BLASTX nr result

ID: Coptis25_contig00020317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020317
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60059.1| hypothetical protein VITISV_039055 [Vitis vinifera]    73   4e-11
emb|CAN73014.1| hypothetical protein VITISV_007603 [Vitis vinifera]    70   5e-10
emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera]    69   6e-10
emb|CAN83808.1| hypothetical protein VITISV_026963 [Vitis vinifera]    69   8e-10
ref|XP_002298693.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-09

>emb|CAN60059.1| hypothetical protein VITISV_039055 [Vitis vinifera]
          Length = 244

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
 Frame = -3

Query: 623 KIVEKNRVFQFLAGLNPEFEYVVVHLLDKHPFPTLEEAHAYCLSDQSRRVPVPHTPGLLS 444
           KI+E+ RVF+FL GLNPE + V V +L K PFP++ E +AY + ++SRRV +    G   
Sbjct: 12  KIMEQERVFEFLVGLNPELDQVRVQILGKEPFPSIREVYAYVIGEESRRVVM--LGGYTP 69

Query: 443 ETSAMAVRYAYXXXXXXXPQTFRAXXXXXXXXPTASGSSRPPNKK----CDHCGKFGHVK 276
           E SA+A    +                       +    R P+ K    C++C K  H +
Sbjct: 70  ENSALATAGNFKSMG-------------------SKVEGRTPDDKDSLWCNYCHKPRHTR 110

Query: 275 ATCYQLHGRP 246
            +C++ HG+P
Sbjct: 111 ESCWKPHGKP 120


>emb|CAN73014.1| hypothetical protein VITISV_007603 [Vitis vinifera]
          Length = 1121

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
 Frame = -3

Query: 638 AEIYAKIVEKNRVFQFLAGLNPEFEYVVVHLLDKHPFPTLEEAHAYCLSDQSRR---VPV 468
           A  Y KIVE+ R+F+F  GLN E + V   ++D  P P+L EA +    ++SR+   +  
Sbjct: 326 AATYRKIVEQKRLFKFFLGLNRELDDVRGRIMDIKPLPSLREAFSEVRREESRKKVMMGS 385

Query: 467 PHTPGLLSETSAMAVRYAYXXXXXXXPQTFRAXXXXXXXXPTASGSSRPPNKK--CDHCG 294
              P    + SA+A R                          +SG  R    +  CD+C 
Sbjct: 386 KEPPAPTLDASALAAR-----------------------SFNSSGGDRQKRDRPWCDYCK 422

Query: 293 KFGHVKATCYQLHGRPPGFQP 231
           K GH K TC++LHG+P  ++P
Sbjct: 423 KLGHYKETCWKLHGKPVDWKP 443


>emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera]
          Length = 1210

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
 Frame = -3

Query: 656 EWPVNAAEI-YAKIVEKNRVFQFLAGLNPEFEYVVVHLLDKHPFPTLEEAHAYCLSDQSR 480
           EW      + + K +E  RVF+FLAGLN E + V   +L + P P++ E  +    ++SR
Sbjct: 154 EWECTGDNVRFKKKMENERVFEFLAGLNRELDNVRSRVLSRRPLPSIREVFSEVRLEESR 213

Query: 479 RVPVPHTPGLLSETSAMAVRYAYXXXXXXXPQTFRAXXXXXXXXPTASGSSRPPNKKCDH 300
           R  V     L S   A A+               R          + SG  +     C+H
Sbjct: 214 R-RVMLREHLSSRPKASAL-------------ITRGPHAGSGGPHSGSGPRQSKRTYCEH 259

Query: 299 CGKFGHVKATCYQLHGRPPGFQP 231
           C K GH K TC+ LHG+P  ++P
Sbjct: 260 CKKLGHTKDTCWTLHGKPANWKP 282


>emb|CAN83808.1| hypothetical protein VITISV_026963 [Vitis vinifera]
          Length = 971

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 56/216 (25%), Positives = 83/216 (38%), Gaps = 6/216 (2%)
 Frame = -3

Query: 632 IYAKIVEKNRVFQFLAGLNPEFEYVVVHLLDKHPFPTLEEAHAYCLSDQSRRVPVPHTPG 453
           +Y K++EK  +++FL GLN   + V   +L   P P++ E  +    ++SR+  +  T  
Sbjct: 167 LYKKVIEKEHIYKFLLGLNKNLDEVRGRVLSIKPLPSVREVFSKIRREESRQKVMLGTQN 226

Query: 452 LLS--ETSAMAVRYAYXXXXXXXPQTFRAXXXXXXXXPTASGSSRPPNKK----CDHCGK 291
                E SA+  R                         T S ++    KK    CDHC K
Sbjct: 227 SSKNLENSALVAR------------------------GTQSNNNNHQTKKNRPWCDHCRK 262

Query: 290 FGHVKATCYQLHGRPPGFQPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRFRQFLSM 111
            GH K TC+ LHG+P  ++P R                                +     
Sbjct: 263 PGHTKETCWHLHGKPADWKPSRPQQNREGRGYTATAE-----------------KDTSGT 305

Query: 110 SSQPGPXXXXXXXXXXXXXXSRTSPWIVDSGATDNM 3
           SS PGP              + T+ WIVDSGA+D+M
Sbjct: 306 SSNPGPFSKEQLEALQKIQENYTT-WIVDSGASDHM 340


>ref|XP_002298693.1| predicted protein [Populus trichocarpa] gi|222845951|gb|EEE83498.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
 Frame = -3

Query: 638 AEIYAKIVEKNRVFQFLAGLNPEFEYVVVHLLDKHPFPTLEEAHAYCLSDQSRRVPVPHT 459
           A I    VE+ R+F+FLAGLN EF+ + V +L K   P+L E  +   +++ RR  +   
Sbjct: 142 AVILKNYVERERIFEFLAGLNIEFDQMRVQILGKESLPSLNEVFSVIRAEEGRRTVMLDA 201

Query: 458 PGLLSETSAMAVRYAYXXXXXXXPQTFRAXXXXXXXXPTASGSSRPPNKK-CDHCGKFGH 282
           P   +E SAM +  +                          G   P +   C++C K GH
Sbjct: 202 PN--TEGSAMLITNSRN----------MGDAMNGAEVGKIEGKKIPKDDLFCNYCKKTGH 249

Query: 281 VKATCYQLHGRPP 243
            K TC++LHG+PP
Sbjct: 250 TKETCWKLHGKPP 262


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