BLASTX nr result

ID: Coptis25_contig00020385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020385
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic su...   171   7e-41
gb|ACJ38666.1| cellulose synthase [Betula luminifera]                 169   3e-40
gb|ACC59197.1| cellulose synthase [Betula platyphylla]                167   8e-40
emb|CBI37171.3| unnamed protein product [Vitis vinifera]              161   4e-38
ref|XP_003533679.1| PREDICTED: cellulose synthase A catalytic su...   147   7e-34

>ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Vitis vinifera]
          Length = 1044

 Score =  171 bits (432), Expect = 7e-41
 Identities = 76/97 (78%), Positives = 86/97 (88%)
 Frame = +3

Query: 54  MASNTMTGLVAGSHRRNELHVMQNADEPPPIRQSVSKNCRVCGDEIGLKDNGELFVACYE 233
           MASNTM GLVAGSH RNE+HV+ + ++ PP RQSV K CRVCGDEIG+K +GELFVAC+E
Sbjct: 1   MASNTMAGLVAGSHTRNEMHVL-HGEQRPPTRQSVPKLCRVCGDEIGVKADGELFVACHE 59

Query: 234 CGFPVCRLCYDYERSEGNQCCPQCNTRYKRHKGCPRV 344
           CGFPVC+ CY+YERSEGNQCCPQCNTRYKRHKGC RV
Sbjct: 60  CGFPVCKPCYEYERSEGNQCCPQCNTRYKRHKGCARV 96


>gb|ACJ38666.1| cellulose synthase [Betula luminifera]
          Length = 1049

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/99 (80%), Positives = 84/99 (84%), Gaps = 2/99 (2%)
 Frame = +3

Query: 54  MASNTMTG-LVAGSHRRNELHVMQNADEP-PPIRQSVSKNCRVCGDEIGLKDNGELFVAC 227
           MASN MTG LVAGSH RNELHV+   DE  PP RQSVSK CRVCGDEIG K++GELFVAC
Sbjct: 1   MASNAMTGGLVAGSHTRNELHVLHGDDEQRPPTRQSVSKTCRVCGDEIGYKEDGELFVAC 60

Query: 228 YECGFPVCRLCYDYERSEGNQCCPQCNTRYKRHKGCPRV 344
           + CGFPVCR CYDYERSEGNQ CPQCNTRYKR KGCPRV
Sbjct: 61  HVCGFPVCRPCYDYERSEGNQSCPQCNTRYKRQKGCPRV 99


>gb|ACC59197.1| cellulose synthase [Betula platyphylla]
          Length = 1048

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/99 (80%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
 Frame = +3

Query: 54  MASNTMTG-LVAGSHRRNELHVMQNADEP-PPIRQSVSKNCRVCGDEIGLKDNGELFVAC 227
           MASN MTG LVAGSH RNELHV+   DE  PP RQSVSK CRVCGDEIG K++GELFVAC
Sbjct: 1   MASNAMTGGLVAGSHTRNELHVLHGDDEQRPPTRQSVSKTCRVCGDEIGYKEDGELFVAC 60

Query: 228 YECGFPVCRLCYDYERSEGNQCCPQCNTRYKRHKGCPRV 344
             CGFPVCR CYDYERSEGNQ CPQCNTRYKR KGCPRV
Sbjct: 61  NVCGFPVCRPCYDYERSEGNQSCPQCNTRYKRQKGCPRV 99


>emb|CBI37171.3| unnamed protein product [Vitis vinifera]
          Length = 1000

 Score =  161 bits (408), Expect = 4e-38
 Identities = 71/92 (77%), Positives = 81/92 (88%)
 Frame = +3

Query: 69  MTGLVAGSHRRNELHVMQNADEPPPIRQSVSKNCRVCGDEIGLKDNGELFVACYECGFPV 248
           M GLVAGSH RNE+HV+ + ++ PP RQSV K CRVCGDEIG+K +GELFVAC+ECGFPV
Sbjct: 1   MAGLVAGSHTRNEMHVL-HGEQRPPTRQSVPKLCRVCGDEIGVKADGELFVACHECGFPV 59

Query: 249 CRLCYDYERSEGNQCCPQCNTRYKRHKGCPRV 344
           C+ CY+YERSEGNQCCPQCNTRYKRHKGC RV
Sbjct: 60  CKPCYEYERSEGNQCCPQCNTRYKRHKGCARV 91


>ref|XP_003533679.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Glycine max]
          Length = 1050

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/100 (70%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
 Frame = +3

Query: 54  MASNTMTGLVAGSHRRNELHVMQNADE--PPPIRQSVSKN-CRVCGDEIGLKDNGELFVA 224
           MASN+M GL+ GS+     H  +++DE   PP RQ+ SK  CRVCGDEIG K+NGELFVA
Sbjct: 1   MASNSMAGLITGSNS----HFSRDSDEHQTPPTRQASSKTTCRVCGDEIGYKENGELFVA 56

Query: 225 CYECGFPVCRLCYDYERSEGNQCCPQCNTRYKRHKGCPRV 344
           C+ CGFPVCR CY+YERSEGNQ CPQCNTRYKRHKGCPRV
Sbjct: 57  CHVCGFPVCRPCYEYERSEGNQSCPQCNTRYKRHKGCPRV 96


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