKRTRVS 272
Query: 717 GNQELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQDIE 896
G + G++ +KD LF KSG+ APGFGIG VYA+ Y+ E+TY+Q+ E
Sbjct: 273 GKRGSGNKQALSIKDSLFGLKSGRAAPGFGIGALEDYDAEDEDVYATAYDIEDTYIQEDE 332
Query: 897 EPSTINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGK 1076
EP N + K E+G LPGFKVAS+SD+QLERF+PPVIP DF P HKF LE K
Sbjct: 333 EPLRSNTENKPKLVWKEQGVLPGFKVASNSDYQLERFDPPVIPKDFLPHHKFPGPLEFDK 392
Query: 1077 KLA--GPPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDG 1250
K A PPPPEV PP D + K+LI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+G
Sbjct: 393 KPATLSPPPPEVPPPEDDNSKVLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNG 452
Query: 1251 HDYYARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
HDYY+R+LWEE +D + S+ K +V S
Sbjct: 453 HDYYSRKLWEEQQKRNGQKKIALDGKLSSSVDKMTVES 490
>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 554 bits (1428), Expect = e-155
Identities = 284/455 (62%), Positives = 339/455 (74%), Gaps = 1/455 (0%)
Frame = +3
Query: 3 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
G LR++ PW+QEV DEEGRRRFHGAFTGG+SAG+YNTVGSKEGW PQ+FTSSRK RAE K
Sbjct: 34 GLLRSLPPWKQEVTDEEGRRRFHGAFTGGFSAGFYNTVGSKEGWAPQSFTSSRKNRAEVK 93
Query: 183 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
+QSI +FLDDDE AEM+G SL TS FDTFGFTAA++A+KQAEKEQ +RPSAIPGP+PDE
Sbjct: 94 KQSIFSFLDDDEIAEMEGHSLGTSLQFDTFGFTAAELARKQAEKEQQQRPSAIPGPLPDE 153
Query: 363 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
IV A SIG+KLLLKMGWR G+SIKD TN YDARREARKAFLA SSDD LA E
Sbjct: 154 IVLLATESIGVKLLLKMGWRRGNSIKDSHTNSLYDARREARKAFLALSSDDVSTDLAVSE 213
Query: 543 PDDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLCVSGN 722
+ E +D +S+STPV+VLNPKQD+HGLG+DPFKHAPEFRE+KRL +SG
Sbjct: 214 GVKSDLQNAIELPANDDLKSSESTPVYVLNPKQDLHGLGYDPFKHAPEFREKKRLRMSGK 273
Query: 723 QELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQDIEEP 902
+ELG LK+DLFA KS K+APGFGIG VYASGY+FE+ Y+Q++EEP
Sbjct: 274 KELG------LKNDLFAFKSRKVAPGFGIGALEELDVEDEDVYASGYDFEDNYIQEVEEP 327
Query: 903 STINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGKKL 1082
S + + K E+G L GFKVAS D+QLERF+PPV+P +F P HKF A L+ K
Sbjct: 328 SGLVIESKQKLGSKEKGVLSGFKVASKLDYQLERFDPPVVPKNFVPHHKFHAPLDDSNKH 387
Query: 1083 AG-PPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDY 1259
G PPPPE P D + KLLI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+G DY
Sbjct: 388 DGDPPPPEAIAPEDNNLKLLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNGCDY 447
Query: 1260 YARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
YAR+LWEE +D++S P++QK + S
Sbjct: 448 YARKLWEERQKHNDKSKQLLDVKSSPTVQKMTAES 482
>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera]
Length = 997
Score = 554 bits (1428), Expect = e-155
Identities = 284/455 (62%), Positives = 339/455 (74%), Gaps = 1/455 (0%)
Frame = +3
Query: 3 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
G LR++ PW+QEV DEEGRRRFHGAFTGG+SAG+YNTVGSKEGW PQ+FTSSRK RAE K
Sbjct: 34 GLLRSLPPWKQEVTDEEGRRRFHGAFTGGFSAGFYNTVGSKEGWAPQSFTSSRKNRAEVK 93
Query: 183 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
+QSI +FLDDDE AEM+G SL TS FDTFGFTAA++A+KQAEKEQ +RPSAIPGP+PDE
Sbjct: 94 KQSIFSFLDDDEIAEMEGHSLGTSLQFDTFGFTAAELARKQAEKEQQQRPSAIPGPLPDE 153
Query: 363 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
IV A SIG+KLLLKMGWR G+SIKD TN YDARREARKAFLA SSDD LA E
Sbjct: 154 IVLLATESIGVKLLLKMGWRRGNSIKDSHTNSLYDARREARKAFLALSSDDVSTDLAVSE 213
Query: 543 PDDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLCVSGN 722
+ E +D +S+STPV+VLNPKQD+HGLG+DPFKHAPEFRE+KRL +SG
Sbjct: 214 GVKSDLQNAIELPANDDLKSSESTPVYVLNPKQDLHGLGYDPFKHAPEFREKKRLRMSGK 273
Query: 723 QELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQDIEEP 902
+ELG LK+DLFA KS K+APGFGIG VYASGY+FE+ Y+Q++EEP
Sbjct: 274 KELG------LKNDLFAFKSRKVAPGFGIGALEELDVEDEDVYASGYDFEDNYIQEVEEP 327
Query: 903 STINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGKKL 1082
S + + K E+G L GFKVAS D+QLERF+PPV+P +F P HKF A L+ K
Sbjct: 328 SGLVIESKQKLGSKEKGVLSGFKVASKLDYQLERFDPPVVPKNFVPHHKFHAPLDDSNKH 387
Query: 1083 AG-PPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDY 1259
G PPPPE P D + KLLI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+G DY
Sbjct: 388 DGDPPPPEAIAPEDNNLKLLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNGCDY 447
Query: 1260 YARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
YAR+LWEE +D++S P++QK + S
Sbjct: 448 YARKLWEERQKHNDKSKQLLDVKSSPTVQKMTAES 482
>ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis sativus]
Length = 1001
Score = 546 bits (1407), Expect = e-153
Identities = 279/460 (60%), Positives = 339/460 (73%), Gaps = 6/460 (1%)
Frame = +3
Query: 3 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
G +R + W+QEVRDEEGRRRFHGAFTGG+SAG+YNTVGSKEGWTPQ+FTSSRK RAE K
Sbjct: 34 GTMRTLPHWKQEVRDEEGRRRFHGAFTGGFSAGHYNTVGSKEGWTPQSFTSSRKNRAEVK 93
Query: 183 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
+Q+ILNFLD+DEKAE++GR L TSA FDTFGFTA ++A+KQA+KEQ +RPSAIPGPVPDE
Sbjct: 94 QQNILNFLDEDEKAELEGRGLGTSAQFDTFGFTAVELARKQADKEQQQRPSAIPGPVPDE 153
Query: 363 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
++ PAA SIG+KLLLKMGWRHG +IKD R N YDARR+ARKAFLAFS+ D K + E
Sbjct: 154 LIVPAAESIGVKLLLKMGWRHGRAIKDSRANSRYDARRDARKAFLAFSTGDVKSEIPNSE 213
Query: 543 P----DDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLC 710
P DDI S Q S+S+STPV+V+NPKQD+HGLGFDP+KHAPEF E+KR
Sbjct: 214 PFQEDDDIVS----PQLAKGDVSSSQSTPVYVINPKQDLHGLGFDPYKHAPEFMEKKRAR 269
Query: 711 VSGNQELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQD 890
+GNQE G + VF K++LF ++ +IA GFGIG VY SGY FEETYVQ+
Sbjct: 270 TAGNQE-GYKKVFSTKNNLFGFRTERIASGFGIGALEELDVEDEDVYTSGYEFEETYVQE 328
Query: 891 IEEPST--INRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAAL 1064
+EP + I + + + EG L GF++AS SD+Q+ERF+PPVIP DF P HKF+ L
Sbjct: 329 EDEPPSKMITDGKQKLIGRKVEGVLLGFRIASKSDYQMERFDPPVIPKDFIPHHKFAGPL 388
Query: 1065 EIGKKLAGPPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGG 1244
G KLA PP EV PP D + KLLI+G A LV RCGKLFE+LSREKNK+NPLFSFL+GG
Sbjct: 389 IGGYKLADTPPVEVPPPEDNNLKLLIEGVATLVARCGKLFEDLSREKNKSNPLFSFLNGG 448
Query: 1245 DGHDYYARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
G +YY+R+LWEE D + PSL+K + S
Sbjct: 449 TGQEYYSRKLWEEQLKRVDQPKPQFDDKLSPSLKKMTAES 488