BLASTX nr result

ID: Coptis25_contig00020301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020301
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276298.2| PREDICTED: protein ALWAYS EARLY 3-like [Viti...   173   1e-41
emb|CBI26088.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_003572939.1| PREDICTED: protein ALWAYS EARLY 2-like [Brac...   157   6e-37
ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucu...   156   2e-36
ref|XP_004134200.1| PREDICTED: LOW QUALITY PROTEIN: protein ALWA...   156   2e-36

>ref|XP_002276298.2| PREDICTED: protein ALWAYS EARLY 3-like [Vitis vinifera]
          Length = 1146

 Score =  173 bits (438), Expect = 1e-41
 Identities = 96/149 (64%), Positives = 111/149 (74%), Gaps = 4/149 (2%)
 Frame = +1

Query: 1   MMTDHYSTME-SESERESNDEPETSRKPQKRARGKLRSNVSKGSDENSPDLLRSQSVASN 177
           MMTDHY+ +E S+S +ESND   TSRKP KR RGK+R N SK  D + PDL +S   AS+
Sbjct: 107 MMTDHYTVLEGSDSGQESNDGTGTSRKPPKRGRGKIRPNSSKELDGHFPDLSQSPLAASS 166

Query: 178 YGCLSLLKKKRSGGSRPRAVGKRTPRFPVSYSYDKYESQKFVSPNKQVRKSEVDTNDDEV 357
           YGCLSLLKKKRS GSRPRAVGKRTPRFPVSYSYDK   QK+ SP +Q  K +VD+ DD+V
Sbjct: 167 YGCLSLLKKKRS-GSRPRAVGKRTPRFPVSYSYDKDNGQKYFSPTRQGLKLKVDSVDDDV 225

Query: 358 A---VLVLAEALQRGGSPHVSQTPKRTKQ 435
           A    L LA+A QRGGSP VSQTP   +Q
Sbjct: 226 AHEVALTLAKASQRGGSPQVSQTPIEVQQ 254


>emb|CBI26088.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score =  169 bits (428), Expect = 2e-40
 Identities = 91/138 (65%), Positives = 105/138 (76%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1   MMTDHYSTME-SESERESNDEPETSRKPQKRARGKLRSNVSKGSDENSPDLLRSQSVASN 177
           MMTDHY+ +E S+S +ESND   TSRKP KR RGK+R N SK  D + PDL +S   AS+
Sbjct: 107 MMTDHYTVLEGSDSGQESNDGTGTSRKPPKRGRGKIRPNSSKELDGHFPDLSQSPLAASS 166

Query: 178 YGCLSLLKKKRSGGSRPRAVGKRTPRFPVSYSYDKYESQKFVSPNKQVRKSEVDTNDDEV 357
           YGCLSLLKKKRSGGSRPRAVGKRTPRFPVSYSYDK   QK+ SP +Q  K +VD+ DD+V
Sbjct: 167 YGCLSLLKKKRSGGSRPRAVGKRTPRFPVSYSYDKDNGQKYFSPTRQGLKLKVDSVDDDV 226

Query: 358 A---VLVLAEALQRGGSP 402
           A    L LA+A QRGGSP
Sbjct: 227 AHEVALTLAKASQRGGSP 244


>ref|XP_003572939.1| PREDICTED: protein ALWAYS EARLY 2-like [Brachypodium distachyon]
          Length = 1165

 Score =  157 bits (398), Expect = 6e-37
 Identities = 88/156 (56%), Positives = 109/156 (69%), Gaps = 4/156 (2%)
 Frame = +1

Query: 1   MMTDHYSTME-SESERESNDEPETSRKPQKRARGKLRSNVSKGSDENSPDLLRSQSVASN 177
           MMTDHY+ ++ S S+ ESN+ P+TSRKPQKR R KL+S VSK SD    DLL+SQ  +SN
Sbjct: 106 MMTDHYNILDGSNSDHESNESPKTSRKPQKRGRAKLQS-VSKTSDTRYADLLQSQPSSSN 164

Query: 178 YGCLSLLKKKRSGGSRPRAVGKRTPRFPVSYSYDKYESQKFVSPNKQVRKSEVDTNDDE- 354
           YGCLSLLKKKRSGG+RPRAVGKRTPR PV+  Y + +    + P+ +  K + +  DDE 
Sbjct: 165 YGCLSLLKKKRSGGNRPRAVGKRTPRVPVASMYHRDDR---IGPSNRQSKPDANNGDDEG 221

Query: 355 --VAVLVLAEALQRGGSPHVSQTPKRTKQLMRSSPV 456
             VA L LAE  QRG SP +SQTP R+   +  SPV
Sbjct: 222 ARVAALALAEVGQRGSSPQISQTPGRSSDRLFLSPV 257


>ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucumis sativus]
          Length = 1161

 Score =  156 bits (394), Expect = 2e-36
 Identities = 91/159 (57%), Positives = 110/159 (69%), Gaps = 5/159 (3%)
 Frame = +1

Query: 1   MMTDHYSTM-ESESERESNDEPETSRKPQKRARGKLRSNVSKGSDENSPDLLRSQSVASN 177
           MMTDHYS + +SESE+ESN++    RKPQKR RGK RS+  KGSD +  D  +SQ + +N
Sbjct: 107 MMTDHYSVLRDSESEQESNEDSGAIRKPQKRLRGKSRSSNLKGSDAHFGDASQSQLLLTN 166

Query: 178 YGCLSLLKKKRSGGSRPRAVGKRTPRFPVSYSYDKYESQKFVSPNKQVRKSEV-DTNDDE 354
           YGCLSLLKK+RS G +P AVGKRTPR PVSYSYDK    K  SP+K   K++V D NDD+
Sbjct: 167 YGCLSLLKKRRS-GIKPHAVGKRTPRVPVSYSYDKDGRDKLFSPSKHNSKAKVDDPNDDD 225

Query: 355 VA---VLVLAEALQRGGSPHVSQTPKRTKQLMRSSPVVN 462
           VA    LVL EA QR GSP +SQTP    +    SP+ N
Sbjct: 226 VAHEIALVLTEASQRDGSPQLSQTPNPKIESHVLSPIRN 264


>ref|XP_004134200.1| PREDICTED: LOW QUALITY PROTEIN: protein ALWAYS EARLY 3-like
           [Cucumis sativus]
          Length = 1161

 Score =  156 bits (394), Expect = 2e-36
 Identities = 91/159 (57%), Positives = 110/159 (69%), Gaps = 5/159 (3%)
 Frame = +1

Query: 1   MMTDHYSTM-ESESERESNDEPETSRKPQKRARGKLRSNVSKGSDENSPDLLRSQSVASN 177
           MMTDHYS + +SESE+ESN++    RKPQKR RGK RS+  KGSD +  D  +SQ + +N
Sbjct: 107 MMTDHYSVLRDSESEQESNEDSGAIRKPQKRLRGKSRSSNLKGSDAHFGDASQSQLLLTN 166

Query: 178 YGCLSLLKKKRSGGSRPRAVGKRTPRFPVSYSYDKYESQKFVSPNKQVRKSEV-DTNDDE 354
           YGCLSLLKK+RS G +P AVGKRTPR PVSYSYDK    K  SP+K   K++V D NDD+
Sbjct: 167 YGCLSLLKKRRS-GIKPHAVGKRTPRVPVSYSYDKDGRDKLFSPSKHNSKAKVDDPNDDD 225

Query: 355 VA---VLVLAEALQRGGSPHVSQTPKRTKQLMRSSPVVN 462
           VA    LVL EA QR GSP +SQTP    +    SP+ N
Sbjct: 226 VAHEIALVLTEASQRDGSPQLSQTPNPKIESHVLSPIRN 264


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