BLASTX nr result

ID: Coptis25_contig00020414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020414
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160727.1| PREDICTED: transcription factor bHLH51-like ...    79   4e-13
emb|CBI25454.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002316199.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002272668.2| PREDICTED: transcription factor bHLH51-like ...    77   1e-12
ref|XP_002862876.1| hypothetical protein ARALYDRAFT_497265 [Arab...    76   2e-12

>ref|XP_004160727.1| PREDICTED: transcription factor bHLH51-like [Cucumis sativus]
          Length = 247

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
 Frame = -3

Query: 215 ILPWPAQSSTPNFLAQG-YYPSSSSAS----VEDRGATASKSHSQAEKRRRERINGHLST 51
           +LPW      P F +   ++PS S+ S    VEDR A+ASKSHSQAEKRRR+RIN  L+T
Sbjct: 31  LLPWMIN---PQFSSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLAT 87

Query: 50  LRRLVPRSEKLDKAAL 3
           LR+L+P+S+K+DKAAL
Sbjct: 88  LRKLIPKSDKMDKAAL 103


>emb|CBI25454.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
 Frame = -3

Query: 299 LFMEKLSRLGWSEEAGQFQYHEVNNEPFILPW-PAQSSTPNFLAQGYYPSSS----SASV 135
           L ME     GW++EA   Q         +LPW P    + +F   G+ PS S      + 
Sbjct: 44  LDMENCLYSGWAQEADCTQCDAAP----VLPWLPPPHVSASFQFHGF-PSWSLPVEKMAT 98

Query: 134 EDRG----ATASKSHSQAEKRRRERINGHLSTLRRLVPRSEKLDKAAL 3
           EDR     ATASKSHSQAEKRRR+RIN  L+TLR+L+P+SEK+DKAAL
Sbjct: 99  EDRSDERTATASKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAAL 146


>ref|XP_002316199.1| predicted protein [Populus trichocarpa] gi|222865239|gb|EEF02370.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
 Frame = -3

Query: 233 VNNEPFILPWPAQSS-TPNFLAQGYYPSSS---SASVEDRGATASKSHSQAEKRRRERIN 66
           V +E F++P P+ +S + NF   G+ PS S     + ED+ A++SKSHSQAEKRRR+RIN
Sbjct: 25  VYDESFLVPCPSHASASANFQVYGF-PSWSVPLQEASEDKAASSSKSHSQAEKRRRDRIN 83

Query: 65  GHLSTLRRLVPRSEKLDKAAL 3
             L  LR+LVP+SEK+DKAAL
Sbjct: 84  AQLGILRKLVPKSEKMDKAAL 104


>ref|XP_002272668.2| PREDICTED: transcription factor bHLH51-like [Vitis vinifera]
          Length = 252

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
 Frame = -3

Query: 293 MEKLSRLGWSEEAGQFQYHEVNNEPFILPW-PAQSSTPNFLAQGYYPSSS----SASVED 129
           ME     GW++EA   Q         +LPW P    + +F   G+ PS S      + ED
Sbjct: 1   MENCLYSGWAQEADCTQCDAAP----VLPWLPPPHVSASFQFHGF-PSWSLPVEKMATED 55

Query: 128 RG----ATASKSHSQAEKRRRERINGHLSTLRRLVPRSEKLDKAAL 3
           R     ATASKSHSQAEKRRR+RIN  L+TLR+L+P+SEK+DKAAL
Sbjct: 56  RSDERTATASKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAAL 101


>ref|XP_002862876.1| hypothetical protein ARALYDRAFT_497265 [Arabidopsis lyrata subsp.
           lyrata] gi|297308638|gb|EFH39135.1| hypothetical protein
           ARALYDRAFT_497265 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 11/84 (13%)
 Frame = -3

Query: 221 PFILPWPAQSSTPN-----------FLAQGYYPSSSSASVEDRGATASKSHSQAEKRRRE 75
           P+++ W  QS +P+           F + GY+P+       ++  + S+SH QAEKRRR+
Sbjct: 16  PYMVSWSLQSESPDSDWSRFNLGFSFSSSGYFPADDCVGGIEKAESLSRSHRQAEKRRRD 75

Query: 74  RINGHLSTLRRLVPRSEKLDKAAL 3
           RIN HL+ LR+LVP S+KLDKAAL
Sbjct: 76  RINSHLTALRKLVPNSDKLDKAAL 99


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