BLASTX nr result

ID: Coptis25_contig00020393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020393
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   268   2e-69
ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   243   6e-62
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   236   6e-60
emb|CBI32505.3| unnamed protein product [Vitis vinifera]              232   1e-58
gb|ABR16110.1| unknown [Picea sitchensis]                             146   8e-33

>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  268 bits (685), Expect = 2e-69
 Identities = 131/230 (56%), Positives = 168/230 (73%)
 Frame = -2

Query: 850 RPRYCGTVDGKIPLLPLKGLHDQIDSVHAKQPPTRTPSEKMKALKAVVIWDNFFTGCEHS 671
           RPRYC  +     L+ + GL++Q+   HA +P  RT SEK +AL AV+IWDN+F  CEH+
Sbjct: 311 RPRYCKQLTYSPTLVSVNGLNEQL---HANEPLVRTASEKKRALSAVMIWDNYFKACEHT 367

Query: 670 GKKLLRDGAIGALDMEAWQNSKNKIAEIGLPAYTFLQCFLYSIKSCSPGFLMGGNVELTN 491
           GK+LLR GA+G  D+E W+NSKNKI  IG+PAY+FL+CFL+SIKS SPGFLM  NVELT+
Sbjct: 368 GKELLRAGAVGMPDLETWRNSKNKIINIGIPAYSFLECFLHSIKSGSPGFLMRDNVELTS 427

Query: 490 VNRPEGRIFDWLFEPMSIMKEQIRSXXXXXXXXXXXXXXXLSCGDAQRLEAWENGGVPPY 311
           +NRPEGR+FDW+FEPMSIMKEQ++                L  GD +R+EAW+NGG PP 
Sbjct: 428 LNRPEGRVFDWMFEPMSIMKEQLKRLNLVETEELYLYKFSLYHGDRERMEAWQNGGFPPE 487

Query: 310 NDIRRAQLEGISRRLHGFCVTVSRLPTFRRRFCEVINVLLREAKHQSSGY 161
           ++IRRAQLEGISRRL GFC+T+SRLPT RR F  V+  + +EA+    G+
Sbjct: 488 DEIRRAQLEGISRRLQGFCLTLSRLPTSRRWFDGVVKEIEQEARRGLDGF 537


>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
            gi|223538447|gb|EEF40053.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 550

 Score =  243 bits (620), Expect = 6e-62
 Identities = 120/237 (50%), Positives = 161/237 (67%)
 Frame = -2

Query: 850  RPRYCGTVDGKIPLLPLKGLHDQIDSVHAKQPPTRTPSEKMKALKAVVIWDNFFTGCEHS 671
            RP+Y   V     LLP+  L +Q+DS +  +P  R P++K   LK  VIWD+FF   E  
Sbjct: 311  RPKYRKQVSSTSSLLPVMRLQEQLDSAYVGEPFIRPPTDKANTLKTAVIWDSFFKAFEDI 370

Query: 670  GKKLLRDGAIGALDMEAWQNSKNKIAEIGLPAYTFLQCFLYSIKSCSPGFLMGGNVELTN 491
            GK+LL + AIG  D++AW+NSK+ I   G+PAY FL+CFL+SIKS S GF++  +VE+T+
Sbjct: 371  GKELLSNEAIGLSDLDAWRNSKSNIINTGIPAYAFLECFLHSIKSSSSGFILRDDVEITS 430

Query: 490  VNRPEGRIFDWLFEPMSIMKEQIRSXXXXXXXXXXXXXXXLSCGDAQRLEAWENGGVPPY 311
            VNRPEGR+FDWL+EPM IMKEQI+S               L  GDA R+E+W N G+PP 
Sbjct: 431  VNRPEGRVFDWLYEPMCIMKEQIKSLSLNKTEELYFYKHCLYGGDAARIESWLNDGIPPD 490

Query: 310  NDIRRAQLEGISRRLHGFCVTVSRLPTFRRRFCEVINVLLREAKHQSSGYGSDSEIE 140
            + IRRAQLEG+SRRL GFC+T+SRLPT RRRF EV+  + ++AK  ++    D ++E
Sbjct: 491  DKIRRAQLEGLSRRLQGFCLTLSRLPTSRRRFFEVVKAIEQDAKESNTLGDEDVDLE 547


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
            predicted protein [Populus trichocarpa]
          Length = 548

 Score =  236 bits (603), Expect = 6e-60
 Identities = 119/233 (51%), Positives = 155/233 (66%)
 Frame = -2

Query: 850  RPRYCGTVDGKIPLLPLKGLHDQIDSVHAKQPPTRTPSEKMKALKAVVIWDNFFTGCEHS 671
            RPRY         LLP+KGLH++ ++ +  +    T ++K  +LKA +IWD+FF   E  
Sbjct: 310  RPRYRKGATSSSSLLPVKGLHERFEAAYVGEQLVTTTTDKATSLKAAMIWDSFFKTFEDI 369

Query: 670  GKKLLRDGAIGALDMEAWQNSKNKIAEIGLPAYTFLQCFLYSIKSCSPGFLMGGNVELTN 491
            GK+LLR GAIG  D++AW +SK+KI + G+PAY FL+CFL S K  S G ++   VE+T 
Sbjct: 370  GKELLRMGAIGMPDLDAWADSKSKIIDNGIPAYAFLECFLRSFKHGSYGLILRDKVEITR 429

Query: 490  VNRPEGRIFDWLFEPMSIMKEQIRSXXXXXXXXXXXXXXXLSCGDAQRLEAWENGGVPPY 311
            +NRPEGRIFDWL+EPM IMKEQI S               L  GD  R++ W NGG PP 
Sbjct: 430  LNRPEGRIFDWLYEPMCIMKEQISSLKLDESEELYFYKHCLYGGDENRIKTWLNGGTPPS 489

Query: 310  NDIRRAQLEGISRRLHGFCVTVSRLPTFRRRFCEVINVLLREAKHQSSGYGSD 152
            ++I+RAQLEGISRRL GFC+T+SRLPT RRRFCEV+  + +EAK+ S   G D
Sbjct: 490  DEIKRAQLEGISRRLQGFCLTLSRLPTSRRRFCEVVKAIEQEAKNSSILAGGD 542


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  232 bits (592), Expect = 1e-58
 Identities = 110/182 (60%), Positives = 138/182 (75%)
 Frame = -2

Query: 706 IWDNFFTGCEHSGKKLLRDGAIGALDMEAWQNSKNKIAEIGLPAYTFLQCFLYSIKSCSP 527
           IWDN+F  CEH+GK+LLR GA+G  D+E W+NSKNKI  IG+PAY+FL+CFL+SIKS SP
Sbjct: 319 IWDNYFKACEHTGKELLRAGAVGMPDLETWRNSKNKIINIGIPAYSFLECFLHSIKSGSP 378

Query: 526 GFLMGGNVELTNVNRPEGRIFDWLFEPMSIMKEQIRSXXXXXXXXXXXXXXXLSCGDAQR 347
           GFLM  NVELT++NRPEGR+FDW+FEPMSIMKEQ++                L  GD +R
Sbjct: 379 GFLMRDNVELTSLNRPEGRVFDWMFEPMSIMKEQLKRLNLVETEELYLYKFSLYHGDRER 438

Query: 346 LEAWENGGVPPYNDIRRAQLEGISRRLHGFCVTVSRLPTFRRRFCEVINVLLREAKHQSS 167
           +EAW+NGG PP ++IRRAQLEGISRRL GFC+T+SRLPT RR F  V+  + +EA+    
Sbjct: 439 MEAWQNGGFPPEDEIRRAQLEGISRRLQGFCLTLSRLPTSRRWFDGVVKEIEQEARRGLD 498

Query: 166 GY 161
           G+
Sbjct: 499 GF 500


>gb|ABR16110.1| unknown [Picea sitchensis]
          Length = 605

 Score =  146 bits (369), Expect = 8e-33
 Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
 Frame = -2

Query: 754 PTRTPSEK--MKALKAVVIWDNFFTGCEHSGKKLLRDGAIGALDMEAWQNS-KNKIAEIG 584
           P R+ S K  ++ +K + +WD+ F   E  G+ L+ D  I   D+E W ++ K KI  +G
Sbjct: 351 PQRSKSLKKSIQEMKTMQMWDHLFESYERYGRNLVGDNIIKLSDIEEWNHTAKCKILSVG 410

Query: 583 LPAYTFLQCFLYSIKSCSPGFLMGGNVELTNVNRPEGRIFDWLFEPMSIMKEQIRSXXXX 404
           LPAY+ LQ  L S K  S GF      E+T +NR   R+F+W FEP+ I+KEQI++    
Sbjct: 411 LPAYSILQNLLCSAKHDSAGFRFTDGTEITAMNRTGDRLFEWFFEPLMIIKEQIKAEQLE 470

Query: 403 XXXXXXXXXXXLSCGDAQRLEAWENGGVPPYNDIRRAQLEGISRRLHGFCVTVSRLPTFR 224
                      L  G   R++AW+NGG+PP +D+RRA+LE +SRRL G   ++S +PTFR
Sbjct: 471 ESEELYLSKLVLLSGFPDRMKAWQNGGIPPPDDVRRAELEALSRRLQGIAASISIMPTFR 530

Query: 223 RRFCEVINVL 194
           RRF  V+  L
Sbjct: 531 RRFQNVVRNL 540


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