BLASTX nr result
ID: Coptis25_contig00020276
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020276 (293 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-12 gb|AAG52583.1|AC016529_14 unknown protein; 66073-62011 [Arabidop... 76 3e-12 ref|NP_177383.5| uncharacterized protein [Arabidopsis thaliana] ... 76 3e-12 ref|XP_002887433.1| hypothetical protein ARALYDRAFT_316204 [Arab... 75 7e-12 ref|XP_002529195.1| DNA binding protein, putative [Ricinus commu... 73 2e-11 >ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|222873307|gb|EEF10438.1| predicted protein [Populus trichocarpa] Length = 1341 Score = 76.3 bits (186), Expect = 3e-12 Identities = 45/88 (51%), Positives = 53/88 (60%) Frame = -1 Query: 269 SSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXXXXXPMSPRLSSGTLPPLNTTNA 90 +S LQAVV+ QVGSPS M PMSP+LSSG + +++ N Sbjct: 1243 TSSLQAVVAPSQVGSPSTMGIPLLNQQTQQQPSPQQMSQRTPMSPQLSSGAIHAISSGNP 1302 Query: 89 GTGPPSPQLSSQTLGSVGSITSSSMELQ 6 GP SPQLSSQTLGSVGSIT+S MELQ Sbjct: 1303 EAGPASPQLSSQTLGSVGSITNSPMELQ 1330 >gb|AAG52583.1|AC016529_14 unknown protein; 66073-62011 [Arabidopsis thaliana] Length = 1088 Score = 75.9 bits (185), Expect = 3e-12 Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 7/96 (7%) Frame = -1 Query: 269 SSPLQAVVSSPQVGSPSA-------MAXXXXXXXXXXXXXXXXXXXXXPMSPRLSSGTLP 111 +SPLQ+V+S PQVGSPSA PMSP++SSG + Sbjct: 983 ASPLQSVLSPPQVGSPSAGITQQQLQQSSPQQMSQRTPMSPQQVNQRTPMSPQISSGAMH 1042 Query: 110 PLNTTNAGTGPPSPQLSSQTLGSVGSITSSSMELQG 3 P++T+N P SPQLSSQT+GSVGSIT+S MELQG Sbjct: 1043 PMSTSNLEGCPASPQLSSQTMGSVGSITNSPMELQG 1078 >ref|NP_177383.5| uncharacterized protein [Arabidopsis thaliana] gi|332197194|gb|AEE35315.1| uncharacterized protein [Arabidopsis thaliana] Length = 1325 Score = 75.9 bits (185), Expect = 3e-12 Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 7/96 (7%) Frame = -1 Query: 269 SSPLQAVVSSPQVGSPSA-------MAXXXXXXXXXXXXXXXXXXXXXPMSPRLSSGTLP 111 +SPLQ+V+S PQVGSPSA PMSP++SSG + Sbjct: 1220 ASPLQSVLSPPQVGSPSAGITQQQLQQSSPQQMSQRTPMSPQQVNQRTPMSPQISSGAMH 1279 Query: 110 PLNTTNAGTGPPSPQLSSQTLGSVGSITSSSMELQG 3 P++T+N P SPQLSSQT+GSVGSIT+S MELQG Sbjct: 1280 PMSTSNLEGCPASPQLSSQTMGSVGSITNSPMELQG 1315 >ref|XP_002887433.1| hypothetical protein ARALYDRAFT_316204 [Arabidopsis lyrata subsp. lyrata] gi|297333274|gb|EFH63692.1| hypothetical protein ARALYDRAFT_316204 [Arabidopsis lyrata subsp. lyrata] Length = 1310 Score = 74.7 bits (182), Expect = 7e-12 Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 7/96 (7%) Frame = -1 Query: 269 SSPLQAVVSSPQVGSPSA-------MAXXXXXXXXXXXXXXXXXXXXXPMSPRLSSGTLP 111 +SPLQ+V+S QVGSPSA PMSP++SSGT+ Sbjct: 1205 ASPLQSVLSPAQVGSPSAGITQQQLQQSSPQQMSQRTPMSPQQMNQRTPMSPQISSGTMH 1264 Query: 110 PLNTTNAGTGPPSPQLSSQTLGSVGSITSSSMELQG 3 P++T+N P SPQLSSQT+GSVGSIT+S MELQG Sbjct: 1265 PMSTSNLEGCPASPQLSSQTMGSVGSITNSPMELQG 1300 >ref|XP_002529195.1| DNA binding protein, putative [Ricinus communis] gi|223531373|gb|EEF33209.1| DNA binding protein, putative [Ricinus communis] Length = 1374 Score = 73.2 bits (178), Expect = 2e-11 Identities = 46/91 (50%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Frame = -1 Query: 269 SSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXXXXXP--MSPRLSSGTLPPLNTT 96 SS LQAVVSS QVGSPS M MSP++SSG + ++ Sbjct: 1274 SSSLQAVVSSSQVGSPSTMGIPQLNQQQQPQQQPSPQQMSQRTPMSPQISSGAIHAMSAG 1333 Query: 95 NAGTGPPSPQLSSQTLGSVGSITSSSMELQG 3 N P SPQLSSQTLGSVGSIT+S MELQG Sbjct: 1334 NPEACPASPQLSSQTLGSVGSITNSPMELQG 1364