BLASTX nr result

ID: Coptis25_contig00020423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020423
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545029.1| PREDICTED: uncharacterized protein LOC100779...    99   1e-18
ref|XP_003549467.1| PREDICTED: uncharacterized protein LOC100787...    98   3e-18
ref|XP_002273690.1| PREDICTED: uncharacterized protein LOC100245...    98   3e-18
ref|XP_002510551.1| conserved hypothetical protein [Ricinus comm...    97   6e-18
ref|XP_002306941.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16

>ref|XP_003545029.1| PREDICTED: uncharacterized protein LOC100779434 [Glycine max]
          Length = 113

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 55/121 (45%), Positives = 76/121 (62%)
 Frame = +2

Query: 398 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVLAALTWDVSRKP 577
           + D V++N+T LY+ VIA +K +  + GR+FSG FV++VST  VA I++A LTWDVSRK 
Sbjct: 3   VSDAVMSNLTVLYVAVIACIKAYGFLCGRSFSGWFVLVVSTAAVALILVATLTWDVSRKA 62

Query: 578 TYAAPLSADPYCYYADSTSSSRQNDNREKPRGICWHDGVSVQSTVSQIRFQLPQQPLPFI 757
           TYA         +  D       + +     GICWH GV+V+S  SQ+RF+LPQ  LP+ 
Sbjct: 63  TYA---------FATDQPPPPPHHTHEACKGGICWH-GVAVRSPASQVRFRLPQN-LPYT 111

Query: 758 T 760
           T
Sbjct: 112 T 112


>ref|XP_003549467.1| PREDICTED: uncharacterized protein LOC100787853 [Glycine max]
          Length = 117

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
 Frame = +2

Query: 398 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVLAALTWDVSRKP 577
           + D VV+N+T LY+ +I  +K +  + GR+FSGCFV++ ST  VA I++A LTWDVSRK 
Sbjct: 3   VSDAVVSNLTLLYVALILSIKAYGFLCGRSFSGCFVLVASTAAVALILVATLTWDVSRKA 62

Query: 578 TYA-----APLSADPYCYYADSTSSSRQNDNREKPRGICWHDGVSVQSTVSQIRFQLPQQ 742
           TYA      P    P  ++   T             GICWH GV+V+S  SQ+RF+LPQ 
Sbjct: 63  TYAFAAVQPPPPPPPPPHHTHETCKG----------GICWH-GVAVRSPASQVRFRLPQN 111

Query: 743 PLPFIT 760
            LP+ T
Sbjct: 112 -LPYTT 116


>ref|XP_002273690.1| PREDICTED: uncharacterized protein LOC100245337 [Vitis vinifera]
          Length = 106

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 54/116 (46%), Positives = 72/116 (62%)
 Frame = +2

Query: 398 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVLAALTWDVSRKP 577
           I D VVAN+T++YL  IA +K + + TGR+FSG FV++ ST  V  I++  L WDVSRK 
Sbjct: 3   ISDAVVANLTTIYLVAIAAIKAYGLATGRSFSGGFVLVTSTAAVVLILIGTLAWDVSRKA 62

Query: 578 TYAAPLSADPYCYYADSTSSSRQNDNREKPRGICWHDGVSVQSTVSQIRFQLPQQP 745
           TYA                 SR + +     GICWH GV+V+S+ SQ+RF+LPQQP
Sbjct: 63  TYAL----------------SRDHVHEMCRGGICWH-GVAVKSSASQVRFRLPQQP 101


>ref|XP_002510551.1| conserved hypothetical protein [Ricinus communis]
           gi|223551252|gb|EEF52738.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 51/118 (43%), Positives = 76/118 (64%)
 Frame = +2

Query: 398 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVLAALTWDVSRKP 577
           + D V+ N+T++Y+ VIA +K + ++ GR+FSG FV+++ST VV  I++ +LTWDVSRK 
Sbjct: 3   VSDAVIGNLTTIYVAVIAGIKAYGLVCGRSFSGGFVLILSTSVVGLILIGSLTWDVSRKA 62

Query: 578 TYAAPLSADPYCYYADSTSSSRQNDNREKPRGICWHDGVSVQSTVSQIRFQLPQQPLP 751
           TYA  +S D + +  +               GICWH GV+V+S  SQ+RF+LPQ   P
Sbjct: 63  TYA--ISRDHHIHVHEMCKG-----------GICWH-GVAVRSPASQVRFRLPQHHQP 106


>ref|XP_002306941.1| predicted protein [Populus trichocarpa] gi|222856390|gb|EEE93937.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 48/114 (42%), Positives = 70/114 (61%)
 Frame = +2

Query: 398 ICDGVVANMTSLYLGVIAVMKLFSVITGRNFSGCFVVLVSTFVVASIVLAALTWDVSRKP 577
           + D V+ N+T++Y+ VIA +K++ ++ GR+FSG FV+++ST VV  I+   L WD+SRK 
Sbjct: 3   LSDAVIGNLTTIYVAVIAGIKVYGLVCGRSFSGGFVLILSTIVVGLILTGTLAWDISRKA 62

Query: 578 TYAAPLSADPYCYYADSTSSSRQNDNREKPRGICWHDGVSVQSTVSQIRFQLPQ 739
           TYA               S    N +     GICWH GV+V+S  SQ+RF+LPQ
Sbjct: 63  TYA--------------ISRDHVNVHEMCKGGICWH-GVAVRSPASQVRFRLPQ 101


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