BLASTX nr result

ID: Coptis25_contig00020419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020419
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526751.1| conserved hypothetical protein [Ricinus comm...   177   2e-42
ref|XP_003519046.1| PREDICTED: uncharacterized protein LOC100817...   175   6e-42
ref|XP_003535852.1| PREDICTED: uncharacterized protein LOC100811...   174   1e-41
gb|ADR71310.1| hypothetical protein 32 [Hevea brasiliensis]           173   3e-41
emb|CBI29893.3| unnamed protein product [Vitis vinifera]              171   1e-40

>ref|XP_002526751.1| conserved hypothetical protein [Ricinus communis]
           gi|223533940|gb|EEF35665.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score =  177 bits (449), Expect = 2e-42
 Identities = 83/108 (76%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +1

Query: 40  MSTPKSISAASGMLRNRLKSSIRTRSGGE-GPSRWSTQGHQEKPNGYLFNRTPPPPGQSR 216
           M  P+ ++AAS MLR RL S++RTR G   GPSRW++ GH EKP GYLFNRTPP PGQSR
Sbjct: 1   MPVPQPLTAASTMLRQRLSSTLRTRGGAAAGPSRWTSPGHDEKPKGYLFNRTPPAPGQSR 60

Query: 217 KWEDWELPCYITSFLAIVILGVGLNAKPDFTIETWAHKKALERLESQK 360
           KWEDWELPCYITSFL IVILGVGLNAKPD TIETWAH+KALERLES+K
Sbjct: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLESEK 108


>ref|XP_003519046.1| PREDICTED: uncharacterized protein LOC100817993 [Glycine max]
          Length = 128

 Score =  175 bits (444), Expect = 6e-42
 Identities = 80/110 (72%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = +1

Query: 40  MSTPKSISAASGMLRNRLKSSIRTRSGGE-GPSRWSTQGHQEKPNGYLFNRTPPPPGQSR 216
           M  P  +S+AS  LR RL+ S+RTR G E GPSRW++ GH+E+P GYLFNRTPPPPGQSR
Sbjct: 1   MPPPTPLSSASAALRRRLQQSLRTRGGAESGPSRWTSPGHEERPKGYLFNRTPPPPGQSR 60

Query: 217 KWEDWELPCYITSFLAIVILGVGLNAKPDFTIETWAHKKALERLESQKAL 366
           KWEDWELPCY+TSFL IVILGVGLNAKPD TIETWAH+KALERL+ + +L
Sbjct: 61  KWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHEKALERLKIENSL 110


>ref|XP_003535852.1| PREDICTED: uncharacterized protein LOC100811405 [Glycine max]
          Length = 130

 Score =  174 bits (441), Expect = 1e-41
 Identities = 79/110 (71%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = +1

Query: 40  MSTPKSISAASGMLRNRLKSSIRTRSGGE-GPSRWSTQGHQEKPNGYLFNRTPPPPGQSR 216
           M  P  +S+AS  LR RL+ S+RTR G E GPSRW++ GH+E+P GYLFNRTPPPPGQ+R
Sbjct: 1   MPPPTPLSSASAALRRRLQQSLRTRGGAESGPSRWTSPGHEERPKGYLFNRTPPPPGQAR 60

Query: 217 KWEDWELPCYITSFLAIVILGVGLNAKPDFTIETWAHKKALERLESQKAL 366
           KWEDWELPCY+TSFL IVILGVGLNAKPD TIETWAH+KALERL+ + +L
Sbjct: 61  KWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHEKALERLKIENSL 110


>gb|ADR71310.1| hypothetical protein 32 [Hevea brasiliensis]
          Length = 118

 Score =  173 bits (438), Expect = 3e-41
 Identities = 80/108 (74%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +1

Query: 40  MSTPKSISAASGMLRNRLKSSIRTRSGGE-GPSRWSTQGHQEKPNGYLFNRTPPPPGQSR 216
           M + +  + AS MLR RL SS+RTR G   GPSRW++ GH+E+P GYLFNRTPPPPGQSR
Sbjct: 1   MPSQQPFTTASSMLRQRLASSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSR 60

Query: 217 KWEDWELPCYITSFLAIVILGVGLNAKPDFTIETWAHKKALERLESQK 360
           KWEDWELPCYITSFL IVILGVGLNAKPD +IETWAH+KALERLE +K
Sbjct: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLSIETWAHQKALERLEMEK 108


>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  171 bits (432), Expect = 1e-40
 Identities = 76/109 (69%), Positives = 94/109 (86%), Gaps = 1/109 (0%)
 Frame = +1

Query: 40  MSTPKSISAASGMLRNRLKSSIRTRSGGE-GPSRWSTQGHQEKPNGYLFNRTPPPPGQSR 216
           M + K  ++A+G LRNRL  S+RTR GGE GPSRW++ GHQ++PNGYLFNRTP PPGQ+R
Sbjct: 673 MPSAKPFTSAAGALRNRLLPSLRTRGGGESGPSRWTSPGHQDRPNGYLFNRTPLPPGQTR 732

Query: 217 KWEDWELPCYITSFLAIVILGVGLNAKPDFTIETWAHKKALERLESQKA 363
           +WEDWELPCY+TSFL ++ILGVGL+AKPD TIETWAH+KALERL S+ +
Sbjct: 733 QWEDWELPCYVTSFLTVIILGVGLSAKPDLTIETWAHQKALERLASESS 781


Top