BLASTX nr result

ID: Coptis25_contig00020387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020387
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273940.1| PREDICTED: uncharacterized protein LOC100255...   205   2e-50
ref|XP_002303737.1| predicted protein [Populus trichocarpa] gi|2...   202   1e-49
ref|XP_002299363.1| predicted protein [Populus trichocarpa] gi|2...   197   4e-48
ref|XP_002512700.1| conserved hypothetical protein [Ricinus comm...   197   6e-48
ref|XP_003577507.1| PREDICTED: uncharacterized protein LOC100827...   126   1e-26

>ref|XP_002273940.1| PREDICTED: uncharacterized protein LOC100255664 [Vitis vinifera]
          Length = 272

 Score =  205 bits (521), Expect = 2e-50
 Identities = 115/229 (50%), Positives = 145/229 (63%), Gaps = 3/229 (1%)
 Frame = +3

Query: 195 KFLNLQTIIPAYWCLGN-LACLHQADRELIRVRPRRVVKLIKWDGVVNIYHQPINASELM 371
           KFLNLQTI   +  + N ++C+H              +KLIK DG+V IY +PI+ SELM
Sbjct: 4   KFLNLQTIPWCFHLMSNPVSCMHLQPEA---PEGSGTIKLIKSDGIVKIYDRPIHVSELM 60

Query: 372 LQFPKHLVCHSHSFYIGQKIPPLSPNDKLQLGHSYFLLPVHFFESVLSFVTIASSFNIKQ 551
           L+FPKH VCHS SFYIGQKIP LS +D+LQLGH YFLLP HFF+SVLSFVT+AS  + + 
Sbjct: 61  LEFPKHRVCHSDSFYIGQKIPALSEDDELQLGHKYFLLPKHFFQSVLSFVTVASFASSQS 120

Query: 552 LVXXXXXXXXXXGNKQAV--AIANCQPFDIKKTPSGSLQIRVSDEFLSKLLEQRRQPAEG 725
                        +K A     A+CQPFDI+KTPSG L+IRVSDEF+++L+E+ +   E 
Sbjct: 121 HPSPDSSSLMSRDSKNAFLKKAASCQPFDIQKTPSGCLRIRVSDEFIAQLMEEGKIKDED 180

Query: 726 QEEEKDMTMTKXXXXXXXXXXXXXCSTPELQRDYTQLVSSRSWKPKLDT 872
              E      K             C+TP+LQ+DYTQLV SR WKPKL+T
Sbjct: 181 GAAETSSGKPK----------SRVCTTPQLQKDYTQLVGSRQWKPKLET 219


>ref|XP_002303737.1| predicted protein [Populus trichocarpa] gi|222841169|gb|EEE78716.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  202 bits (514), Expect = 1e-49
 Identities = 125/286 (43%), Positives = 164/286 (57%)
 Frame = +3

Query: 195  KFLNLQTIIPAYWCLGNLACLHQADRELIRVRPRRVVKLIKWDGVVNIYHQPINASELML 374
            +FLNLQ +IP  WC  NL     +  +L    P   +KLIK DG+V IY +P+  SELM+
Sbjct: 4    RFLNLQ-MIP--WCFHNLMGNPTSCLQLQSEPPAGTIKLIKSDGLVKIYDRPVYVSELMV 60

Query: 375  QFPKHLVCHSHSFYIGQKIPPLSPNDKLQLGHSYFLLPVHFFESVLSFVTIASSFNIKQL 554
            +FPKHLVCHS SFYIGQKIP LS ND+LQLGH YFLLP   F+SVLSFVTIA SF    L
Sbjct: 61   EFPKHLVCHSDSFYIGQKIPALSENDQLQLGHKYFLLPKDCFQSVLSFVTIA-SFTSSSL 119

Query: 555  VXXXXXXXXXXGNKQAVAIANCQPFDIKKTPSGSLQIRVSDEFLSKLLEQRRQPAEGQEE 734
                        N      A CQPFDI+K+P+G L+IRVSD+F+S+L+E+ +    G++E
Sbjct: 120  ----QPQPSSSRNAFLKKAATCQPFDIQKSPNGCLRIRVSDDFISQLMEEGKVKESGEDE 175

Query: 735  EKDMTMTKXXXXXXXXXXXXXCSTPELQRDYTQLVSSRSWKPKLDTXXXXXXXXXXXXXX 914
                   K             C+TP+L++DYTQLV SR WKPKL+T              
Sbjct: 176  SSGNCKPK----------SRVCTTPQLEKDYTQLVGSRQWKPKLET-IKENEKRRLSSSF 224

Query: 915  XXXXXXXXQQQITKAGTTTPVVPQLVKAHISEHRHQKSATSKIRIK 1052
                    Q ++T+  T   V  Q + +  + H ++ S  +KI+IK
Sbjct: 225  GMKRRKKSQSKVTQKSTHRSVSEQHLHSTSTSH-NKSSLKAKIKIK 269


>ref|XP_002299363.1| predicted protein [Populus trichocarpa] gi|222846621|gb|EEE84168.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  197 bits (502), Expect = 4e-48
 Identities = 115/228 (50%), Positives = 146/228 (64%), Gaps = 2/228 (0%)
 Frame = +3

Query: 195 KFLNLQTIIPAYWCLGN-LACLHQADRELIRVRPRRVVKLIKWDGVVNIYHQPINASELM 371
           +FLNLQ I   +  +GN ++CL     ++    P   +KLI+ DG+V IY +PI  SELM
Sbjct: 4   RFLNLQIIPWCFHLMGNPISCL-----QIQSEPPAGTIKLIRSDGLVKIYDRPIYVSELM 58

Query: 372 LQFPKHLVCHSHSFYIGQKIPPLSPNDKLQLGHSYFLLPVHFFESVLSFVTIASSFNIKQ 551
           ++FPKHLVCHS SFYIGQKIP LS ND LQLGH YFLLP H F+SVLSFVTIA SF    
Sbjct: 59  VEFPKHLVCHSDSFYIGQKIPALSENDLLQLGHKYFLLPKHCFQSVLSFVTIA-SFASSS 117

Query: 552 LVXXXXXXXXXXGNKQAVAIANCQPFDIKKTPSGSLQIRVSDEFLSKLLEQRR-QPAEGQ 728
           L            N      A CQPFDI K+P+G L+IRVSDEFLS+L+E+ + + +E  
Sbjct: 118 L----QPQPSSSRNAFLKKAATCQPFDILKSPNGCLRIRVSDEFLSQLMEEGKVKESEED 173

Query: 729 EEEKDMTMTKXXXXXXXXXXXXXCSTPELQRDYTQLVSSRSWKPKLDT 872
           E  ++ T T              C+TP+L++DYTQLV SR WKPKL++
Sbjct: 174 ESSRNCTPTS-----------RVCTTPQLEKDYTQLVGSRQWKPKLES 210


>ref|XP_002512700.1| conserved hypothetical protein [Ricinus communis]
           gi|223548661|gb|EEF50152.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  197 bits (500), Expect = 6e-48
 Identities = 118/233 (50%), Positives = 146/233 (62%), Gaps = 6/233 (2%)
 Frame = +3

Query: 192 RKFLNLQTIIPAYWCL----GNLACLHQADRELIRVRPRRVVKLIKWDGVVNIYHQPINA 359
           RKF+NLQ +IP  WCL     +++C+H          P   VKLIK DG+V IY +PI+ 
Sbjct: 3   RKFMNLQ-MIP--WCLQLMGNHISCVHIRPEP-----PAGTVKLIKSDGLVKIYDRPIHV 54

Query: 360 SELMLQFPKHLVCHSHSFYIGQKIPPLSPNDKLQLGHSYFLLPVHFFESVLSFVTIAS-- 533
           SEL+ ++PKHLVC S SFYIGQKIP LS ND+LQLGH YFLLP H F+SVLSFVTIAS  
Sbjct: 55  SELLHEYPKHLVCRSDSFYIGQKIPALSENDQLQLGHKYFLLPKHCFQSVLSFVTIASFV 114

Query: 534 SFNIKQLVXXXXXXXXXXGNKQAVAIANCQPFDIKKTPSGSLQIRVSDEFLSKLLEQRRQ 713
           + +  QL            N      A C+ FDI+K+PSG L+IRVSDEF+S+LLE    
Sbjct: 115 TTSQPQLPHSSTSTPRDSTNALLKKAATCRAFDIQKSPSGCLRIRVSDEFISQLLE---- 170

Query: 714 PAEGQEEEKDMTMTKXXXXXXXXXXXXXCSTPELQRDYTQLVSSRSWKPKLDT 872
             EG+ EE D  +T              C+TP+LQ+DY  LV SR WKPKL+T
Sbjct: 171 --EGKMEEDDRKITS-----------RVCTTPQLQKDYGLLVRSRQWKPKLET 210


>ref|XP_003577507.1| PREDICTED: uncharacterized protein LOC100827820 [Brachypodium
           distachyon]
          Length = 291

 Score =  126 bits (317), Expect = 1e-26
 Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 3/207 (1%)
 Frame = +3

Query: 261 QADRELIRVRPRRVVKLIKWDGVVNIYHQPINASELMLQFPKHLVCHSHSFYIGQKIPPL 440
           Q D+E   ++ +  V+L+  DG V  Y +P+ A ELM Q P HLVC S +  IG+KIP +
Sbjct: 41  QEDKE---IKLQEAVRLVGCDGRVLTYRRPVTARELMQQHPCHLVCRSDALLIGEKIPAV 97

Query: 441 SPNDKLQLGHSYFLLPVHFFESVLSFVTIASSFNIKQLVXXXXXXXXXXGNKQAVAIANC 620
           SP ++LQ GH+YFLLP H F SVLSFV++ASS     L+           N +       
Sbjct: 98  SPGEELQPGHAYFLLPAHLFHSVLSFVSLASSL----LLLLSTAGGNDNSNSKKKKPQQQ 153

Query: 621 QPFDIKKTPSGSLQIRVSDEFLSKLLEQRRQPAEGQEEEKDMTMTKXXXXXXXXXXXXXC 800
           +PF++ +T SG+LQI+ SD+FL  L+          + E D    K             C
Sbjct: 154 RPFELLRTDSGTLQIKFSDDFL--LVNDNDDSKNSDDSEGDAKEKK---------PAVLC 202

Query: 801 STPELQRDYTQLV---SSRSWKPKLDT 872
              +L+++Y +LV    +R W PKL+T
Sbjct: 203 GDEKLEKEYEELVGYGKARRWAPKLET 229


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