BLASTX nr result

ID: Coptis25_contig00020452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020452
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu...   577   e-162
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2...   565   e-158
emb|CBI15390.3| unnamed protein product [Vitis vinifera]              554   e-155
ref|XP_002271556.1| PREDICTED: G patch domain-containing protein...   554   e-155
ref|XP_004138338.1| PREDICTED: G patch domain-containing protein...   546   e-153

>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
            gi|223549179|gb|EEF50668.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1000

 Score =  577 bits (1488), Expect = e-162
 Identities = 289/456 (63%), Positives = 347/456 (76%), Gaps = 2/456 (0%)
 Frame = +3

Query: 3    GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
            G LR +VPW+QEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQ+FTSSRK RAE K
Sbjct: 34   GHLRTLVPWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQSFTSSRKNRAEVK 93

Query: 183  EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
            +Q+ILNFLDDDE+AE++ RSL TS+ FDTFGFTAA+ A+KQAEKEQ +RPSAIPGPVPDE
Sbjct: 94   QQNILNFLDDDERAELEDRSLGTSSQFDTFGFTAAEYARKQAEKEQQQRPSAIPGPVPDE 153

Query: 363  IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
            +V PA  SIG+KLLLKMGWRHGHSI+  R N  YDARREARKA LA SSDDA     + E
Sbjct: 154  LVLPATESIGVKLLLKMGWRHGHSIRGSRANSLYDARREARKALLALSSDDANVHCIKSE 213

Query: 543  P--DDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLCVS 716
            P  DD+ S G    S +D    S+STPVFVLNPKQD++GLG+DP+KHAPEFRE+KR  VS
Sbjct: 214  PGEDDLGSLG---LSVNDDVQTSRSTPVFVLNPKQDLYGLGYDPYKHAPEFREKKRSRVS 270

Query: 717  GNQELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQDIE 896
             N+E G+R    ++D LF  KSGK APGFGIG           +Y + Y+FEET V+++E
Sbjct: 271  DNREPGNRKALLMRDGLFGFKSGKAAPGFGIGALEEYDAEDEDLYGTAYDFEETCVEEVE 330

Query: 897  EPSTINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGK 1076
            EP+ I+ D K      E+G LPGF+VAS+SD+QLERF+PPVIP DF P HKF  +L+   
Sbjct: 331  EPARISTDHKQKLVWKEQGVLPGFRVASNSDYQLERFDPPVIPKDFVPHHKFPGSLQADD 390

Query: 1077 KLAGPPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHD 1256
            K   PPPPEV PP D + KLLI+G A LV RCGKLFE+LSR+KN++NPLFSFL+GG+GH+
Sbjct: 391  KHTIPPPPEVPPPDDNNLKLLIEGVATLVARCGKLFEDLSRDKNQSNPLFSFLNGGNGHE 450

Query: 1257 YYARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
            YYAR+LWEE           +D +S  S+Q+ +  S
Sbjct: 451  YYARKLWEECQKCNDQKHLALDGKSSSSVQRMTAES 486


>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  565 bits (1456), Expect = e-158
 Identities = 286/458 (62%), Positives = 342/458 (74%), Gaps = 4/458 (0%)
 Frame = +3

Query: 3    GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
            G LR +  W+QEVRDEEGRRRFHGAFTGG+SAGYYNT GSKEGWTPQ+FTSSRK RAE K
Sbjct: 34   GHLRTLPSWKQEVRDEEGRRRFHGAFTGGFSAGYYNTAGSKEGWTPQSFTSSRKNRAEFK 93

Query: 183  EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
            +QS+LNFLD+DEK E++GRSL T++ FDTFGFTAA++A+KQAEKEQ +RPSA+PGP PDE
Sbjct: 94   QQSMLNFLDEDEKEELEGRSLGTASQFDTFGFTAAEIARKQAEKEQQQRPSAVPGPAPDE 153

Query: 363  IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
            IV PA  SIG+KLLLKMGWRHGHSIKD   N  Y ARREARKAFLAFSSDDAK      E
Sbjct: 154  IVLPATESIGVKLLLKMGWRHGHSIKDSHANSLYKARREARKAFLAFSSDDAKSQPEDSE 213

Query: 543  P--DDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLCVS 716
            P  +D  S  D+ Q  DD   +S+STPV++LNPK+D HGLG+DP+KHAPEFRE+KR  VS
Sbjct: 214  PGEEDHKSILDH-QPIDDGFPSSQSTPVYILNPKEDTHGLGYDPYKHAPEFREKKRTRVS 272

Query: 717  GNQELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQDIE 896
            G +  G++    +KD LF  KSG+ APGFGIG           VYA+ Y+ E+TY+Q+ E
Sbjct: 273  GKRGSGNKQALSIKDSLFGLKSGRAAPGFGIGALEDYDAEDEDVYATAYDIEDTYIQEDE 332

Query: 897  EPSTINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGK 1076
            EP   N + K      E+G LPGFKVAS+SD+QLERF+PPVIP DF P HKF   LE  K
Sbjct: 333  EPLRSNTENKPKLVWKEQGVLPGFKVASNSDYQLERFDPPVIPKDFLPHHKFPGPLEFDK 392

Query: 1077 KLA--GPPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDG 1250
            K A   PPPPEV PP D + K+LI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+G
Sbjct: 393  KPATLSPPPPEVPPPEDDNSKVLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNG 452

Query: 1251 HDYYARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
            HDYY+R+LWEE           +D +   S+ K +V S
Sbjct: 453  HDYYSRKLWEEQQKRNGQKKIALDGKLSSSVDKMTVES 490


>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  554 bits (1428), Expect = e-155
 Identities = 284/455 (62%), Positives = 339/455 (74%), Gaps = 1/455 (0%)
 Frame = +3

Query: 3    GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
            G LR++ PW+QEV DEEGRRRFHGAFTGG+SAG+YNTVGSKEGW PQ+FTSSRK RAE K
Sbjct: 34   GLLRSLPPWKQEVTDEEGRRRFHGAFTGGFSAGFYNTVGSKEGWAPQSFTSSRKNRAEVK 93

Query: 183  EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
            +QSI +FLDDDE AEM+G SL TS  FDTFGFTAA++A+KQAEKEQ +RPSAIPGP+PDE
Sbjct: 94   KQSIFSFLDDDEIAEMEGHSLGTSLQFDTFGFTAAELARKQAEKEQQQRPSAIPGPLPDE 153

Query: 363  IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
            IV  A  SIG+KLLLKMGWR G+SIKD  TN  YDARREARKAFLA SSDD    LA  E
Sbjct: 154  IVLLATESIGVKLLLKMGWRRGNSIKDSHTNSLYDARREARKAFLALSSDDVSTDLAVSE 213

Query: 543  PDDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLCVSGN 722
                  +   E   +D   +S+STPV+VLNPKQD+HGLG+DPFKHAPEFRE+KRL +SG 
Sbjct: 214  GVKSDLQNAIELPANDDLKSSESTPVYVLNPKQDLHGLGYDPFKHAPEFREKKRLRMSGK 273

Query: 723  QELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQDIEEP 902
            +ELG      LK+DLFA KS K+APGFGIG           VYASGY+FE+ Y+Q++EEP
Sbjct: 274  KELG------LKNDLFAFKSRKVAPGFGIGALEELDVEDEDVYASGYDFEDNYIQEVEEP 327

Query: 903  STINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGKKL 1082
            S +  + K      E+G L GFKVAS  D+QLERF+PPV+P +F P HKF A L+   K 
Sbjct: 328  SGLVIESKQKLGSKEKGVLSGFKVASKLDYQLERFDPPVVPKNFVPHHKFHAPLDDSNKH 387

Query: 1083 AG-PPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDY 1259
             G PPPPE   P D + KLLI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+G DY
Sbjct: 388  DGDPPPPEAIAPEDNNLKLLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNGCDY 447

Query: 1260 YARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
            YAR+LWEE           +D++S P++QK +  S
Sbjct: 448  YARKLWEERQKHNDKSKQLLDVKSSPTVQKMTAES 482


>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera]
          Length = 997

 Score =  554 bits (1428), Expect = e-155
 Identities = 284/455 (62%), Positives = 339/455 (74%), Gaps = 1/455 (0%)
 Frame = +3

Query: 3    GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
            G LR++ PW+QEV DEEGRRRFHGAFTGG+SAG+YNTVGSKEGW PQ+FTSSRK RAE K
Sbjct: 34   GLLRSLPPWKQEVTDEEGRRRFHGAFTGGFSAGFYNTVGSKEGWAPQSFTSSRKNRAEVK 93

Query: 183  EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
            +QSI +FLDDDE AEM+G SL TS  FDTFGFTAA++A+KQAEKEQ +RPSAIPGP+PDE
Sbjct: 94   KQSIFSFLDDDEIAEMEGHSLGTSLQFDTFGFTAAELARKQAEKEQQQRPSAIPGPLPDE 153

Query: 363  IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
            IV  A  SIG+KLLLKMGWR G+SIKD  TN  YDARREARKAFLA SSDD    LA  E
Sbjct: 154  IVLLATESIGVKLLLKMGWRRGNSIKDSHTNSLYDARREARKAFLALSSDDVSTDLAVSE 213

Query: 543  PDDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLCVSGN 722
                  +   E   +D   +S+STPV+VLNPKQD+HGLG+DPFKHAPEFRE+KRL +SG 
Sbjct: 214  GVKSDLQNAIELPANDDLKSSESTPVYVLNPKQDLHGLGYDPFKHAPEFREKKRLRMSGK 273

Query: 723  QELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQDIEEP 902
            +ELG      LK+DLFA KS K+APGFGIG           VYASGY+FE+ Y+Q++EEP
Sbjct: 274  KELG------LKNDLFAFKSRKVAPGFGIGALEELDVEDEDVYASGYDFEDNYIQEVEEP 327

Query: 903  STINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEIGKKL 1082
            S +  + K      E+G L GFKVAS  D+QLERF+PPV+P +F P HKF A L+   K 
Sbjct: 328  SGLVIESKQKLGSKEKGVLSGFKVASKLDYQLERFDPPVVPKNFVPHHKFHAPLDDSNKH 387

Query: 1083 AG-PPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDY 1259
             G PPPPE   P D + KLLI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+G DY
Sbjct: 388  DGDPPPPEAIAPEDNNLKLLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNGCDY 447

Query: 1260 YARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
            YAR+LWEE           +D++S P++QK +  S
Sbjct: 448  YARKLWEERQKHNDKSKQLLDVKSSPTVQKMTAES 482


>ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis sativus]
          Length = 1001

 Score =  546 bits (1407), Expect = e-153
 Identities = 279/460 (60%), Positives = 339/460 (73%), Gaps = 6/460 (1%)
 Frame = +3

Query: 3    GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 182
            G +R +  W+QEVRDEEGRRRFHGAFTGG+SAG+YNTVGSKEGWTPQ+FTSSRK RAE K
Sbjct: 34   GTMRTLPHWKQEVRDEEGRRRFHGAFTGGFSAGHYNTVGSKEGWTPQSFTSSRKNRAEVK 93

Query: 183  EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 362
            +Q+ILNFLD+DEKAE++GR L TSA FDTFGFTA ++A+KQA+KEQ +RPSAIPGPVPDE
Sbjct: 94   QQNILNFLDEDEKAELEGRGLGTSAQFDTFGFTAVELARKQADKEQQQRPSAIPGPVPDE 153

Query: 363  IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 542
            ++ PAA SIG+KLLLKMGWRHG +IKD R N  YDARR+ARKAFLAFS+ D K  +   E
Sbjct: 154  LIVPAAESIGVKLLLKMGWRHGRAIKDSRANSRYDARRDARKAFLAFSTGDVKSEIPNSE 213

Query: 543  P----DDIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLC 710
            P    DDI S     Q      S+S+STPV+V+NPKQD+HGLGFDP+KHAPEF E+KR  
Sbjct: 214  PFQEDDDIVS----PQLAKGDVSSSQSTPVYVINPKQDLHGLGFDPYKHAPEFMEKKRAR 269

Query: 711  VSGNQELGSRGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXXVYASGYNFEETYVQD 890
             +GNQE G + VF  K++LF  ++ +IA GFGIG           VY SGY FEETYVQ+
Sbjct: 270  TAGNQE-GYKKVFSTKNNLFGFRTERIASGFGIGALEELDVEDEDVYTSGYEFEETYVQE 328

Query: 891  IEEPST--INRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAAL 1064
             +EP +  I    + +  +  EG L GF++AS SD+Q+ERF+PPVIP DF P HKF+  L
Sbjct: 329  EDEPPSKMITDGKQKLIGRKVEGVLLGFRIASKSDYQMERFDPPVIPKDFIPHHKFAGPL 388

Query: 1065 EIGKKLAGPPPPEVSPPRDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGG 1244
              G KLA  PP EV PP D + KLLI+G A LV RCGKLFE+LSREKNK+NPLFSFL+GG
Sbjct: 389  IGGYKLADTPPVEVPPPEDNNLKLLIEGVATLVARCGKLFEDLSREKNKSNPLFSFLNGG 448

Query: 1245 DGHDYYARRLWEEXXXXXXXXXXXVDMESVPSLQKESVPS 1364
             G +YY+R+LWEE            D +  PSL+K +  S
Sbjct: 449  TGQEYYSRKLWEEQLKRVDQPKPQFDDKLSPSLKKMTAES 488


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