BLASTX nr result

ID: Coptis25_contig00020391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020391
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]   102   2e-20
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]   100   2e-19
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]   100   2e-19
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]    99   5e-19
emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]    99   5e-19

>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
          Length = 1496

 Score =  102 bits (255), Expect = 2e-20
 Identities = 75/167 (44%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
 Frame = +2

Query: 5    MVVRNLDLDKNPFRL--KEEQ*GSSWS*NYST*VILKHLCI*HNMCTRSYIAFSISFLSR 178
            MVVR+LD+ K+PFR   K+E+         S    L +L      CTR  IAFS++ L+R
Sbjct: 1228 MVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLA----NCTRPDIAFSVNLLAR 1283

Query: 179  YNCAHTLRHWNDV*HILRYFYELTCMKLFYSYGSTNDYDLVGYAVFGYLSDPQKGHSQTG 358
            Y+ A T RHWN + HILRY    T M LFYS  S     L+GYA  GYLSDP KG SQTG
Sbjct: 1284 YSSAPTRRHWNGIKHILRYLRGTTDMSLFYSRESKQ--QLLGYADAGYLSDPHKGRSQTG 1341

Query: 359  MYF---------LVVMLPFVGIALNKL*WQLPLTTEILALHEASREC 472
              F           V    V  + N L        EILA+HEASREC
Sbjct: 1342 YVFNCNGTAISWRSVKQTMVATSSNHL--------EILAIHEASREC 1380


>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
          Length = 1501

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 75/168 (44%), Positives = 88/168 (52%), Gaps = 12/168 (7%)
 Frame = +2

Query: 5    MVVRNLDLDKNPFR---LKEEQ*GSSWS*NYST*VILKHLCI*HNMCTRSYIAFSISFLS 175
            MVVR+LD+ K+PFR     EE  G       S    L +L      CTR  IAFS++ L+
Sbjct: 1233 MVVRSLDVKKDPFRPCEXDEELLGPEVP-YLSAIGALMYLA----NCTRPDIAFSVNLLA 1287

Query: 176  RYNCAHTLRHWNDV*HILRYFYELTCMKLFYSYGSTNDYDLVGYAVFGYLSDPQKGHSQT 355
            RY+ A T RHWN + HILRY    T M LFYS  S     L+GYA  GYLSDP KG SQT
Sbjct: 1288 RYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQ--QLLGYADAGYLSDPHKGRSQT 1345

Query: 356  GMYF---------LVVMLPFVGIALNKL*WQLPLTTEILALHEASREC 472
            G  F           V    V  + N         +EILA+HEASREC
Sbjct: 1346 GYVFNCNGXAISWRSVKQTMVATSSNH--------SEILAIHEASREC 1385


>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
          Length = 1306

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 73/167 (43%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
 Frame = +2

Query: 5    MVVRNLDLDKNPFRL--KEEQ*GSSWS*NYST*VILKHLCI*HNMCTRSYIAFSISFLSR 178
            MVVR+LD+ K+PFR   K+E+         +    L +L      CTR  IAFS++ L+R
Sbjct: 1112 MVVRSLDVKKDPFRPCEKDEELLGPEVPYLNAIGALMYLA----NCTRPDIAFSVNLLAR 1167

Query: 179  YNCAHTLRHWNDV*HILRYFYELTCMKLFYSYGSTNDYDLVGYAVFGYLSDPQKGHSQTG 358
            Y+ A T RHWN + HILRY    T M LFYS  S     L+GYA  GYLSDP KG SQTG
Sbjct: 1168 YSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQ--QLLGYADAGYLSDPHKGRSQTG 1225

Query: 359  MYF---------LVVMLPFVGIALNKL*WQLPLTTEILALHEASREC 472
              F           V    V  + N         +EILA+HEASREC
Sbjct: 1226 YVFNCNGTAISWRSVKQTMVATSSNH--------SEILAIHEASREC 1264


>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
          Length = 1360

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 74/167 (44%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
 Frame = +2

Query: 5    MVVRNLDLDKNPFRL--KEEQ*GSSWS*NYST*VILKHLCI*HNMCTRSYIAFSISFLSR 178
            MVVR+LD+ K+PFR   K+E+         S    L +L      CTR  IAFS++ L+R
Sbjct: 1092 MVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLA----NCTRPDIAFSVNLLAR 1147

Query: 179  YNCAHTLRHWNDV*HILRYFYELTCMKLFYSYGSTNDYDLVGYAVFGYLSDPQKGHSQTG 358
            Y+ A T RHWN + HILRY    T M LFYS  S     L+GYA  GYLSDP KG SQ G
Sbjct: 1148 YSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQ--QLLGYADAGYLSDPHKGRSQIG 1205

Query: 359  MYFLVVMLPFVGIALNKL*WQLPLTT---------EILALHEASREC 472
              F        G A++   W+    T         EILA+HEASREC
Sbjct: 1206 YVF-----NCNGTAIS---WRSVKQTMIATSSNHSEILAIHEASREC 1244


>emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]
          Length = 805

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 73/167 (43%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
 Frame = +2

Query: 5   MVVRNLDLDKNPFRL--KEEQ*GSSWS*NYST*VILKHLCI*HNMCTRSYIAFSISFLSR 178
           +VVR+LD+ K+PFR   K+E+         S    L +L      CTRS IAFS++ L+R
Sbjct: 537 IVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAISALMYLA----NCTRSDIAFSVNLLAR 592

Query: 179 YNCAHTLRHWNDV*HILRYFYELTCMKLFYSYGSTNDYDLVGYAVFGYLSDPQKGHSQTG 358
           Y+ A T RHWN + HILRY    T M LFYS  S     L+ YA  GYLSDP KG SQTG
Sbjct: 593 YSSAPTRRHWNGIKHILRYLRGTTDMGLFYSKESKQ--QLLRYADAGYLSDPHKGRSQTG 650

Query: 359 MYF---------LVVMLPFVGIALNKL*WQLPLTTEILALHEASREC 472
             F           V    V  + N         +EILA+HEASREC
Sbjct: 651 YVFNCNGTAISWRSVKQTMVATSSNH--------SEILAIHEASREC 689


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