BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020296
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37668.1| gag protein [Populus trichocarpa]                      103   1e-20
gb|ABG37657.1| integrase [Populus trichocarpa]                        103   1e-20
emb|CAN60074.1| hypothetical protein VITISV_020988 [Vitis vinifera]   101   6e-20
gb|ABG37671.1| integrase [Populus trichocarpa]                        101   7e-20
emb|CAN73390.1| hypothetical protein VITISV_009750 [Vitis vinifera]   100   1e-19

>gb|ABG37668.1| gag protein [Populus trichocarpa]
          Length = 1886

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +3

Query: 9   PKAPFPQRLIQAKKSSNLNEIMEMFKQVQINILLLDAIKQVLSYAKFLKDLCTQKCKLNV 188
           P  PFP  + + +K ++ +EI+E FKQV+INI LLDAIKQV SYAKFLKDLCT K KLNV
Sbjct: 245 PALPFPHAMSKQRKVNHNSEILETFKQVRINIPLLDAIKQVPSYAKFLKDLCTVKRKLNV 304

Query: 189 HKKAFLTEQVSSIIQNRTPPKFRD 260
            KKAFL EQVS+I+QN    K++D
Sbjct: 305 KKKAFLAEQVSAILQNNNALKYKD 328


>gb|ABG37657.1| integrase [Populus trichocarpa]
          Length = 1738

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +3

Query: 9   PKAPFPQRLIQAKKSSNLNEIMEMFKQVQINILLLDAIKQVLSYAKFLKDLCTQKCKLNV 188
           P  PFP  + + +K ++ +EI+E FKQV+INI LLDAIKQV SYAKFLKDLCT K KLNV
Sbjct: 97  PALPFPHAMSKQRKVNHNSEILETFKQVRINIPLLDAIKQVPSYAKFLKDLCTVKRKLNV 156

Query: 189 HKKAFLTEQVSSIIQNRTPPKFRD 260
            KKAFL EQVS+I+QN    K++D
Sbjct: 157 KKKAFLAEQVSAILQNNNALKYKD 180


>emb|CAN60074.1| hypothetical protein VITISV_020988 [Vitis vinifera]
          Length = 1536

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/81 (61%), Positives = 66/81 (81%)
 Frame = +3

Query: 18  PFPQRLIQAKKSSNLNEIMEMFKQVQINILLLDAIKQVLSYAKFLKDLCTQKCKLNVHKK 197
           PFPQ L   K+++N +EI E+ +QV++NI LLD IKQV +YAKFLKDLCT K  LN++KK
Sbjct: 463 PFPQALHGKKETNNASEIFEVLRQVKVNIPLLDVIKQVPTYAKFLKDLCTVKKGLNINKK 522

Query: 198 AFLTEQVSSIIQNRTPPKFRD 260
           AFLTEQVS+IIQ ++P K++D
Sbjct: 523 AFLTEQVSAIIQCKSPVKYKD 543


>gb|ABG37671.1| integrase [Populus trichocarpa]
          Length = 1332

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/85 (60%), Positives = 65/85 (76%)
 Frame = +3

Query: 6   IPKAPFPQRLIQAKKSSNLNEIMEMFKQVQINILLLDAIKQVLSYAKFLKDLCTQKCKLN 185
           +P  PFP  + + +K ++ +EI E FKQV+INI LLDAIK+V SYAKFLKDLCT K KLN
Sbjct: 96  LPAHPFPHAMTKQRKVNHNSEIFETFKQVRINIPLLDAIKEVPSYAKFLKDLCTVKRKLN 155

Query: 186 VHKKAFLTEQVSSIIQNRTPPKFRD 260
           V KKAFL +QVS+I+QN    K++D
Sbjct: 156 VKKKAFLAKQVSAILQNNNALKYKD 180


>emb|CAN73390.1| hypothetical protein VITISV_009750 [Vitis vinifera]
          Length = 1013

 Score =  100 bits (250), Expect = 1e-19
 Identities = 52/81 (64%), Positives = 64/81 (79%)
 Frame = +3

Query: 18  PFPQRLIQAKKSSNLNEIMEMFKQVQINILLLDAIKQVLSYAKFLKDLCTQKCKLNVHKK 197
           PFPQ L   K   N +EI+E+ +QV++NI LLD IKQV SYAKFLKDLCT K  LNV+KK
Sbjct: 520 PFPQALHGKKXIKNASEILEVLRQVKVNIPLLDVIKQVPSYAKFLKDLCTIKRGLNVNKK 579

Query: 198 AFLTEQVSSIIQNRTPPKFRD 260
           AFLTEQVS+IIQ ++P K++D
Sbjct: 580 AFLTEQVSAIIQCKSPLKYKD 600