BLASTX nr result

ID: Coptis25_contig00020386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020386
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533679.1| PREDICTED: cellulose synthase A catalytic su...   163   1e-38
emb|CBI37171.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic su...   160   1e-37
gb|ACJ38666.1| cellulose synthase [Betula luminifera]                 153   1e-35
gb|ACC59197.1| cellulose synthase [Betula platyphylla]                153   1e-35

>ref|XP_003533679.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Glycine max]
          Length = 1050

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/148 (54%), Positives = 102/148 (68%)
 Frame = +2

Query: 2   YKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKGDVTNNNIDINRSENGDYHPQQWHPNG 181
           YKRHKGCPRV                  +K+H+ D+  N+ D+N  ENGDY+P++ HPNG
Sbjct: 87  YKRHKGCPRVAGDEEDNFDADDFDDEFPVKNHREDLDRNH-DVNHVENGDYNPEKLHPNG 145

Query: 182 PAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKWKAKQEKKGLMSKXXXXXXXXXXXXXF 361
            AFSS AGS+ GKDFEG+K+ Y+N EW+ERV+KWK +QEK+GL++K             +
Sbjct: 146 QAFSS-AGSVAGKDFEGDKEFYSNAEWQERVEKWKVRQEKRGLLNK-EDGKEDQGEEDDY 203

Query: 362 LMAEARQPLWRKIPIPSSKINPYRIVIV 445
           L+AEARQPLWRK+PI SS INPYRIVIV
Sbjct: 204 LLAEARQPLWRKVPISSSLINPYRIVIV 231


>emb|CBI37171.3| unnamed protein product [Vitis vinifera]
          Length = 1000

 Score =  160 bits (405), Expect = 1e-37
 Identities = 85/148 (57%), Positives = 99/148 (66%)
 Frame = +2

Query: 2   YKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKGDVTNNNIDINRSENGDYHPQQWHPNG 181
           YKRHKGC RV                 QIK+ +      N+    SENGDY+PQQWH NG
Sbjct: 82  YKRHKGCARVAGDDEGSLDGDDFNDEFQIKNTRDQ---QNV-FAPSENGDYNPQQWHANG 137

Query: 182 PAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKWKAKQEKKGLMSKXXXXXXXXXXXXXF 361
            AFS+ AGS+ GKDFEGEKD+YNN EWK+RV+KWK +QEKKGL+SK             F
Sbjct: 138 QAFSA-AGSVAGKDFEGEKDIYNNDEWKDRVEKWKTRQEKKGLISK--DGGNDPGDDDDF 194

Query: 362 LMAEARQPLWRKIPIPSSKINPYRIVIV 445
           L+AEARQPLWRK+PI SSKI+PYRIVIV
Sbjct: 195 LLAEARQPLWRKVPIASSKISPYRIVIV 222


>ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Vitis vinifera]
          Length = 1044

 Score =  160 bits (405), Expect = 1e-37
 Identities = 85/148 (57%), Positives = 99/148 (66%)
 Frame = +2

Query: 2   YKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKGDVTNNNIDINRSENGDYHPQQWHPNG 181
           YKRHKGC RV                 QIK+ +      N+    SENGDY+PQQWH NG
Sbjct: 87  YKRHKGCARVAGDDEGSLDGDDFNDEFQIKNTRDQ---QNV-FAPSENGDYNPQQWHANG 142

Query: 182 PAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKWKAKQEKKGLMSKXXXXXXXXXXXXXF 361
            AFS+ AGS+ GKDFEGEKD+YNN EWK+RV+KWK +QEKKGL+SK             F
Sbjct: 143 QAFSA-AGSVAGKDFEGEKDIYNNDEWKDRVEKWKTRQEKKGLISK--DGGNDPGDDDDF 199

Query: 362 LMAEARQPLWRKIPIPSSKINPYRIVIV 445
           L+AEARQPLWRK+PI SSKI+PYRIVIV
Sbjct: 200 LLAEARQPLWRKVPIASSKISPYRIVIV 227


>gb|ACJ38666.1| cellulose synthase [Betula luminifera]
          Length = 1049

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/148 (51%), Positives = 94/148 (63%)
 Frame = +2

Query: 2   YKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKGDVTNNNIDINRSENGDYHPQQWHPNG 181
           YKR KGCPRV                 Q K+H  D    ++ I+ SENGDY+  QW P G
Sbjct: 90  YKRQKGCPRVAGDDDENFDADDFDDEFQTKNHHDDSDRQHVTIH-SENGDYNHPQWKPTG 148

Query: 182 PAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKWKAKQEKKGLMSKXXXXXXXXXXXXXF 361
               S AGS+ GKDFEGE++ Y+N EWKER++KWK +QEK+GL++K             F
Sbjct: 149 ----SFAGSVAGKDFEGEREAYSNAEWKERIEKWKVRQEKRGLVNKDDGNNDQGDDQDDF 204

Query: 362 LMAEARQPLWRKIPIPSSKINPYRIVIV 445
           L+AEARQPLWRK+PI SSKI+PYRIVIV
Sbjct: 205 LLAEARQPLWRKVPISSSKISPYRIVIV 232


>gb|ACC59197.1| cellulose synthase [Betula platyphylla]
          Length = 1048

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/148 (51%), Positives = 94/148 (63%)
 Frame = +2

Query: 2   YKRHKGCPRVPXXXXXXXXXXXXXXXXQIKSHKGDVTNNNIDINRSENGDYHPQQWHPNG 181
           YKR KGCPRV                 Q K+H  D    ++ I+ SENGDY+  QW P G
Sbjct: 90  YKRQKGCPRVAGDDDENFDADDFDDEFQTKNHHDDSDRQHVTIH-SENGDYNHPQWKPTG 148

Query: 182 PAFSSIAGSIVGKDFEGEKDVYNNVEWKERVDKWKAKQEKKGLMSKXXXXXXXXXXXXXF 361
               S AGS+ GKDFEGE++ Y+N EWKER++KWK +QEK+GL++K             F
Sbjct: 149 ----SFAGSVAGKDFEGERETYSNAEWKERIEKWKVRQEKRGLVNKDDGNNDQGDDQDDF 204

Query: 362 LMAEARQPLWRKIPIPSSKINPYRIVIV 445
           L+AEARQPLWRK+PI SSKI+PYRIVIV
Sbjct: 205 LLAEARQPLWRKVPIASSKISPYRIVIV 232


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