BLASTX nr result

ID: Coptis25_contig00020313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020313
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|2...   135   6e-50
emb|CBI40804.3| unnamed protein product [Vitis vinifera]              132   2e-49
ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660...   132   5e-49
ref|XP_002510760.1| conserved hypothetical protein [Ricinus comm...   134   9e-48
ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   130   5e-46

>ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|222842334|gb|EEE79881.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  135 bits (340), Expect(2) = 6e-50
 Identities = 67/77 (87%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
 Frame = +1

Query: 175 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 351
           SS   FTNSALPSTAQS SCFLS+SANSPGGPS+ +YATGPYAHETQLVSPPVFSTFTTE
Sbjct: 70  SSPASFTNSALPSTAQSPSCFLSLSANSPGGPSSTMYATGPYAHETQLVSPPVFSTFTTE 129

Query: 352 PSTAPFTPPPELNHLTT 402
           PSTAP TPPPEL HLTT
Sbjct: 130 PSTAPLTPPPELAHLTT 146



 Score = 87.4 bits (215), Expect(2) = 6e-50
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = +2

Query: 2   RRRWGGCWGGLSCFGSQKGGKCVVPAFRIPEGNASGNRANGAQPVGMPNQAT 157
           R+RWGGCWG LSCF  QKGGK +VPA RIPEGNAS  + NG QPVG+ NQAT
Sbjct: 8   RKRWGGCWGALSCFSVQKGGKRIVPASRIPEGNASAAQPNGPQPVGLTNQAT 59


>emb|CBI40804.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score =  132 bits (331), Expect(2) = 2e-49
 Identities = 66/77 (85%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
 Frame = +1

Query: 175 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 351
           SS   FTNSALPSTAQS SCFLSMSANSP GPS+ ++ATGPYAHETQLVSPPVFSTFTTE
Sbjct: 81  SSPASFTNSALPSTAQSPSCFLSMSANSPEGPSSTMFATGPYAHETQLVSPPVFSTFTTE 140

Query: 352 PSTAPFTPPPELNHLTT 402
           PSTAP TPPPEL HLTT
Sbjct: 141 PSTAPLTPPPELAHLTT 157



 Score = 89.4 bits (220), Expect(2) = 2e-49
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   RRRWGGCWGGLSCFGSQKGGKCVVPAFRIPEGNASGNRANGAQPVGMPNQAT 157
           R+RWGGCWGGLSCFG+QKGGK +VPA RIPEGNAS  + NG Q VG+ NQ T
Sbjct: 19  RKRWGGCWGGLSCFGTQKGGKRIVPASRIPEGNASATQPNGPQAVGLTNQTT 70


>ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660-like [Vitis vinifera]
          Length = 484

 Score =  132 bits (331), Expect(2) = 5e-49
 Identities = 66/77 (85%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
 Frame = +1

Query: 175 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 351
           SS   FTNSALPSTAQS SCFLSMSANSP GPS+ ++ATGPYAHETQLVSPPVFSTFTTE
Sbjct: 82  SSPASFTNSALPSTAQSPSCFLSMSANSPEGPSSTMFATGPYAHETQLVSPPVFSTFTTE 141

Query: 352 PSTAPFTPPPELNHLTT 402
           PSTAP TPPPEL HLTT
Sbjct: 142 PSTAPLTPPPELAHLTT 158



 Score = 87.8 bits (216), Expect(2) = 5e-49
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   RRRWGGCWGGLSCFGSQKGGKCVVPAFRIPEGNASGNRANGAQPVGMPNQAT 157
           ++RWGGCWGGLSCFG+QKGGK +VPA RIPEGNAS  + NG Q VG+ NQ T
Sbjct: 20  QKRWGGCWGGLSCFGTQKGGKRIVPASRIPEGNASATQPNGPQAVGLTNQTT 71


>ref|XP_002510760.1| conserved hypothetical protein [Ricinus communis]
           gi|223551461|gb|EEF52947.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  134 bits (336), Expect(2) = 9e-48
 Identities = 66/77 (85%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
 Frame = +1

Query: 175 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 351
           SS   FTNSALPSTAQS SCFLS+SANSPGGPS+ ++ATGPYAHETQLVSPPVFSTFTTE
Sbjct: 76  SSPASFTNSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSTFTTE 135

Query: 352 PSTAPFTPPPELNHLTT 402
           PSTAP TPPPEL HLTT
Sbjct: 136 PSTAPLTPPPELAHLTT 152



 Score = 81.6 bits (200), Expect(2) = 9e-48
 Identities = 35/54 (64%), Positives = 41/54 (75%)
 Frame = +2

Query: 2   RRRWGGCWGGLSCFGSQKGGKCVVPAFRIPEGNASGNRANGAQPVGMPNQATNI 163
           R+RWGGCWG  SCF SQKGGK +VPA RIPEGNA+  + NG Q  G+ NQAT +
Sbjct: 14  RKRWGGCWGAFSCFSSQKGGKRIVPASRIPEGNATAAQPNGPQVGGLTNQATTL 67


>ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Glycine max]
          Length = 475

 Score =  130 bits (326), Expect(2) = 5e-46
 Identities = 64/77 (83%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
 Frame = +1

Query: 175 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 351
           SS   FT+SALPSTAQS SCFLS+SANSPGGPS+ ++ATGPYAHETQLVSPPVFS FTTE
Sbjct: 76  SSPASFTHSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSNFTTE 135

Query: 352 PSTAPFTPPPELNHLTT 402
           PSTAP TPPPEL HLTT
Sbjct: 136 PSTAPLTPPPELAHLTT 152



 Score = 79.7 bits (195), Expect(2) = 5e-46
 Identities = 33/54 (61%), Positives = 40/54 (74%)
 Frame = +2

Query: 2   RRRWGGCWGGLSCFGSQKGGKCVVPAFRIPEGNASGNRANGAQPVGMPNQATNI 163
           R+RWGGCWG  SC GSQKGGK +VPA RIP+ N   ++ NG Q VG+ NQAT +
Sbjct: 14  RKRWGGCWGAFSCLGSQKGGKRIVPASRIPDSNGPASQPNGPQVVGLTNQATGL 67


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