BLASTX nr result

ID: Coptis25_contig00020377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020377
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogen...    77   2e-12
ref|XP_002961441.1| hypothetical protein SELMODRAFT_230009 [Sela...    75   6e-12
ref|XP_002971376.1| hypothetical protein SELMODRAFT_94736 [Selag...    75   6e-12
ref|XP_004154610.1| PREDICTED: succinate-semialdehyde dehydrogen...    74   9e-12
ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogen...    74   9e-12

>ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Cucumis sativus]
          Length = 541

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/76 (59%), Positives = 53/76 (69%)
 Frame = +2

Query: 71  ITPLKSDNQIIFYEI*PVGVVGVITAWNFPLARFTPKVTPALLVVVQRLSIPLNLHTPLT 250
           I+P  +D +++  +  PVGVVG+IT WNFPLA  T KV PAL      +  P  L TPLT
Sbjct: 186 ISPTIADRRLLVLKQ-PVGVVGIITPWNFPLAMITRKVGPALASGCTVVIKPSEL-TPLT 243

Query: 251 ALAAAELSLQAGIPPG 298
           ALAAAELSLQAGIPPG
Sbjct: 244 ALAAAELSLQAGIPPG 259


>ref|XP_002961441.1| hypothetical protein SELMODRAFT_230009 [Selaginella moellendorffii]
           gi|300170100|gb|EFJ36701.1| hypothetical protein
           SELMODRAFT_230009 [Selaginella moellendorffii]
          Length = 499

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/60 (68%), Positives = 43/60 (71%)
 Frame = +2

Query: 119 PVGVVGVITAWNFPLARFTPKVTPALLVVVQRLSIPLNLHTPLTALAAAELSLQAGIPPG 298
           PVGVVG IT WNFPLA  T KV PAL      +  P  L TPLTALAAAELS+QAGIPPG
Sbjct: 160 PVGVVGTITPWNFPLAMITRKVAPALAAGCTVVIKPAEL-TPLTALAAAELSIQAGIPPG 218


>ref|XP_002971376.1| hypothetical protein SELMODRAFT_94736 [Selaginella moellendorffii]
           gi|300161358|gb|EFJ27974.1| hypothetical protein
           SELMODRAFT_94736 [Selaginella moellendorffii]
          Length = 500

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/60 (68%), Positives = 43/60 (71%)
 Frame = +2

Query: 119 PVGVVGVITAWNFPLARFTPKVTPALLVVVQRLSIPLNLHTPLTALAAAELSLQAGIPPG 298
           PVGVVG IT WNFPLA  T KV PAL      +  P  L TPLTALAAAELS+QAGIPPG
Sbjct: 160 PVGVVGTITPWNFPLAMITRKVAPALAAGCTVVIKPAEL-TPLTALAAAELSIQAGIPPG 218


>ref|XP_004154610.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Cucumis sativus]
          Length = 432

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/75 (58%), Positives = 52/75 (69%)
 Frame = +2

Query: 71  ITPLKSDNQIIFYEI*PVGVVGVITAWNFPLARFTPKVTPALLVVVQRLSIPLNLHTPLT 250
           I+P  +D +++  +  PVGVVG+IT WNFPLA  T KV PAL      +  P  L TPLT
Sbjct: 186 ISPTIADRRLLVLKQ-PVGVVGIITPWNFPLAMITRKVGPALASGCTVVIKPSEL-TPLT 243

Query: 251 ALAAAELSLQAGIPP 295
           ALAAAELSLQAGIPP
Sbjct: 244 ALAAAELSLQAGIPP 258


>ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Glycine max]
          Length = 537

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/76 (57%), Positives = 49/76 (64%)
 Frame = +2

Query: 71  ITPLKSDNQIIFYEI*PVGVVGVITAWNFPLARFTPKVTPALLVVVQRLSIPLNLHTPLT 250
           I P    ++ +F    PVGVVG IT WNFPLA  T KV PAL      +  P  L TPLT
Sbjct: 181 IIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSEL-TPLT 239

Query: 251 ALAAAELSLQAGIPPG 298
           ALAAAELS+QAGIPPG
Sbjct: 240 ALAAAELSIQAGIPPG 255


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