BLASTX nr result

ID: Coptis25_contig00020431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020431
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33549.3| unnamed protein product [Vitis vinifera]              184   9e-45
ref|XP_002305873.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-45
emb|CAN73956.1| hypothetical protein VITISV_026134 [Vitis vinifera]   183   1e-44
ref|XP_002515460.1| conserved hypothetical protein [Ricinus comm...   182   3e-44
ref|XP_003616389.1| hypothetical protein MTR_5g079680 [Medicago ...   169   2e-40

>emb|CBI33549.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  184 bits (466), Expect = 9e-45
 Identities = 87/138 (63%), Positives = 108/138 (78%)
 Frame = +2

Query: 17  MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 196
           MKRKKW+E EE+TL+ KYSEL T+G L+KLKTREKK++PIA  VN+ HHL DPIT+PF W
Sbjct: 1   MKRKKWSEVEEQTLLTKYSELLTSGTLAKLKTREKKFKPIADHVNSVHHLHDPITFPFKW 60

Query: 197 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVELDTFT 376
           SWRDVSIK+QNMRHQYLGVKQKI+ S+   +F W DG +HW NFLKYK+VFGDVEL+   
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRVSE--DEFNWKDGENHWENFLKYKEVFGDVELEA-- 116

Query: 377 HHHHHKLRVSGAGSMEDE 430
                + ++ G   ++DE
Sbjct: 117 ----KEKKLGGDDDVDDE 130


>ref|XP_002305873.1| predicted protein [Populus trichocarpa] gi|222848837|gb|EEE86384.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  184 bits (466), Expect = 9e-45
 Identities = 86/117 (73%), Positives = 99/117 (84%)
 Frame = +2

Query: 17  MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 196
           MKRKKW+E EE+TL+ KYS+L T+G LSKLKTREKK++PIA  VNT HHLQDPI YPF W
Sbjct: 1   MKRKKWSELEEQTLLSKYSDLLTSGTLSKLKTREKKFRPIADHVNTIHHLQDPIGYPFKW 60

Query: 197 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVELD 367
           SWRDVSIK+QNMRHQYLGVKQKI+ S    +F W DG +HW NFLKYK+VFGDVEL+
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRISK--DEFNWKDGENHWENFLKYKEVFGDVELE 115


>emb|CAN73956.1| hypothetical protein VITISV_026134 [Vitis vinifera]
          Length = 389

 Score =  183 bits (465), Expect = 1e-44
 Identities = 84/117 (71%), Positives = 100/117 (85%)
 Frame = +2

Query: 17  MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 196
           MKRKKW+E EE+TL+ KYSEL T+G L+KLKTREKK++PIA  VN+ HHL DPIT+PF W
Sbjct: 1   MKRKKWSEVEEQTLLTKYSELLTSGTLAKLKTREKKFKPIADHVNSVHHLHDPITFPFKW 60

Query: 197 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVELD 367
           SWRDVSIK+QNMRHQYLGVKQKI+ S+   +F W DG +HW NFLKYK+VFGDVEL+
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRVSE--DEFNWKDGENHWENFLKYKEVFGDVELE 115


>ref|XP_002515460.1| conserved hypothetical protein [Ricinus communis]
           gi|223545404|gb|EEF46909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 391

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/117 (71%), Positives = 100/117 (85%)
 Frame = +2

Query: 17  MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 196
           MKRKKW+E EE+TL+ KYS+L T+G LSKLKTREKK++PIA  VN+ HHLQDPI++PF W
Sbjct: 1   MKRKKWSELEEQTLLTKYSDLLTSGTLSKLKTREKKFRPIADHVNSVHHLQDPISFPFKW 60

Query: 197 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVELD 367
           SWRDVSIK+QNMRHQYLGVKQKI+ S    +F W DG +HW NFLKYK+VFGDVEL+
Sbjct: 61  SWRDVSIKVQNMRHQYLGVKQKIRISK--DEFNWKDGENHWENFLKYKEVFGDVELE 115


>ref|XP_003616389.1| hypothetical protein MTR_5g079680 [Medicago truncatula]
           gi|355517724|gb|AES99347.1| hypothetical protein
           MTR_5g079680 [Medicago truncatula]
          Length = 328

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/116 (66%), Positives = 92/116 (79%)
 Frame = +2

Query: 17  MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 196
           MKRKKW+E EE+TL+ KYSEL  +G L KLKTREKK++PIA  VN  HHL DP T+PF W
Sbjct: 1   MKRKKWSELEEQTLLTKYSELHRSGTLPKLKTREKKFKPIADHVNAVHHLHDPTTFPFKW 60

Query: 197 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVEL 364
           SWRDVSIK+QNMRHQY+GVK KI+++D    F W DG+ HW NFL YK VFGDV++
Sbjct: 61  SWRDVSIKVQNMRHQYIGVKHKIQSND--HGFNWNDGVIHWENFLNYKRVFGDVKI 114


Top