BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020411
         (1432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34155.3| unnamed protein product [Vitis vinifera]              358   2e-96
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   358   3e-96
ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797...   340   7e-91
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra...   328   2e-87
ref|XP_003591404.1| Mediator of RNA polymerase II transcription ...   315   2e-83

>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  358 bits (919), Expect = 2e-96
 Identities = 220/482 (45%), Positives = 274/482 (56%), Gaps = 7/482 (1%)
 Frame = +2

Query: 2    FSSIGKFLGLQVYEQGLAAVKIPKVILNGSGLLLMGFPQCGSSYFLLMQXXXXXXXXXXX 181
            F+SIG FLGL+VYE G AAVK+PK ILNGS LLLMGFP CGSSYFLLMQ           
Sbjct: 507  FASIGSFLGLEVYEHGFAAVKLPKHILNGSNLLLMGFPDCGSSYFLLMQLDKDFKPLFKL 566

Query: 182  XETQQDPGGKFHT-DESNHVLRFNNIDIGQMQMLEDELNLSLLDWEQLISSLPNVLGSNQ 358
             ETQ DP GK  +  + NHV+R   IDIGQMQM EDELNLSL+DW +L+S LPN    NQ
Sbjct: 567  LETQPDPSGKSSSFGDMNHVIRIKKIDIGQMQMFEDELNLSLVDWGKLLSFLPNAGVPNQ 626

Query: 359  TSEHGLLPEFGLEASMQTAAGXXXXXXXXXXXXXXXLEKGTVASPYPVQXXXXXXXXXXP 538
            TSEHGLL EF LE+SM    G               LEKG    P+ V           P
Sbjct: 627  TSEHGLLSEFSLESSMHNP-GCPPTSFSSIVDEVFELEKGASLPPFSVPNLSSSYSS--P 683

Query: 539  VTNFGSVQMNYQKIKGSFGGPQLSNSLYPANNLKGFTXXXXXXXXXXXXXXXXXXXXXXX 718
             ++FG+  MN          P    SLY + N+KG                         
Sbjct: 684  GSHFGAGPMNLP-------APHYGGSLYSSGNMKG------------------------- 711

Query: 719  XXXDQDLSSLRSTHAVEAGSAMDEDQVQLLNESPKDVVXXXXXXXXXXXXXXXXXXXAGP 898
                    S++S+ ++ +G+ MDED ++LL++S K+ V                      
Sbjct: 712  --------SMQSS-SIGSGTTMDEDHLRLLSDSSKEAV---------------------- 740

Query: 899  SARPNELGSPPTGNIMGSNRAGGSNSWTTTPVCQVPEFGLPHNSGFNVL-KHDKAPPKRS 1075
                              +RA GS+SW T+P  Q P+    H S  +V+ K D    KRS
Sbjct: 741  ----------------SGSRAAGSSSWVTSPTSQAPDSANFHGSSHDVVSKQDTHSRKRS 784

Query: 1076 ISDVLSLVPSLEGVKV----CKRRKLSETALYHAPVSQ-VVSSDAIRKMEGYTYGNLLAE 1240
            +SD+L L+PSL+ ++      KRRK+SE+A    P+SQ ++SS+   K EGY+YGNL+AE
Sbjct: 785  VSDMLDLIPSLQNLEANTRFYKRRKISESAHTLQPLSQALISSEIACKTEGYSYGNLIAE 844

Query: 1241 ANKGTAPSNIYVTALLHVIRHCSLCIKHARLTSQMDALDIPYVEEVGLRVPSSNLWFRLP 1420
            ANKG APS++YV+ALLHV+RHCSLCIKHARLTSQM+ALDIPYVEEVGLR  SSNLWFRLP
Sbjct: 845  ANKGNAPSSVYVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLRNASSNLWFRLP 904

Query: 1421 FA 1426
            F+
Sbjct: 905  FS 906


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  358 bits (918), Expect = 3e-96
 Identities = 225/487 (46%), Positives = 276/487 (56%), Gaps = 12/487 (2%)
 Frame = +2

Query: 2    FSSIGKFLGLQVYEQGLAAVKIPKVILNGSGLLLMGFPQCGSSYFLLMQXXXXXXXXXXX 181
            F+SIG FLGL+VYE G AAVK+PK ILNGS LLLMGFP CGSSYFLLMQ           
Sbjct: 508  FASIGSFLGLEVYEHGFAAVKLPKHILNGSNLLLMGFPDCGSSYFLLMQLDKDFKPLFKL 567

Query: 182  XETQQDPGGKFHT-DESNHVLRFNNIDIGQMQMLEDELNLSLLDWEQLISSLPNVLGSNQ 358
             ETQ DP GK  +  + NHV+R   IDIGQMQM EDELNLSL+DW +L+S LPN    NQ
Sbjct: 568  LETQPDPSGKSSSFGDMNHVIRIKKIDIGQMQMFEDELNLSLVDWGKLLSFLPNAGVPNQ 627

Query: 359  TSEHGLLPEFGLEASMQTAAGXXXXXXXXXXXXXXXLEKGTVASPYPVQXXXXXXXXXXP 538
            TSEHGLL EF LE+SM    G               LEKG    P+ V           P
Sbjct: 628  TSEHGLLSEFSLESSMHN-PGCPPTSFSSIVDEVFELEKGASLPPFSV--PNLSSSYSSP 684

Query: 539  VTNFGSVQMNYQKIKGSFGGPQLS----NSLYPANNLKGFTXXXXXXXXXXXXXXXXXXX 706
             ++FG+  MN   +K     P ++     SLY + N+KG                     
Sbjct: 685  GSHFGAGPMNLPGMKAGASSPNVAPHYGGSLYSSGNMKGSMQSSSVSLQSSAPVRSAAGK 744

Query: 707  XXXXXXXDQDLSSLRSTHAVEAGS--AMDEDQVQLLNESPKDVVXXXXXXXXXXXXXXXX 880
                   DQDL+SLRS H++E GS   MDED ++LL++S K+ V                
Sbjct: 745  KLSASKSDQDLASLRSPHSLEIGSGTTMDEDHLRLLSDSSKEAV---------------- 788

Query: 881  XXXAGPSARPNELGSPPTGNIMGSNRAGGSNSWTTTPVCQVPEFGLPHNSGFNVLKHDKA 1060
               +G  A       P + N  GS+                      H+    V K D  
Sbjct: 789  ---SGTQA-------PDSANFHGSS----------------------HDV---VSKQDTH 813

Query: 1061 PPKRSISDVLSLVPSLEGV----KVCKRRKLSETALYHAPVSQ-VVSSDAIRKMEGYTYG 1225
              KRS+SD+L L+PSL+ +    +  KRRK+SE+A    P+SQ ++SS+   K EGY+YG
Sbjct: 814  SRKRSVSDMLDLIPSLQNLEANTRFYKRRKISESAHTLQPLSQALISSEIACKTEGYSYG 873

Query: 1226 NLLAEANKGTAPSNIYVTALLHVIRHCSLCIKHARLTSQMDALDIPYVEEVGLRVPSSNL 1405
            NL+AEANKG APS++YV+ALLHV+RHCSLCIKHARLTSQM+ALDIPYVEEVGLR  SSNL
Sbjct: 874  NLIAEANKGNAPSSVYVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLRNASSNL 933

Query: 1406 WFRLPFA 1426
            WFRLPF+
Sbjct: 934  WFRLPFS 940


>ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max]
          Length = 1813

 Score =  340 bits (871), Expect = 7e-91
 Identities = 212/507 (41%), Positives = 285/507 (56%), Gaps = 31/507 (6%)
 Frame = +2

Query: 2    FSSIGKFLGLQVYEQGLAAVKIPKVILNGSGLLLMGFPQCGSSYFLLMQXXXXXXXXXXX 181
            F+SIG+ LGL+VYE     VKIPK + NGS +LLMGFP CGSSYFLLMQ           
Sbjct: 507  FASIGRVLGLEVYEHEFNTVKIPKNVSNGSAMLLMGFPDCGSSYFLLMQLDKDFKPLFKL 566

Query: 182  XETQQDPGGKFH-TDESNHVLRFNNIDIGQMQMLEDELNLSLLDWEQLISSLPNVLGSNQ 358
             ETQ +P  K + + E N VLR   IDIGQMQ+ EDE+NLSL+DW +L S LPN +  NQ
Sbjct: 567  LETQPNPSVKDNLSGELNQVLRIKEIDIGQMQVHEDEMNLSLVDWGKLRSVLPNAVCPNQ 626

Query: 359  TSEHGLLPEFGLEASMQTAAGXXXXXXXXXXXXXXXLEKGTVASPYPVQXXXXXXXXXXP 538
            TS H    +  LE S+Q A G               LEKG+   P+ V+          P
Sbjct: 627  TSGHEFFSDIRLENSIQIARGHPSGFSSLVDEVFG-LEKGSSTPPFSVKNLSSSVNTSLP 685

Query: 539  VTNFGSVQMNYQKIKGSFGGPQ----------------------LSNSLYPANNLKGFTX 652
             + +GSV M    +K     P+                       S SL+ + ++KG   
Sbjct: 686  -SQYGSVPMTLHSLKAGSPSPKWEVGMQMPLVSNVTKASSATNHYSGSLFSSGSVKGPVQ 744

Query: 653  XXXXXXXXXXXXXXXXXXXXXXXXXDQDLSSLRSTHAVEAGS--AMDEDQVQLLNESPKD 826
                                     +QDL+SL+S H+V++ S  AMDE+Q+++ +++  D
Sbjct: 745  SSSVGSIPTGQGRNSAGTKLSASKSEQDLASLKSLHSVDSSSSAAMDEEQLRVFSDNSND 804

Query: 827  VVXXXXXXXXXXXXXXXXXXXAGPSARPNELGSPPTGNIMGSNRAGGSNSWTTTPVCQVP 1006
             +                   + P++RPN       G  + S +A GS S  TTPV Q  
Sbjct: 805  ALAGSRSSRLLSPPRPTGSRMSIPNSRPN-------GPQVESFKAAGSGSCATTPVSQTL 857

Query: 1007 EFGLPHNSGFNVL-KHDKAPPKRSISDVLSLVPSLEGVK----VCKRRKLSETALYHAPV 1171
            E  + +N+G +V  K+D+   KR+ SD+L+L+PSL+GV+    +CK+RK+S++A     +
Sbjct: 858  ESTVSYNTGEDVTSKNDRKSGKRTASDMLTLIPSLQGVESNSGICKKRKISDSAGCQLSL 917

Query: 1172 SQ-VVSSDAIRKMEGYTYGNLLAEANKGTAPSNIYVTALLHVIRHCSLCIKHARLTSQMD 1348
             Q V+S++ I + EGY+YG+L+AEANKG  PS+IYV ALLHV+RHCSLCIKHARLTSQMD
Sbjct: 918  PQGVMSAEIIPRTEGYSYGSLIAEANKGNVPSSIYVAALLHVVRHCSLCIKHARLTSQMD 977

Query: 1349 ALDIPYVEEVGLRVPSSNLWFRLPFAR 1429
            ALDI YVEEVGLR  SSN+WFRLP AR
Sbjct: 978  ALDISYVEEVGLRSGSSNIWFRLPLAR 1004


>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like, partial [Cucumis sativus]
          Length = 1332

 Score =  328 bits (842), Expect = 2e-87
 Identities = 216/487 (44%), Positives = 276/487 (56%), Gaps = 10/487 (2%)
 Frame = +2

Query: 2    FSSIGKFLGLQVYEQGLAAVKIPKVILNGSGLLLMGFPQCGSSYFLLMQXXXXXXXXXXX 181
            F+SI +FLGL+VYE G +AV++PK I NGS +LLMGFP CG+ YFLLMQ           
Sbjct: 48   FASISRFLGLEVYENGFSAVRLPKNISNGSSMLLMGFPDCGNLYFLLMQLDKDFKPQFKL 107

Query: 182  XETQQDPGGKFH-TDESNHVLRFNNIDIGQMQMLEDELNLSLLDWEQLISSLPNVLGSNQ 358
             ET+ DP GK     + N+V+R   ID+ Q Q+LEDELNLSLLDW +L   LPN  G NQ
Sbjct: 108  LETKPDPSGKARGLSDLNNVIRVKKIDVDQTQILEDELNLSLLDWGKLFPLLPNSAG-NQ 166

Query: 359  TSEHGLLPEFGLEASMQTAAGXXXXXXXXXXXXXXXLEKGTVASPYPVQXXXXXXXXXXP 538
            T E+GLLP+ G++ ++Q A G               LEKG    P P            P
Sbjct: 167  TPENGLLPDIGIDGALQIA-GYPPSSFSSVVDEVFELEKG----PPPGVPSPKWEVGMQP 221

Query: 539  VTNFGSVQMNYQKIKGSFGGPQLSN-SLYPANNLKGFTXXXXXXXXXXXXXXXXXXXXXX 715
                 S   N  K+      P  SN SLY A+NLKG                        
Sbjct: 222  -----SQGNNVAKLSNI---PSHSNGSLYSASNLKGPVPSTSMGSISSGPGRGAATRRLS 273

Query: 716  XXXXDQDLSSLRSTHAVEAGS--AMDEDQVQLLNESPKDVVXXXXXXXXXXXXXXXXXXX 889
                +QDL+SLR T+ VE GS  ++D+D + + +++ KD V                   
Sbjct: 274  NSKSEQDLTSLRYTNPVEGGSYTSLDDDHISMPSDTSKDGVYANRSSRLLSPTPHGGPRI 333

Query: 890  AGPSARPNELGSPPTGNIMGSNRAGGSNSWTTTPVCQVPEF--GLPHNSGFNVLKHDKAP 1063
            +G S +PN   S PT    GS R  GS S  +TPV Q  +      + SG   LK D   
Sbjct: 334  SG-SIKPNGSRSSPTAAPTGSLRPSGSCSSVSTPVSQNQDTCSSPVYESG---LKSD-CS 388

Query: 1064 PKRSISDVLSLVPSLEGVK----VCKRRKLSETALYHAPVSQVVSSDAIRKMEGYTYGNL 1231
             KR+ SD+L+L+PSL+G+     + KRRK+SE+A +  P SQ++ S  +     Y+YGNL
Sbjct: 389  RKRTASDMLNLIPSLKGIDAYNGLSKRRKVSESARFSKPSSQLLISKEMVSRTEYSYGNL 448

Query: 1232 LAEANKGTAPSNIYVTALLHVIRHCSLCIKHARLTSQMDALDIPYVEEVGLRVPSSNLWF 1411
            +AEANKG APS+ YV+ALLHVIRHCSLCIKHARLTSQMDALDIP+VEEVGLR  S+N+WF
Sbjct: 449  IAEANKGAAPSSTYVSALLHVIRHCSLCIKHARLTSQMDALDIPFVEEVGLRNASTNIWF 508

Query: 1412 RLPFARE 1432
            RLPFAR+
Sbjct: 509  RLPFARD 515


>ref|XP_003591404.1| Mediator of RNA polymerase II transcription subunit [Medicago
            truncatula] gi|355480452|gb|AES61655.1| Mediator of RNA
            polymerase II transcription subunit [Medicago truncatula]
          Length = 1765

 Score =  315 bits (806), Expect = 2e-83
 Identities = 205/485 (42%), Positives = 262/485 (54%), Gaps = 9/485 (1%)
 Frame = +2

Query: 2    FSSIGKFLGLQVYEQGLAAVKIPKVILNGSGLLLMGFPQCGSSYFLLMQXXXXXXXXXXX 181
            F+SIG+ LGL+VYE GL  VK PK   NGS +L+MGFP  GSSYFLLMQ           
Sbjct: 518  FASIGRVLGLEVYEHGLNTVKNPKTFFNGSTMLMMGFPDSGSSYFLLMQLDKKFNPLFKL 577

Query: 182  XETQQDPGGKFHT-DESNHVLRFNNIDIGQMQMLEDELNLSLLDWEQLISSLPNVLGSNQ 358
             ET+ DP GK +   + N VLRF  IDI QMQ+LEDE+NLSL+DWE+L S L N    NQ
Sbjct: 578  LETEPDPSGKDNIFGDLNQVLRFKKIDIAQMQVLEDEMNLSLVDWEKLHSILSNTACPNQ 637

Query: 359  TSEHGLLPEFGLEASMQTAAGXXXXXXXXXXXXXXXLEKGTVASPYPVQXXXXXXXXXXP 538
             S HGL  +  L+ S+ TA G               LEKG+   P+PVQ          P
Sbjct: 638  MSGHGLYSDIRLQNSIHTARGHHASGFSSLVDDVFGLEKGSSVPPFPVQNISSPLNTSLP 697

Query: 539  VTNFGSVQMNYQKIKGSFGGPQLSNSLYPANNLKGFTXXXXXXXXXXXXXXXXXXXXXXX 718
              ++GS+           G  Q + SL+ +  +KG                         
Sbjct: 698  F-HYGSLP--------KAGNIQYNGSLFSSGGVKGLVQSSSVGSLLTGQGRSTVGKKLPA 748

Query: 719  XXXDQDLSSLRSTHAVEAGS--AMDEDQVQLLNESPKDVVXXXXXXXXXXXXXXXXXXXA 892
               +QDL+S++S H+V+  S  AMDED                                A
Sbjct: 749  LKSEQDLTSVKSPHSVDISSYTAMDEDTAN----------------------------DA 780

Query: 893  GPSARPNELGSP-PTGNIMGSNRAGGSNSWTTTPVCQVPEFGLPHNSGFNVLKHDKAPPK 1069
               +RP+ L  P P  + M S     S    TTPV Q P+     +S   + +HDK   K
Sbjct: 781  LSGSRPSLLSPPWPISSQMSSP---SSRPNATTPVSQGPDTVNFSSSEDVISEHDKRSRK 837

Query: 1070 RSISDVLSLVPSLEG-VK---VCKRRKLSETALYHAPVSQ-VVSSDAIRKMEGYTYGNLL 1234
            R+ SD+L+L+PSL+G VK   +CKRRK+S+       + Q  ++ + I + EG +YG+L+
Sbjct: 838  RTTSDMLNLIPSLQGFVKNQGICKRRKISDPCGSQLALRQGSITPEMIPRAEGCSYGSLI 897

Query: 1235 AEANKGTAPSNIYVTALLHVIRHCSLCIKHARLTSQMDALDIPYVEEVGLRVPSSNLWFR 1414
            AEANKG APS+IYV ALLHV+RHCSLCIKHARLTSQMDAL+I YVEEVGLR  S N+WFR
Sbjct: 898  AEANKGNAPSSIYVAALLHVVRHCSLCIKHARLTSQMDALEISYVEEVGLRRESFNIWFR 957

Query: 1415 LPFAR 1429
            LPFAR
Sbjct: 958  LPFAR 962