BLASTX nr result

ID: Coptis25_contig00020424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020424
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|2...   142   5e-32
ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246...   140   1e-31
ref|XP_004141811.1| PREDICTED: uncharacterized protein LOC101211...   136   3e-30
ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806...   136   3e-30
ref|XP_004167886.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   134   8e-30

>ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  142 bits (357), Expect = 5e-32
 Identities = 70/111 (63%), Positives = 85/111 (76%)
 Frame = +3

Query: 3   RDISGIKALLTSKARKSFEQDELVLMNSRIPYTIIRAGLLQSTPGGKQGFSFKEGSAAQG 182
           R   GI+AL+ + ARK  E+DE  L+ S IPYTIIR G+LQ TPGG QGFSF++GSA +G
Sbjct: 194 RGSGGIQALMKNNARKLAEKDESTLVASGIPYTIIRVGMLQDTPGGTQGFSFEKGSAEKG 253

Query: 183 KLSKEDAAFICVQALDAVPQRGVTFEVVNGDENISDWKEYLESLIQNMEQR 335
            LSKEDAAFICV+ALD VPQ G TFE VNG+E +SDWKE L  L++  EQ+
Sbjct: 254 SLSKEDAAFICVEALDVVPQIGFTFEAVNGEEKVSDWKERLTRLMEKSEQQ 304


>ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera]
           gi|297743019|emb|CBI35886.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score =  140 bits (354), Expect = 1e-31
 Identities = 66/111 (59%), Positives = 87/111 (78%)
 Frame = +3

Query: 3   RDISGIKALLTSKARKSFEQDELVLMNSRIPYTIIRAGLLQSTPGGKQGFSFKEGSAAQG 182
           R   GI+AL+   ARK  E+DE ++  S IPYTIIRAGLLQ++PGGK+GFSFKEG AA G
Sbjct: 191 RGTGGIQALMQGNARKLAEKDESIVTGSGIPYTIIRAGLLQNSPGGKEGFSFKEGVAATG 250

Query: 183 KLSKEDAAFICVQALDAVPQRGVTFEVVNGDENISDWKEYLESLIQNMEQR 335
           +LSKEDAAFICV+A+D VP+ G+ FEV NG E +SDWKE  ++L++  +++
Sbjct: 251 RLSKEDAAFICVEAVDTVPETGLVFEVANGGEKVSDWKECFKALVEKPDKQ 301


>ref|XP_004141811.1| PREDICTED: uncharacterized protein LOC101211092 [Cucumis sativus]
          Length = 277

 Score =  136 bits (342), Expect = 3e-30
 Identities = 67/112 (59%), Positives = 81/112 (72%)
 Frame = +3

Query: 3   RDISGIKALLTSKARKSFEQDELVLMNSRIPYTIIRAGLLQSTPGGKQGFSFKEGSAAQG 182
           R  SG++ALL   A+K  EQDE VL+ S IPYTII+AG L  TPGG QGFSF+EG A  G
Sbjct: 166 RSASGVQALLKGNAKKMAEQDEAVLVASGIPYTIIQAGSLLDTPGGNQGFSFEEGCATAG 225

Query: 183 KLSKEDAAFICVQALDAVPQRGVTFEVVNGDENISDWKEYLESLIQNMEQRQ 338
            LSKEDAAFICV+A D +P+ G  FEV NG+E +SDWK +L  L++  EQ Q
Sbjct: 226 TLSKEDAAFICVEATDVIPKGGFAFEVANGNEQVSDWKVWLTRLLEKTEQLQ 277


>ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max]
          Length = 312

 Score =  136 bits (342), Expect = 3e-30
 Identities = 65/108 (60%), Positives = 78/108 (72%)
 Frame = +3

Query: 12  SGIKALLTSKARKSFEQDELVLMNSRIPYTIIRAGLLQSTPGGKQGFSFKEGSAAQGKLS 191
           SG ++++ S A+K  EQDE VL  S IPYTIIR G LQ TPGGKQGF+F EG AA G +S
Sbjct: 203 SGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALQDTPGGKQGFTFDEGCAASGSIS 262

Query: 192 KEDAAFICVQALDAVPQRGVTFEVVNGDENISDWKEYLESLIQNMEQR 335
           KEDAAF+CV A D VPQ G  FEV NGD  +SDWKE L +L++   Q+
Sbjct: 263 KEDAAFVCVAAFDCVPQTGFIFEVANGDNKVSDWKECLATLMEKASQK 310


>ref|XP_004167886.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228156 [Cucumis sativus]
          Length = 277

 Score =  134 bits (338), Expect = 8e-30
 Identities = 66/112 (58%), Positives = 81/112 (72%)
 Frame = +3

Query: 3   RDISGIKALLTSKARKSFEQDELVLMNSRIPYTIIRAGLLQSTPGGKQGFSFKEGSAAQG 182
           R  SG++ALL  + +K  EQDE VL+ S IPYTII+AG L  TPGG QGFSF+EG A  G
Sbjct: 166 RSASGVQALLKXQCKKMAEQDEAVLVASGIPYTIIQAGSLLDTPGGNQGFSFEEGCATAG 225

Query: 183 KLSKEDAAFICVQALDAVPQRGVTFEVVNGDENISDWKEYLESLIQNMEQRQ 338
            LSKEDAAFICV+A D +P+ G  FEV NG+E +SDWK +L  L++  EQ Q
Sbjct: 226 TLSKEDAAFICVEATDVIPKGGFAFEVANGNEQVSDWKVWLTRLLEKTEQLQ 277


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