BLASTX nr result

ID: Coptis25_contig00020374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020374
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277056.1| PREDICTED: l-Ala-D/L-Glu epimerase [Vitis vi...   264   6e-69
emb|CBI15492.3| unnamed protein product [Vitis vinifera]              263   1e-68
ref|XP_002317902.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-67
ref|XP_004137322.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Cuc...   254   7e-66
ref|XP_003531144.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Gly...   246   2e-63

>ref|XP_002277056.1| PREDICTED: l-Ala-D/L-Glu epimerase [Vitis vinifera]
          Length = 420

 Score =  264 bits (674), Expect = 6e-69
 Identities = 126/149 (84%), Positives = 140/149 (93%)
 Frame = +3

Query: 3   LFEQPVHRDDWEGLGHVTHVAKGKYGISVAADESCRGLVDVQKIIDGKLADVVNIKLAKV 182
           LFEQPVHRDDWEGLGHV+ VA+ KYG+SVAADESCR LVDV+KI++G LA+V+NIKLAKV
Sbjct: 272 LFEQPVHRDDWEGLGHVSKVARDKYGVSVAADESCRSLVDVKKIVEGNLANVINIKLAKV 331

Query: 183 GVLGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPV 362
           GVLGALEIID AR +GL+LMIGGMVETRLAMGFAGHLAAGLGCF+FIDLDTPLLLSEDPV
Sbjct: 332 GVLGALEIIDAARAAGLDLMIGGMVETRLAMGFAGHLAAGLGCFKFIDLDTPLLLSEDPV 391

Query: 363 LGGYEVSGAVYEFTNARGHGGFLHWDSTA 449
             GY+VSGAVY+FTNARGHGGFLHWD+ A
Sbjct: 392 QEGYDVSGAVYKFTNARGHGGFLHWDNIA 420


>emb|CBI15492.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  263 bits (671), Expect = 1e-68
 Identities = 125/147 (85%), Positives = 139/147 (94%)
 Frame = +3

Query: 3   LFEQPVHRDDWEGLGHVTHVAKGKYGISVAADESCRGLVDVQKIIDGKLADVVNIKLAKV 182
           LFEQPVHRDDWEGLGHV+ VA+ KYG+SVAADESCR LVDV+KI++G LA+V+NIKLAKV
Sbjct: 235 LFEQPVHRDDWEGLGHVSKVARDKYGVSVAADESCRSLVDVKKIVEGNLANVINIKLAKV 294

Query: 183 GVLGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPV 362
           GVLGALEIID AR +GL+LMIGGMVETRLAMGFAGHLAAGLGCF+FIDLDTPLLLSEDPV
Sbjct: 295 GVLGALEIIDAARAAGLDLMIGGMVETRLAMGFAGHLAAGLGCFKFIDLDTPLLLSEDPV 354

Query: 363 LGGYEVSGAVYEFTNARGHGGFLHWDS 443
             GY+VSGAVY+FTNARGHGGFLHWD+
Sbjct: 355 QEGYDVSGAVYKFTNARGHGGFLHWDN 381


>ref|XP_002317902.1| predicted protein [Populus trichocarpa] gi|222858575|gb|EEE96122.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  258 bits (660), Expect = 3e-67
 Identities = 123/147 (83%), Positives = 136/147 (92%)
 Frame = +3

Query: 3   LFEQPVHRDDWEGLGHVTHVAKGKYGISVAADESCRGLVDVQKIIDGKLADVVNIKLAKV 182
           LFEQPVHRDDWEGLGHVTH+AKGKYG+SVAADESCR LVD ++II G LADV+NIKLAKV
Sbjct: 238 LFEQPVHRDDWEGLGHVTHIAKGKYGVSVAADESCRSLVDAKRIIKGNLADVINIKLAKV 297

Query: 183 GVLGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPV 362
           GV+G LEII+ AR SGL+LMIGGMVETRLAMGFAGHLAAG GCF+FIDLDTPLLLSEDPV
Sbjct: 298 GVVGGLEIIEEARTSGLDLMIGGMVETRLAMGFAGHLAAGFGCFKFIDLDTPLLLSEDPV 357

Query: 363 LGGYEVSGAVYEFTNARGHGGFLHWDS 443
           L GYEVSGAVY+FT+A+GH GFL WD+
Sbjct: 358 LEGYEVSGAVYKFTDAQGHAGFLDWDN 384


>ref|XP_004137322.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Cucumis sativus]
           gi|449497562|ref|XP_004160436.1| PREDICTED: LOW QUALITY
           PROTEIN: l-Ala-D/L-Glu epimerase-like [Cucumis sativus]
          Length = 432

 Score =  254 bits (648), Expect = 7e-66
 Identities = 119/149 (79%), Positives = 141/149 (94%)
 Frame = +3

Query: 3   LFEQPVHRDDWEGLGHVTHVAKGKYGISVAADESCRGLVDVQKIIDGKLADVVNIKLAKV 182
           LFEQPVHRD+WEGLG+V+ VA+ KYG+SVAADESCR + DV++I++G LADV+NIKLAKV
Sbjct: 283 LFEQPVHRDNWEGLGNVSRVARDKYGVSVAADESCRSVDDVKRIVEGDLADVINIKLAKV 342

Query: 183 GVLGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPV 362
           GVLGA+EII+VAR SGL+LMIGGMVETRLAMGF+GHLAAGLGCF++IDLDTPLLLSEDPV
Sbjct: 343 GVLGAIEIIEVARGSGLSLMIGGMVETRLAMGFSGHLAAGLGCFKYIDLDTPLLLSEDPV 402

Query: 363 LGGYEVSGAVYEFTNARGHGGFLHWDSTA 449
            GGYEVSGAVY+FTN++GHGG+LHWD+ A
Sbjct: 403 HGGYEVSGAVYKFTNSQGHGGYLHWDNIA 431


>ref|XP_003531144.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Glycine max]
          Length = 442

 Score =  246 bits (627), Expect = 2e-63
 Identities = 115/149 (77%), Positives = 136/149 (91%)
 Frame = +3

Query: 3   LFEQPVHRDDWEGLGHVTHVAKGKYGISVAADESCRGLVDVQKIIDGKLADVVNIKLAKV 182
           LFEQPVHRDDW+GL +V ++A+ +YG+SVAADESCR +VDV KI++G + DV+NIKLAKV
Sbjct: 294 LFEQPVHRDDWDGLRYVGNIARERYGVSVAADESCRSIVDVYKIVEGNVLDVINIKLAKV 353

Query: 183 GVLGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPV 362
           GV+GALEII+ A+ +GL+LMIGGMVETRLAMGFAG LAAGLGCF+FIDLDTPLLLS+DPV
Sbjct: 354 GVMGALEIIEKAKAAGLDLMIGGMVETRLAMGFAGQLAAGLGCFKFIDLDTPLLLSDDPV 413

Query: 363 LGGYEVSGAVYEFTNARGHGGFLHWDSTA 449
           L GYEVSGA Y+FTNARGHGGFLHWD+ A
Sbjct: 414 LEGYEVSGATYKFTNARGHGGFLHWDNLA 442


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