BLASTX nr result

ID: Coptis25_contig00020407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020407
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168994.1| PREDICTED: DUF246 domain-containing protein ...    89   5e-16
emb|CBI16922.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002281879.1| PREDICTED: DUF246 domain-containing protein ...    86   2e-15
ref|XP_002331262.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002330934.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14

>ref|XP_004168994.1| PREDICTED: DUF246 domain-containing protein At1g04910-like, partial
           [Cucumis sativus]
          Length = 638

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 63/136 (46%), Positives = 72/136 (52%), Gaps = 22/136 (16%)
 Frame = +2

Query: 59  MKWAALVGLSLSAVFLCAHFPLFD-TGESIALHQTSIT--GW--------------LYRR 187
           MKW  LVG+ LSA  L  HF L   T +SI+  Q+SIT   W              L+RR
Sbjct: 13  MKWVGLVGIVLSAFSLFTHFFLARFTQDSISEFQSSITIFSWRPVFEHADFSPTSPLFRR 72

Query: 188 FCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDAGLLNAI 352
              P R      P A     Y    LQ+N +IFVRIQ   HE+ N ICD  V A LLNA 
Sbjct: 73  LWGPVRRLETLHPDANPRQHYPDPSLQSNGFIFVRIQGGFHEIRNSICDVVVIARLLNAT 132

Query: 353 LVIPEITSCTSSKGIS 400
           LV+PEI S TSSKGIS
Sbjct: 133 LVVPEIQSTTSSKGIS 148


>emb|CBI16922.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 62/136 (45%), Positives = 72/136 (52%), Gaps = 22/136 (16%)
 Frame = +2

Query: 59  MKWAALVGLSLSAVFLCAHFPLFD-TGESIALHQTSIT--GW--------------LYRR 187
           MKW  LVGL LSA  +  H  L   T + I+ +Q+S+T   W              L+R+
Sbjct: 13  MKWVGLVGLVLSAFSIFIHLLLARYTEDGISDYQSSVTIFSWRPIFENADLPRTSPLHRK 72

Query: 188 FCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDAGLLNAI 352
           F  P R      P A   G Y A  LQ N YIFVRIQ   HE+ N I D  V + LLNA 
Sbjct: 73  FWGPVRRFEPLNPDANPRGYYAAPPLQTNGYIFVRIQGGFHEIRNSISDVVVVSRLLNAT 132

Query: 353 LVIPEITSCTSSKGIS 400
           LVIPEI S TSSKGIS
Sbjct: 133 LVIPEIQSTTSSKGIS 148


>ref|XP_002281879.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera]
          Length = 681

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 62/136 (45%), Positives = 72/136 (52%), Gaps = 22/136 (16%)
 Frame = +2

Query: 59  MKWAALVGLSLSAVFLCAHFPLFD-TGESIALHQTSIT--GW--------------LYRR 187
           MKW  LVGL LSA  +  H  L   T + I+ +Q+S+T   W              L+R+
Sbjct: 13  MKWVGLVGLVLSAFSIFIHLLLARYTEDGISDYQSSVTIFSWRPIFENADLPRTSPLHRK 72

Query: 188 FCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDAGLLNAI 352
           F  P R      P A   G Y A  LQ N YIFVRIQ   HE+ N I D  V + LLNA 
Sbjct: 73  FWGPVRRFEPLNPDANPRGYYAAPPLQTNGYIFVRIQGGFHEIRNSISDVVVVSRLLNAT 132

Query: 353 LVIPEITSCTSSKGIS 400
           LVIPEI S TSSKGIS
Sbjct: 133 LVIPEIQSTTSSKGIS 148


>ref|XP_002331262.1| predicted protein [Populus trichocarpa] gi|222873687|gb|EEF10818.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 60/136 (44%), Positives = 69/136 (50%), Gaps = 22/136 (16%)
 Frame = +2

Query: 59  MKWAALVGLSLSAVFLCAHFPLFD-TGESIALHQTSIT--GWL--------------YRR 187
           MKW  LVGL LSA  L  HF L   T E I  +Q+S+T   W               YRR
Sbjct: 13  MKWVGLVGLVLSAFSLFVHFLLARFTEEGITDYQSSVTIFSWRPVFENPDFAKNSPSYRR 72

Query: 188 FCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDAGLLNAI 352
              P R      P A   G Y     +++ Y+FVRIQ   HE+ N ICD  V + LLNA 
Sbjct: 73  LWGPVRRLESLHPDANPRGYYTDPRSESSGYVFVRIQGGFHEIRNSICDVVVISRLLNAT 132

Query: 353 LVIPEITSCTSSKGIS 400
           LVIPEI S T SKGIS
Sbjct: 133 LVIPEIQSTTRSKGIS 148


>ref|XP_002330934.1| predicted protein [Populus trichocarpa] gi|222873128|gb|EEF10259.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 60/136 (44%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
 Frame = +2

Query: 59  MKWAALVGLSLSAVFLCAHFPLFD-TGESIALHQTSIT--GW--------------LYRR 187
           MKW  LVGL LSA  L  HF L   T E I+ +Q+S+T   W              LYRR
Sbjct: 13  MKWVGLVGLVLSAFSLFVHFLLARYTEEGISDYQSSVTIFSWRPIFENSDFAKNSPLYRR 72

Query: 188 FCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDAGLLNAI 352
                R      P A   G Y     +++ Y+FVRIQ   HE+ N ICD    + LLNA 
Sbjct: 73  LWGQVRRLESLHPDANPRGYYADPRSESSGYVFVRIQGGFHEIRNSICDVVAISRLLNAT 132

Query: 353 LVIPEITSCTSSKGIS 400
           LVIPEI S TSSKGIS
Sbjct: 133 LVIPEIQSTTSSKGIS 148


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