BLASTX nr result

ID: Coptis25_contig00020441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020441
         (1496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267...   481   e-133
ref|XP_002511782.1| conserved hypothetical protein [Ricinus comm...   478   e-132
ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132
emb|CBI28665.3| unnamed protein product [Vitis vinifera]              477   e-132
ref|NP_001030933.1| SET domain-containing protein [Arabidopsis t...   451   e-124

>ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267311 [Vitis vinifera]
          Length = 561

 Score =  481 bits (1237), Expect = e-133
 Identities = 254/404 (62%), Positives = 301/404 (74%), Gaps = 15/404 (3%)
 Frame = +2

Query: 2    ESEVQFKDFLWANSIFWTRALNIPFPHSYVFPQAVEEKEGC-PSFGKDSDASRMCGEVSS 178
            + EV F+DFLWANSIFWTRALNIP P SYVFPQ  EE+  C P+  KDS A     ++SS
Sbjct: 168  KGEVHFEDFLWANSIFWTRALNIPLPRSYVFPQIQEEQNSCIPNIIKDSGA--FTDQISS 225

Query: 179  ----SLKDEKVGNRTDV----------ASNSMHGESIWVEGLVPGIDFCNHGLKAATTWE 316
                S  DEK    TDV           S+SM  E +WVEGLVPGIDFCNH LKAA TWE
Sbjct: 226  GNLVSGMDEK---STDVHGFESQVNRGTSSSMQEEILWVEGLVPGIDFCNHDLKAAATWE 282

Query: 317  VDGSGSTTGVPASMYLLSAEKSPFQIDKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMV 496
            VD +G  TGVP SMYLLS E+SP  + KE+ ISYGNKGNEELLYLYGFVIDNNPDDYLMV
Sbjct: 283  VDNTGLKTGVPLSMYLLSVEQSPCHMQKEISISYGNKGNEELLYLYGFVIDNNPDDYLMV 342

Query: 497  HYPIEAFQSLPFADTKGRLLEIQKAEMRCLLPKRLLNHGFFSGVPQQCEDRSTLSDDRIC 676
            HYP+E F+++PF+++KG+LLE QKAEMRCLL K LL+ GFF     + E     +D ++C
Sbjct: 343  HYPMELFKNVPFSESKGQLLEAQKAEMRCLLHKTLLDRGFFPASTLKNEQNGKSTDHQVC 402

Query: 677  NYSWAGQRKMPSYSSKLVFPEDFVIALRTIAMKEEELHQASSLLEELVGSDEERQPSDTE 856
            NYSW+GQRK PSY +KLVFPE F+ ALRTI+M+E+EL + SSLLEEL  S   RQP D+E
Sbjct: 403  NYSWSGQRKTPSYLNKLVFPEAFLTALRTISMEEDELSRVSSLLEELAESG-GRQPLDSE 461

Query: 857  VRAAIWEACGDSGALQLLVDLLQMKMMELEEGSGTEACDTDLLEKAHVMDISEGNSCCDN 1036
             RAA+WEACGDSGALQ+LVDLL +KMM+LEEGSGTE  DT+LLEKA + +I E ++ C  
Sbjct: 462  TRAAVWEACGDSGALQVLVDLLNVKMMDLEEGSGTEDNDTELLEKALMTEIPEQHTSC-- 519

Query: 1037 LMEGLANTMSRNKWSSVIYRRGQKQLVHSFLMEAEHALQLCLSE 1168
                + + MSRN+WSS++YRRGQKQL   FL EAEHALQL LSE
Sbjct: 520  ----IPHKMSRNRWSSIVYRRGQKQLTRLFLKEAEHALQLSLSE 559


>ref|XP_002511782.1| conserved hypothetical protein [Ricinus communis]
            gi|223548962|gb|EEF50451.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 446

 Score =  478 bits (1231), Expect = e-132
 Identities = 243/398 (61%), Positives = 302/398 (75%), Gaps = 10/398 (2%)
 Frame = +2

Query: 2    ESEVQFKDFLWANSIFWTRALNIPFPHSYVFPQAVEEKEG-CPSFGKD-SDASRMCGEVS 175
            ESEV F+DFLWANS+FW+RALNIP PHSYVFPQ  E++E  C +   + S      G++ 
Sbjct: 56   ESEVSFEDFLWANSLFWSRALNIPLPHSYVFPQVEEDQENHCSTIDSELSYNDNSAGDLI 115

Query: 176  SSLKDEKVGNRTDVASNSMHGESIWVEGLVPGIDFCNHGLKAATTWEVDGSGSTTGVPAS 355
            +  KDE+          S  GE++WVEGLVPGIDFCNH LKAA TWEVDG+G  TGVP+S
Sbjct: 116  NE-KDERT------TCTSSQGETVWVEGLVPGIDFCNHDLKAAATWEVDGTGLVTGVPSS 168

Query: 356  MYLLSAEKSPFQIDKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPIEAFQSLPFA 535
            MYLLSAE++P + +KE++ISYGNKGNEELLYLYGFVIDNN DDYLMV+YP+EA Q++PF+
Sbjct: 169  MYLLSAEQTPIKTEKEIFISYGNKGNEELLYLYGFVIDNNTDDYLMVNYPVEAIQNVPFS 228

Query: 536  DTKGRLLEIQKAEMRCLLPKRLLNHGFFSGVPQQCEDRSTLSDDRICNYSWAGQRKMPSY 715
            D+K +LLE QKAEMRCLLPK LL+HGFF     + +       D+  N SW+GQR+ PSY
Sbjct: 229  DSKMQLLEAQKAEMRCLLPKGLLDHGFFPVGTSKNDSNFKCKTDQFGNCSWSGQRETPSY 288

Query: 716  SSKLVFPEDFVIALRTIAMKEEELHQASSLLEELVGSDEERQPSDTEVRAAIWEACGDSG 895
             +KLVFPEDF+ +LRT+AM+E+EL++ SSLLEEL+GS+ ERQP+D+EVRAA+WEACGDSG
Sbjct: 289  VNKLVFPEDFLTSLRTLAMQEDELYKVSSLLEELIGSEGERQPTDSEVRAAVWEACGDSG 348

Query: 896  ALQLLVDLLQMKMMELEEGSGTEACDTDLLEKAHVMDISEGNSCCDNLMEGLANT----- 1060
            ALQLLVDLLQ K++ LEEGSGTE CD++LLEKA   +  E    CDN +     +     
Sbjct: 349  ALQLLVDLLQTKLLNLEEGSGTEDCDSELLEKA---ESPEDLGVCDNNLSSNPESSSATQ 405

Query: 1061 ---MSRNKWSSVIYRRGQKQLVHSFLMEAEHALQLCLS 1165
               MSRN+ +S++YRRGQK+L   FL EAEHALQL LS
Sbjct: 406  LQLMSRNRRASIVYRRGQKELTRLFLKEAEHALQLSLS 443


>ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|222861544|gb|EEE99086.1|
            predicted protein [Populus trichocarpa]
          Length = 551

 Score =  478 bits (1229), Expect = e-132
 Identities = 248/410 (60%), Positives = 292/410 (71%), Gaps = 22/410 (5%)
 Frame = +2

Query: 2    ESEVQFKDFLWANSIFWTRALNIPFPHSYVFPQAVEEKEGCPSFGKDSDASRMCGEVSSS 181
            ESEV F+DFLWANS+FWTRALNIP P SYVFPQ  E+++   S   DS  S     + S 
Sbjct: 153  ESEVCFEDFLWANSVFWTRALNIPLPRSYVFPQVQEDQDSQSSLNIDSGVSHTKALLISG 212

Query: 182  LKDEKVGNRTDVASNSMHGESIWVEGLVPGIDFCNHGLKAATTWEVDGSGSTTGVPASMY 361
             K   V  + D        E++WVEGLVPGIDFCNH LKA  TWEVDG+G TTGVP SMY
Sbjct: 213  SKVPGVDGQFD--------ETVWVEGLVPGIDFCNHDLKAVATWEVDGTGMTTGVPHSMY 264

Query: 362  LLSAEKSPFQIDKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMV--------------- 496
            LLSAEK+PFQ++KE+ ISYGNKGNEELLYLYGFVIDNNPD+YLMV               
Sbjct: 265  LLSAEKTPFQMEKEITISYGNKGNEELLYLYGFVIDNNPDEYLMVMPLFGFCNSDVVLLG 324

Query: 497  -------HYPIEAFQSLPFADTKGRLLEIQKAEMRCLLPKRLLNHGFFSGVPQQCEDRST 655
                   HYP+EA Q++PF+D+K +LLE QKAEMRCLLPKRLL HGFF       +D   
Sbjct: 325  QYFLLDVHYPVEAIQNVPFSDSKMQLLEAQKAEMRCLLPKRLLAHGFFPAGTTSNDDNGK 384

Query: 656  LSDDRICNYSWAGQRKMPSYSSKLVFPEDFVIALRTIAMKEEELHQASSLLEELVGSDEE 835
               D+IC++SW+GQR+MPSY++KLVFPE+F+  LRTIAM+E+EL +ASS LEELVGS+  
Sbjct: 385  GKADKICSFSWSGQRRMPSYANKLVFPEEFLTTLRTIAMQEDELLKASSFLEELVGSEGV 444

Query: 836  RQPSDTEVRAAIWEACGDSGALQLLVDLLQMKMMELEEGSGTEACDTDLLEKAHVMDISE 1015
            RQP+DTEVR A+WEACGDSGALQLL DLLQ K+M LEE  GTE CDT+LLEKA  +   E
Sbjct: 445  RQPTDTEVRTAVWEACGDSGALQLLFDLLQTKVMNLEENFGTEDCDTELLEKAQDVKNIE 504

Query: 1016 GNSCCDNLMEGLANTMSRNKWSSVIYRRGQKQLVHSFLMEAEHALQLCLS 1165
                 D    G    MSRN+WSS++YR+GQKQL   FL EAEH L L LS
Sbjct: 505  HK---DTDESGHYKFMSRNRWSSIVYRKGQKQLARLFLKEAEHVLHLSLS 551


>emb|CBI28665.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  477 bits (1228), Expect = e-132
 Identities = 255/408 (62%), Positives = 300/408 (73%), Gaps = 19/408 (4%)
 Frame = +2

Query: 2    ESEVQFKDFLWANSIFWTRALNIPFPHSYVFPQAVEEKEGC-PSFGKDSDASRMCGEVSS 178
            + EV F+DFLWANSIFWTRALNIP P SYVFPQ  EE+  C P+  KDS A     ++SS
Sbjct: 168  KGEVHFEDFLWANSIFWTRALNIPLPRSYVFPQIQEEQNSCIPNIIKDSGA--FTDQISS 225

Query: 179  ----SLKDEKVGNRTDV----------ASNSMHGESIWVEGLVPGIDFCNHGLKAATTWE 316
                S  DEK    TDV           S+SM  E +WVEGLVPGIDFCNH LKAA TWE
Sbjct: 226  GNLVSGMDEK---STDVHGFESQVNRGTSSSMQEEILWVEGLVPGIDFCNHDLKAAATWE 282

Query: 317  VDGSGSTTGVPASMYLLSAEKSPFQIDKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMV 496
            VD +G  TGVP SMYLLS E+SP  + KE+ ISYGNKGNEELLYLYGFVIDNNPDDYLMV
Sbjct: 283  VDNTGLKTGVPLSMYLLSVEQSPCHMQKEISISYGNKGNEELLYLYGFVIDNNPDDYLMV 342

Query: 497  HYPIEAFQSLPFADTKGRLLEIQKAEMRCLLPKRLLNHGFFSGVPQQCEDRSTLSDDRIC 676
            HYP+E F+++PF+++KG+LLE QKAEMRCLL K LL+ GFF     + E     +D ++C
Sbjct: 343  HYPMELFKNVPFSESKGQLLEAQKAEMRCLLHKTLLDRGFFPASTLKNEQNGKSTDHQVC 402

Query: 677  NYSWAGQRKMPSYSSKLVFPEDFVIALRTIAMKEEELHQASSLLEELVGSDEERQPSDTE 856
            NYSW+GQRK PSY +KLVFPE F+ ALRTI+M+E+EL + SSLLEEL  S   RQP D+E
Sbjct: 403  NYSWSGQRKTPSYLNKLVFPEAFLTALRTISMEEDELSRVSSLLEELAESG-GRQPLDSE 461

Query: 857  VRAAIWEACGDSGALQLLVDLLQMKMMELEEGSGTEACDTDLLEKAHVMDISE----GNS 1024
             RAA+WEACGDSGALQ+LVDLL +KMM+LEEGSGTE  DT+LLEKA + +I E    G  
Sbjct: 462  TRAAVWEACGDSGALQVLVDLLNVKMMDLEEGSGTEDNDTELLEKALMTEIPEQHTSGTD 521

Query: 1025 CCDNLMEGLANTMSRNKWSSVIYRRGQKQLVHSFLMEAEHALQLCLSE 1168
             C      + + MSRN+WSS++YRRGQKQL   FL EAEHALQL LSE
Sbjct: 522  SC------IPHKMSRNRWSSIVYRRGQKQLTRLFLKEAEHALQLSLSE 563


>ref|NP_001030933.1| SET domain-containing protein [Arabidopsis thaliana]
            gi|63003834|gb|AAY25446.1| At1g01920 [Arabidopsis
            thaliana] gi|332189233|gb|AEE27354.1| SET
            domain-containing protein [Arabidopsis thaliana]
          Length = 547

 Score =  451 bits (1161), Expect = e-124
 Identities = 230/393 (58%), Positives = 292/393 (74%), Gaps = 3/393 (0%)
 Frame = +2

Query: 2    ESEVQFKDFLWANSIFWTRALNIPFPHSYVFPQAVEEKEGCPSFGKDSDASRMCGEVSSS 181
            ES+V F+ FLWANS+FW+RALNIP PHS+VFPQ+ ++   C S  +  + + +     +S
Sbjct: 171  ESKVSFEHFLWANSVFWSRALNIPLPHSFVFPQSQDDTGECTSTSESPETAPV-----NS 225

Query: 182  LKDEKVGNRTDVASNSMHGESIWVEGLVPGIDFCNHGLKAATTWEVDGSGSTTGVPASMY 361
             +++++  +   A +   G++IWVEGLVPGIDFCNH LK   TWEVDG GS + VP SMY
Sbjct: 226  NEEKEI--QAQPAPSVGSGDTIWVEGLVPGIDFCNHDLKPVATWEVDGIGSVSRVPFSMY 283

Query: 362  LLSAEKSPFQIDKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPIEAFQSLPFADT 541
            LLS  + P    KE+ ISYGNKGNEELLYLYGFVIDNNPDDYLMVHYP+EA  S+PF+D+
Sbjct: 284  LLSVAQRPIP-KKEISISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPVEAIPSIPFSDS 342

Query: 542  KGRLLEIQKAEMRCLLPKRLLNHGFF---SGVPQQCEDRSTLSDDRICNYSWAGQRKMPS 712
            KG+LLE Q A++RCLLPK +LNHGFF   + V ++ +++ T+   R CN+SW+G+RKMP+
Sbjct: 343  KGQLLEAQNAQLRCLLPKSVLNHGFFPRTTSVIRESDEKETV---RSCNFSWSGKRKMPT 399

Query: 713  YSSKLVFPEDFVIALRTIAMKEEELHQASSLLEELVGSDEERQPSDTEVRAAIWEACGDS 892
            Y +KLVFPEDF+  LRTIAM+EEE+++ S++LEELV S +  QPS+TEVR A+WEACGDS
Sbjct: 400  YMNKLVFPEDFMTGLRTIAMQEEEIYKVSAMLEELVESRQGEQPSETEVRMAVWEACGDS 459

Query: 893  GALQLLVDLLQMKMMELEEGSGTEACDTDLLEKAHVMDISEGNSCCDNLMEGLANTMSRN 1072
            GALQLLVDLL  KMM+LEE SGTE  D  LLE+A V++  E +   D         MSRN
Sbjct: 460  GALQLLVDLLNSKMMKLEENSGTEEQDARLLEEACVLESHEESRDLD------GRRMSRN 513

Query: 1073 KWSSVIYRRGQKQLVHSFLMEAEHALQLCLSEE 1171
            KWSSV+YRRGQKQL    L EAEHAL L LS +
Sbjct: 514  KWSSVVYRRGQKQLTRLLLKEAEHALHLALSSD 546


Top