BLASTX nr result
ID: Coptis25_contig00020264
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020264 (969 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 ... 62 2e-19 ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [S... 50 7e-16 ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S... 70 5e-15 gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 55 7e-15 gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 55 7e-15 >ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor] gi|241947006|gb|EES20151.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor] Length = 821 Score = 61.6 bits (148), Expect(3) = 2e-19 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = -2 Query: 470 EIKVWYFSGIYASPDPVICTTQWEQLHLFKPPSRQPWLCLGDLNEVLKPEEKRGRVPFSP 291 +I W +G Y P W L + S PWLCLGD NEVL EE+ G + Sbjct: 173 KISHWRLTGFYGEPRWERRRESWYLLRFLRAQSSDPWLCLGDFNEVLAMEEQMG----AN 228 Query: 290 SKAQWLIQA----MNNCELFDIGYKGPVFTW 210 + W + A +N+C L D+G+ G +TW Sbjct: 229 EREMWQVTAFQDVVNDCALTDLGFHGLPYTW 259 Score = 53.1 bits (126), Expect(3) = 2e-19 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = -3 Query: 757 MIVLSWNCRGVGLNSTRQELKNAITVERPSLVFVCETKSGWKKSGRLIRKLGFSDACIVP 578 M VLS NCRG G QE+ + ++P++VF+ ET+ G +K+ L R+LGF +A +V Sbjct: 76 MNVLSLNCRGCGRPEAVQEIHQLVVEKKPAVVFLMETRMGEEKALGLARRLGFQNAIVVK 135 Query: 577 SQ 572 S+ Sbjct: 136 SE 137 Score = 27.3 bits (59), Expect(3) = 2e-19 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 6/41 (14%) Frame = -3 Query: 130 LYHKHSTESDHKMLVIKPNTTTP------YHPRPFRFEAFW 26 ++H +TESDH L+++ P +PFR+E W Sbjct: 291 VFHLPTTESDHAGLLVEVRHQEPGAQTRRRRHKPFRYENMW 331 >ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [Sorghum bicolor] gi|241938714|gb|EES11859.1| hypothetical protein SORBIDRAFT_06g002845 [Sorghum bicolor] Length = 993 Score = 50.4 bits (119), Expect(3) = 7e-16 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%) Frame = -2 Query: 443 IYASPDPVICTTQWEQ-LHLFKPPSRQPWLCLGDLNEVLKPEEKRGRVPFSPSKAQWLIQ 267 IY P TT W + L+ S P L +GD+NE++ EK G + Sbjct: 135 IYGDPHHRNTTTIWTRVLNFVVNHSTLPILAMGDMNELMNANEKCGSGKADIRRINMFCD 194 Query: 266 AMNNCELFDIGYKGPVFTWCGQK-GWNRTHERIGKC 162 + C D+GY GP +TW ++ T +R+ +C Sbjct: 195 YVKQCGFLDLGYSGPAYTWTNKRFSTTPTFQRLDRC 230 Score = 42.7 bits (99), Expect(3) = 7e-16 Identities = 18/52 (34%), Positives = 30/52 (57%) Frame = -3 Query: 172 LANVEWRLCFPNDCLYHKHSTESDHKMLVIKPNTTTPYHPRPFRFEAFWLEE 17 LAN EW + +P +YH SDH ++ ++T ++ + FRF+ +WL E Sbjct: 231 LANAEWCMAYPRTTVYHLPMRRSDHAPILTMLDSTRHHNNKIFRFKNWWLME 282 Score = 37.0 bits (84), Expect(3) = 7e-16 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = -3 Query: 757 MIVLSWNCRGVG---LNSTRQELKNAITVERPSLVFVCETKSGWKKSGRLIRKLGFSDAC 587 M +LSWNC+G +ST Q L IT + + F+ ET++ ++ + DA Sbjct: 27 MNLLSWNCQGSAGSLRSSTMQHLARLITSTKSQVCFISETRNTSISRTAIVNRFNVLDAF 86 Query: 586 IVPSQXXXXXXXXXXSDLCTVTIL 515 +V +Q + ++TI+ Sbjct: 87 VVQAQGQSGGLWLIWTQAVSITII 110 >ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor] gi|241941722|gb|EES14867.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor] Length = 589 Score = 70.1 bits (170), Expect(2) = 5e-15 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Frame = -2 Query: 458 WYFSGIYASPDPVICTTQWEQLH--LFKPPSRQPWLCLGDLNEVLKPEEKRGRVPFSPSK 285 W F+GIY P + W+ L + + Q WLC GD NEVL EK G VP + Sbjct: 346 WRFTGIYGEPQEAMKWKTWQLLQDLAAQHQNNQAWLCAGDFNEVLYQHEKEGGVPRPQNS 405 Query: 284 AQWLIQAMNNCELFDIGYKGPVFTWCGQKGWNRTHER 174 QA+ EL D+G++G VFTW ++ +H R Sbjct: 406 MDRFKQALEVSELHDLGFEGNVFTWRNKQSKGESHIR 442 Score = 37.7 bits (86), Expect(2) = 5e-15 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = -3 Query: 175 ALANVEWRLCFPNDCLYHKHSTESDHKMLVIKPNT----TTPYHPRPFRFEAFWLEETGC 8 A+AN EW FP + + + SDH+ LV+ P PF+FEA WL+E G Sbjct: 448 AVANFEWLAKFPLVRVKNGDTYHSDHRALVVCTEDDLVGRKPKAQGPFKFEAEWLKEEGF 507 Query: 7 QE 2 ++ Sbjct: 508 KD 509 >gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1585 Score = 55.1 bits (131), Expect(3) = 7e-15 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%) Frame = -2 Query: 461 VWYFSGIYASPDPVICTTQWEQLHLFKPPSRQPWLCLGDLNEVLKPEEKRGRVPFSPSKA 282 +W+ + +Y P W L+ K S WL +GD NE L E R P S ++ Sbjct: 561 LWHATFVYGEPRVENRHKMWSLLNSIKQSSNLSWLVIGDFNEALWQFEHFSRKPRSDAQM 620 Query: 281 QWLIQAMNNCELFDIGYKGPVFTWCGQK-GWNRTHERIGK 165 Q ++ CEL D+G G T+ ++ GWN R+ + Sbjct: 621 QAFRDVLDTCELHDLGISGLPHTYDNRRGGWNNVKVRLDR 660 Score = 47.0 bits (110), Expect(3) = 7e-15 Identities = 33/96 (34%), Positives = 41/96 (42%) Frame = -3 Query: 760 AMIVLSWNCRGVGLNSTRQELKNAITVERPSLVFVCETKSGWKKSGRLIRKLGFSDACIV 581 AM LSWNCRG+G +T QEL + VF+CET+ K RL +LG V Sbjct: 461 AMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGV 520 Query: 580 PSQXXXXXXXXXXSDLCTVTILYKSSWIIHVEIHES 473 S + V IL K+ I I S Sbjct: 521 SSDGMSGGLALFWHESVHVEILNKNERFIDAYIRLS 556 Score = 24.6 bits (52), Expect(3) = 7e-15 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 175 ALANVEWRLCFPNDCLYHKHSTESDHKMLVIKPNTTTP 62 ALA+ EWR F + H S S+H +V+K + + P Sbjct: 661 ALADDEWRDLFSQYQVQHLVSPCSNHCPIVLKLHGSVP 698 >gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1557 Score = 55.1 bits (131), Expect(3) = 7e-15 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%) Frame = -2 Query: 461 VWYFSGIYASPDPVICTTQWEQLHLFKPPSRQPWLCLGDLNEVLKPEEKRGRVPFSPSKA 282 +W+ + +Y P W L+ K S WL +GD NE L E R P S ++ Sbjct: 533 LWHATFVYGEPRVENRHKMWSLLNSIKQSSNLSWLVIGDFNEALWQFEHFSRKPRSDAQM 592 Query: 281 QWLIQAMNNCELFDIGYKGPVFTWCGQK-GWNRTHERIGK 165 Q ++ CEL D+G G T+ ++ GWN R+ + Sbjct: 593 QAFRDVLDTCELHDLGISGLPHTYDNRRGGWNNVKVRLDR 632 Score = 47.0 bits (110), Expect(3) = 7e-15 Identities = 33/96 (34%), Positives = 41/96 (42%) Frame = -3 Query: 760 AMIVLSWNCRGVGLNSTRQELKNAITVERPSLVFVCETKSGWKKSGRLIRKLGFSDACIV 581 AM LSWNCRG+G +T QEL + VF+CET+ K RL +LG V Sbjct: 433 AMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGV 492 Query: 580 PSQXXXXXXXXXXSDLCTVTILYKSSWIIHVEIHES 473 S + V IL K+ I I S Sbjct: 493 SSDGMSGGLALFWHESVHVEILNKNERFIDAYIRLS 528 Score = 24.6 bits (52), Expect(3) = 7e-15 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 175 ALANVEWRLCFPNDCLYHKHSTESDHKMLVIKPNTTTP 62 ALA+ EWR F + H S S+H +V+K + + P Sbjct: 633 ALADDEWRDLFSQYQVQHLVSPCSNHCPIVLKLHGSVP 670