BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020405
         (1537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274146.1| PREDICTED: 28S ribosomal protein S9, mitocho...   354   4e-95
ref|XP_002513668.1| ribosomal protein S9, putative [Ricinus comm...   351   3e-94
ref|XP_004145895.1| PREDICTED: 28S ribosomal protein S9, mitocho...   335   1e-89
ref|XP_003559860.1| PREDICTED: uncharacterized protein LOC100828...   333   6e-89
dbj|BAC81158.1| putative 30S ribosomal protein S9 [Oryza sativa ...   330   6e-88

>ref|XP_002274146.1| PREDICTED: 28S ribosomal protein S9, mitochondrial [Vitis vinifera]
            gi|147846771|emb|CAN80622.1| hypothetical protein
            VITISV_043432 [Vitis vinifera]
            gi|296084909|emb|CBI28318.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  354 bits (908), Expect = 4e-95
 Identities = 169/204 (82%), Positives = 188/204 (92%)
 Frame = +3

Query: 516  GPNRAFGDLIAAAGITDAMLDSLIALKDLEGVEGLSPLSEIEATNSEKSQKSYTRAEIER 695
            GPNRAFGDLIAA+GITDAMLDSLIALKDLEGVEGL PLSEIE    EK+ +  TRAEIER
Sbjct: 154  GPNRAFGDLIAASGITDAMLDSLIALKDLEGVEGLPPLSEIEDIRYEKNTRKSTRAEIER 213

Query: 696  QKQEEIDKSRVRRVDEKGRAYGTGRRKCSVARVWIEPGEGKFIVNDKQFDVYFPIIDHRA 875
            QKQEE+ K+RVR+VDEKGRAYGTGRRKCS+ARVW++PG+GKF++NDKQFDVYFP++DHRA
Sbjct: 214  QKQEEVAKARVRQVDEKGRAYGTGRRKCSIARVWVQPGDGKFMINDKQFDVYFPMLDHRA 273

Query: 876  DLLRPFCETKTLGLWDVKCTVKGGGVSGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTR 1055
             LLRPF ETKTLGLWDV CTVKGGG+SGQVGA+RLGISRALQNWEPGLR  L+  GFLTR
Sbjct: 274  ALLRPFSETKTLGLWDVNCTVKGGGLSGQVGAIRLGISRALQNWEPGLRPQLREAGFLTR 333

Query: 1056 DPRMVERKKPGKAKARKSFQWVKR 1127
            DPR+VERKKPGKAKARKS+QWVKR
Sbjct: 334  DPRVVERKKPGKAKARKSYQWVKR 357


>ref|XP_002513668.1| ribosomal protein S9, putative [Ricinus communis]
            gi|223547576|gb|EEF49071.1| ribosomal protein S9,
            putative [Ricinus communis]
          Length = 398

 Score =  351 bits (900), Expect = 3e-94
 Identities = 187/305 (61%), Positives = 215/305 (70%), Gaps = 7/305 (2%)
 Frame = +3

Query: 234  ESWNTNETKG-----DVFGDIDKXXXXXXXXXXXX-AQEMKGWSIGD-DDKVNDIFNXXX 392
            ESW   E  G     D+F  I+K             ++E K W++ D +D+ + +F+   
Sbjct: 95   ESWLEEEEGGSNDSKDIFQGIEKESAGGEDNNEWLQSEEYKMWNLDDAEDQKDHVFDIEE 154

Query: 393  XXXXXXXXXXLSSEVEDNRNAKNEVXXXXXXXXXXXXXXXXGPNRAFGDLIAAAGITDAM 572
                        S     +  K E                 G NRAFGDLIAA+GITDAM
Sbjct: 155  INADTSSEFTTESSANVEKE-KTEEQKMLEAEEKELTAVLKGSNRAFGDLIAASGITDAM 213

Query: 573  LDSLIALKDLEGVEGLSPLSEIEATNSEKSQKSYTRAEIERQKQEEIDKSRVRRVDEKGR 752
            LDSLIAL+D EGVEGL PLSEIE    EK+ +  TRA+IERQKQEE+ KSRVR+VDEKGR
Sbjct: 214  LDSLIALRDFEGVEGLPPLSEIEDMRYEKNTRKSTRADIERQKQEEVAKSRVRQVDEKGR 273

Query: 753  AYGTGRRKCSVARVWIEPGEGKFIVNDKQFDVYFPIIDHRADLLRPFCETKTLGLWDVKC 932
            AYGTGRRKCSVARVWIEPG+GKFIVNDKQFDVYFP++DHRA LLRPF ETKTLGLWDVKC
Sbjct: 274  AYGTGRRKCSVARVWIEPGDGKFIVNDKQFDVYFPMLDHRAALLRPFSETKTLGLWDVKC 333

Query: 933  TVKGGGVSGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTRDPRMVERKKPGKAKARKSF 1112
            TVKGGG +GQVGA++LGISRA+QNWEP LR  L+  GFLTRDPR+VERKKPGKAKARKSF
Sbjct: 334  TVKGGGTTGQVGAIQLGISRAMQNWEPDLRPPLRNAGFLTRDPRVVERKKPGKAKARKSF 393

Query: 1113 QWVKR 1127
            QWVKR
Sbjct: 394  QWVKR 398


>ref|XP_004145895.1| PREDICTED: 28S ribosomal protein S9, mitochondrial-like [Cucumis
            sativus]
          Length = 405

 Score =  335 bits (860), Expect = 1e-89
 Identities = 177/312 (56%), Positives = 216/312 (69%), Gaps = 14/312 (4%)
 Frame = +3

Query: 234  ESWNTNET-----KGDVFGDIDKXXXXXXXXXXXXAQEMKG----WSIGDDDKVNDIFNX 386
            +SW T+++     +GD+F  ++K               M+     WS+ +++K +D+FN 
Sbjct: 95   DSWVTSKSGDQDAEGDLFASLEKEVQGNKDGVSHDEWPMEKKFDVWSLVEEEK-SDVFNI 153

Query: 387  XXXXXXXXXXXXLSSEV-----EDNRNAKNEVXXXXXXXXXXXXXXXXGPNRAFGDLIAA 551
                           EV     ED R  + E                 GPNRAFGDLIAA
Sbjct: 154  EEGEVKIGEFGDGLKEVDTESSEDARKLEKENAMKLEKEEQELTAVLKGPNRAFGDLIAA 213

Query: 552  AGITDAMLDSLIALKDLEGVEGLSPLSEIEATNSEKSQKSYTRAEIERQKQEEIDKSRVR 731
            +G TD M+DSL+ALKDLEG+EGL PL+EIE    EK+ +  +RAEIERQKQEE+ K+RVR
Sbjct: 214  SGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNTRKSSRAEIERQKQEEVAKARVR 273

Query: 732  RVDEKGRAYGTGRRKCSVARVWIEPGEGKFIVNDKQFDVYFPIIDHRADLLRPFCETKTL 911
            +VD KGRAYGTGRRKCS+ARVWI+PG GKF+VNDK+FDVYFP++D RA LL+PF ETKTL
Sbjct: 274  QVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFDVYFPMLDSRAILLQPFAETKTL 333

Query: 912  GLWDVKCTVKGGGVSGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTRDPRMVERKKPGK 1091
            GLWDV CTVKGGG +GQVGA++LGISRALQNWEP  R  L+A GFLTRD R+VERKKPGK
Sbjct: 334  GLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRPPLRASGFLTRDARVVERKKPGK 393

Query: 1092 AKARKSFQWVKR 1127
            AKARKSFQWVKR
Sbjct: 394  AKARKSFQWVKR 405


>ref|XP_003559860.1| PREDICTED: uncharacterized protein LOC100828544 [Brachypodium
            distachyon]
          Length = 412

 Score =  333 bits (855), Expect = 6e-89
 Identities = 162/204 (79%), Positives = 182/204 (89%)
 Frame = +3

Query: 516  GPNRAFGDLIAAAGITDAMLDSLIALKDLEGVEGLSPLSEIEATNSEKSQKSYTRAEIER 695
            GP+RAFGDLI+A+GIT+ M+DSLI LKD  G+ GL PLSEI+    +K   + +RAE+ER
Sbjct: 209  GPDRAFGDLISASGITEDMIDSLILLKDARGIPGLPPLSEIQDRAIQKMNATSSRAEVER 268

Query: 696  QKQEEIDKSRVRRVDEKGRAYGTGRRKCSVARVWIEPGEGKFIVNDKQFDVYFPIIDHRA 875
            QKQEEI K+RVR+VDEKGRAYGTG+RKCS+ARVWI+PG+GKFIVNDKQFDVYFPI+DHRA
Sbjct: 269  QKQEEIAKARVRQVDEKGRAYGTGKRKCSIARVWIQPGDGKFIVNDKQFDVYFPILDHRA 328

Query: 876  DLLRPFCETKTLGLWDVKCTVKGGGVSGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTR 1055
            DLLRPF  TKTLGLWDV CTVKGGGVSGQVGAVRLGISRALQNWEPGLR  LKA G+LTR
Sbjct: 329  DLLRPFNVTKTLGLWDVACTVKGGGVSGQVGAVRLGISRALQNWEPGLRPYLKAAGYLTR 388

Query: 1056 DPRMVERKKPGKAKARKSFQWVKR 1127
            D R+VERKKPGKAKARKSFQWVKR
Sbjct: 389  DSRVVERKKPGKAKARKSFQWVKR 412


>dbj|BAC81158.1| putative 30S ribosomal protein S9 [Oryza sativa Japonica Group]
            gi|50510138|dbj|BAD31103.1| putative 30S ribosomal
            protein S9 [Oryza sativa Japonica Group]
          Length = 341

 Score =  330 bits (846), Expect = 6e-88
 Identities = 160/204 (78%), Positives = 179/204 (87%)
 Frame = +3

Query: 516  GPNRAFGDLIAAAGITDAMLDSLIALKDLEGVEGLSPLSEIEATNSEKSQKSYTRAEIER 695
            GPNRAFGDLI A+GIT+ M+ SLI LKD+ GV GL PL EIE    EK   + +RA++ER
Sbjct: 138  GPNRAFGDLIEASGITEDMIASLILLKDVRGVPGLPPLREIEDETIEKMNATSSRADVER 197

Query: 696  QKQEEIDKSRVRRVDEKGRAYGTGRRKCSVARVWIEPGEGKFIVNDKQFDVYFPIIDHRA 875
            QKQEEI K+RVR+VDEKGRAYGTG+RKCS+ARVWI+PG+GKFIVNDKQFD YFPI+DHRA
Sbjct: 198  QKQEEIAKARVRQVDEKGRAYGTGKRKCSIARVWIQPGDGKFIVNDKQFDSYFPILDHRA 257

Query: 876  DLLRPFCETKTLGLWDVKCTVKGGGVSGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTR 1055
            DLLRPF  TKTLG WDV CTVKGGGVSGQVGA+RLGISRALQNWEPGLR +LKA G+LTR
Sbjct: 258  DLLRPFTVTKTLGRWDVTCTVKGGGVSGQVGAIRLGISRALQNWEPGLRPNLKAAGYLTR 317

Query: 1056 DPRMVERKKPGKAKARKSFQWVKR 1127
            D R+VERKKPGKAKARKSFQWVKR
Sbjct: 318  DSRVVERKKPGKAKARKSFQWVKR 341