BLASTX nr result

ID: Coptis25_contig00020445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020445
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   415   e-114
ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|2...   408   e-112
ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265...   406   e-111
emb|CBI41050.3| unnamed protein product [Vitis vinifera]              406   e-111
ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108

>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
            gi|223541698|gb|EEF43246.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1255

 Score =  415 bits (1066), Expect = e-114
 Identities = 209/311 (67%), Positives = 235/311 (75%), Gaps = 6/311 (1%)
 Frame = +3

Query: 3    GTFPGIPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYPDSNMQKPQPVAPG 182
            GTFPG PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR  G A R  D+NMQKPQ  APG
Sbjct: 903  GTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFIGVAQRSTDTNMQKPQSGAPG 962

Query: 183  KAEEPNTASTRAGPGLVKSEEVQASRAEL----GAKVAEGPKNRAQRLGSGNAGHGYTYE 350
            K EE N+ S++    +V+S+EVQ +R       G  V EGP  R+ RLG GNAG GYT+E
Sbjct: 963  KVEEANSVSSKPAQAMVRSDEVQTARGGQLVPGGKGVEEGPAGRS-RLGYGNAGQGYTFE 1021

Query: 351  EVKVLFLILMELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVFQEVVEASLLPYIQ 530
            EVKVLFLILM+LC RT  LAHP P SQVG +NIQ+ LHYI+GNYTV  EVVEASL P++Q
Sbjct: 1022 EVKVLFLILMDLCRRTAALAHPLPVSQVGSSNIQVRLHYINGNYTVLPEVVEASLGPHMQ 1081

Query: 531  NMPRPRGADAAGMLLRELELHPPAEEWHKHNMFGGPWSDTE-CDLLDDTLRPSS-SXXXX 704
            NMPRPRGADAAG+LLRELELHPP+EEWH+ NMFGGPWSD E     DDT R SS +    
Sbjct: 1082 NMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDITSADDTPRMSSYTDSLD 1141

Query: 705  XXXXXXXXXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYLGIMGSRRDVLTATWKTGL 884
                          GLWPRKRR+SER+AAFGL TSVGLGAYLGIMGSRRDV+TA WKTGL
Sbjct: 1142 FSSLENCDVYYGVNGLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGL 1201

Query: 885  EGVWYKCIRCL 917
            EGVWYKCIRCL
Sbjct: 1202 EGVWYKCIRCL 1212


>ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|222848774|gb|EEE86321.1|
            predicted protein [Populus trichocarpa]
          Length = 1328

 Score =  408 bits (1049), Expect = e-112
 Identities = 207/310 (66%), Positives = 230/310 (74%), Gaps = 5/310 (1%)
 Frame = +3

Query: 3    GTFPGIPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYP-DSNMQKPQPVAP 179
            GTFPG PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR  GG  R P D+N QKPQ  A 
Sbjct: 977  GTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFAGGTQRNPTDTNAQKPQSGAA 1036

Query: 180  GKAEEPNTASTRAGPGLVKSEEVQASRAEL---GAK-VAEGPKNRAQRLGSGNAGHGYTY 347
            GK EE NT S++  P  V+S+E QA R      GAK V EGP  R  R+GSGNAG GY+ 
Sbjct: 1037 GKVEEINTVSSKPAPAAVRSDEGQAVRGSQVVPGAKAVEEGPAGR-HRVGSGNAGQGYSS 1095

Query: 348  EEVKVLFLILMELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVFQEVVEASLLPYI 527
            EEV VLFLILM+LC RT  L HP P SQVG +NIQ+ LHYIDGNYTV  EVVEASL P++
Sbjct: 1096 EEVTVLFLILMDLCRRTASLGHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHM 1155

Query: 528  QNMPRPRGADAAGMLLRELELHPPAEEWHKHNMFGGPWSDTECDLLDDTLRPSSSXXXXX 707
            QNMPRPRGADAAG+LLRELELHPP+EEWH+ NMFGGPWSD E    DDT + +S+     
Sbjct: 1156 QNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDMGSDDTSKLNSTNSLDF 1215

Query: 708  XXXXXXXXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYLGIMGSRRDVLTATWKTGLE 887
                         GLWPRKRRLSER+AA GL TS GLGAYLGIMGSRRDV+TA WKTGLE
Sbjct: 1216 SSLENCDVYYGAHGLWPRKRRLSERDAAVGLNTSAGLGAYLGIMGSRRDVVTAVWKTGLE 1275

Query: 888  GVWYKCIRCL 917
            GVWYKCIRCL
Sbjct: 1276 GVWYKCIRCL 1285


>ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265327, partial [Vitis
            vinifera]
          Length = 785

 Score =  406 bits (1044), Expect = e-111
 Identities = 208/311 (66%), Positives = 233/311 (74%), Gaps = 6/311 (1%)
 Frame = +3

Query: 3    GTFPGIPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYPDSNMQKPQPVAPG 182
            GTFPG PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR  G A R  D+NM KPQ     
Sbjct: 434  GTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRVIGVAQRNADTNMHKPQATGTS 493

Query: 183  KAEEPNTASTRAGPGLVKSEEVQASRAEL---GAKVAE-GPKNRAQRLGSGNAGHGYTYE 350
            K EE +T S +    + +SEE Q +RA     GAK AE GP  R+ RLGSGNAG GYT+E
Sbjct: 494  KVEENSTVSNKLASAMARSEEGQVARANHAINGAKGAEEGPTGRS-RLGSGNAGQGYTFE 552

Query: 351  EVKVLFLILMELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVFQEVVEASLLPYIQ 530
            EVKVLFLILM+LC RT  L HP P SQVG NNIQ+ LHYIDG+YTV  EVVEASL P++Q
Sbjct: 553  EVKVLFLILMDLCRRTAALQHPLPISQVGSNNIQVRLHYIDGSYTVLPEVVEASLGPHMQ 612

Query: 531  NMPRPRGADAAGMLLRELELHPPAEEWHKHNMFGGPWSDTE-CDLLDDTLRPSS-SXXXX 704
            NMPRPRGADAAG+LLRELELHPPAEEWH+ NMFGGPWSD E    +DDT + S+ +    
Sbjct: 613  NMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDMGSVDDTPKLSTYADPLE 672

Query: 705  XXXXXXXXXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYLGIMGSRRDVLTATWKTGL 884
                         +GLWPRKRRLSER+AAFGL TSVGLGAYLGIMGSRRDV+TA WKTGL
Sbjct: 673  SNSFENNDTYYGARGLWPRKRRLSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGL 732

Query: 885  EGVWYKCIRCL 917
            EGVWYKCIRCL
Sbjct: 733  EGVWYKCIRCL 743


>emb|CBI41050.3| unnamed protein product [Vitis vinifera]
          Length = 792

 Score =  406 bits (1044), Expect = e-111
 Identities = 208/311 (66%), Positives = 233/311 (74%), Gaps = 6/311 (1%)
 Frame = +3

Query: 3    GTFPGIPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYPDSNMQKPQPVAPG 182
            GTFPG PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR  G A R  D+NM KPQ     
Sbjct: 441  GTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRVIGVAQRNADTNMHKPQATGTS 500

Query: 183  KAEEPNTASTRAGPGLVKSEEVQASRAEL---GAKVAE-GPKNRAQRLGSGNAGHGYTYE 350
            K EE +T S +    + +SEE Q +RA     GAK AE GP  R+ RLGSGNAG GYT+E
Sbjct: 501  KVEENSTVSNKLASAMARSEEGQVARANHAINGAKGAEEGPTGRS-RLGSGNAGQGYTFE 559

Query: 351  EVKVLFLILMELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVFQEVVEASLLPYIQ 530
            EVKVLFLILM+LC RT  L HP P SQVG NNIQ+ LHYIDG+YTV  EVVEASL P++Q
Sbjct: 560  EVKVLFLILMDLCRRTAALQHPLPISQVGSNNIQVRLHYIDGSYTVLPEVVEASLGPHMQ 619

Query: 531  NMPRPRGADAAGMLLRELELHPPAEEWHKHNMFGGPWSDTE-CDLLDDTLRPSS-SXXXX 704
            NMPRPRGADAAG+LLRELELHPPAEEWH+ NMFGGPWSD E    +DDT + S+ +    
Sbjct: 620  NMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDMGSVDDTPKLSTYADPLE 679

Query: 705  XXXXXXXXXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYLGIMGSRRDVLTATWKTGL 884
                         +GLWPRKRRLSER+AAFGL TSVGLGAYLGIMGSRRDV+TA WKTGL
Sbjct: 680  SNSFENNDTYYGARGLWPRKRRLSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGL 739

Query: 885  EGVWYKCIRCL 917
            EGVWYKCIRCL
Sbjct: 740  EGVWYKCIRCL 750


>ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|222848775|gb|EEE86322.1|
            predicted protein [Populus trichocarpa]
          Length = 607

 Score =  398 bits (1022), Expect = e-108
 Identities = 201/305 (65%), Positives = 227/305 (74%), Gaps = 5/305 (1%)
 Frame = +3

Query: 3    GTFPGIPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYP-DSNMQKPQPVAP 179
            GTFPG PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR  GG  R P D+N QKPQ  A 
Sbjct: 204  GTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFAGGTQRNPTDTNAQKPQSGAA 263

Query: 180  GKAEEPNTASTRAGPGLVKSEEVQASRAEL---GAK-VAEGPKNRAQRLGSGNAGHGYTY 347
            GK EE NT S++  P +V+S+E QA R      GAK V EGP  R  R+G+GNAG GY++
Sbjct: 264  GKVEEINTVSSKPAPAVVRSDEGQAVRGSQVVPGAKAVEEGPAGR-HRVGNGNAGQGYSF 322

Query: 348  EEVKVLFLILMELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVFQEVVEASLLPYI 527
            EEV VLFLILM+LC RT  L HP P SQVG +NIQ+ LHYIDGNYTV  EVVEASL P++
Sbjct: 323  EEVTVLFLILMDLCRRTASLGHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHM 382

Query: 528  QNMPRPRGADAAGMLLRELELHPPAEEWHKHNMFGGPWSDTECDLLDDTLRPSSSXXXXX 707
            QNMPRPRGADAAG+LLRELELHPP+EEWH+ NMFGGPWSD E    DDT + +S+     
Sbjct: 383  QNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDIGSDDTSKLNSTNSLDF 442

Query: 708  XXXXXXXXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYLGIMGSRRDVLTATWKTGLE 887
                         GLWPRKRRLSER+AA GL TS GLGAYLGIMGSRRDV+TA WKTGLE
Sbjct: 443  SSLENCDVYYGAHGLWPRKRRLSERDAAVGLNTSAGLGAYLGIMGSRRDVVTAVWKTGLE 502

Query: 888  GVWYK 902
            GVWYK
Sbjct: 503  GVWYK 507


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