BLASTX nr result

ID: Coptis25_contig00020261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020261
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282016.2| PREDICTED: uncharacterized protein LOC100262...   207   9e-52
emb|CBI20954.3| unnamed protein product [Vitis vinifera]              207   9e-52
ref|XP_002516594.1| zinc finger protein, putative [Ricinus commu...   201   7e-50
ref|XP_002308627.1| predicted protein [Populus trichocarpa] gi|2...   199   3e-49
ref|XP_003526444.1| PREDICTED: uncharacterized protein LOC100813...   198   4e-49

>ref|XP_002282016.2| PREDICTED: uncharacterized protein LOC100262933 [Vitis vinifera]
          Length = 2871

 Score =  207 bits (526), Expect = 9e-52
 Identities = 108/169 (63%), Positives = 122/169 (72%), Gaps = 12/169 (7%)
 Frame = +2

Query: 2    VYEWPKDLLTRLVFERGSTDAAGKVADIMGADFVNEVISACVPPVFPPRXXXXXXXXXXX 181
            VYEWPKDLLTRLVF+RGSTDAAGKVA+IM ADFV+EVISACVPPV+PPR           
Sbjct: 1454 VYEWPKDLLTRLVFDRGSTDAAGKVAEIMCADFVHEVISACVPPVYPPRSGHGWACIPVI 1513

Query: 182  XXXX------------SKEAKTXXXXXXLAAPGNPLYPLEMNIVKHLVKLSPVRAVLACV 325
                            S+EAK        A PG PLYPL+++IVKHLVKLSPVRAVLACV
Sbjct: 1514 PTCPKSNSENKVLSPSSREAKPNFYSRSSATPGVPLYPLQLDIVKHLVKLSPVRAVLACV 1573

Query: 326  FGSSILHGGSEVGTSSTLNGRVAQAPDTDRVFYEFALDHSERFPTLNRW 472
            FGSSIL+ G++   SS+LN  + QAPD DR+FYEFALD SERFPTLNRW
Sbjct: 1574 FGSSILYNGNDSSLSSSLNSGLLQAPDADRLFYEFALDQSERFPTLNRW 1622


>emb|CBI20954.3| unnamed protein product [Vitis vinifera]
          Length = 2483

 Score =  207 bits (526), Expect = 9e-52
 Identities = 108/169 (63%), Positives = 122/169 (72%), Gaps = 12/169 (7%)
 Frame = +2

Query: 2    VYEWPKDLLTRLVFERGSTDAAGKVADIMGADFVNEVISACVPPVFPPRXXXXXXXXXXX 181
            VYEWPKDLLTRLVF+RGSTDAAGKVA+IM ADFV+EVISACVPPV+PPR           
Sbjct: 1066 VYEWPKDLLTRLVFDRGSTDAAGKVAEIMCADFVHEVISACVPPVYPPRSGHGWACIPVI 1125

Query: 182  XXXX------------SKEAKTXXXXXXLAAPGNPLYPLEMNIVKHLVKLSPVRAVLACV 325
                            S+EAK        A PG PLYPL+++IVKHLVKLSPVRAVLACV
Sbjct: 1126 PTCPKSNSENKVLSPSSREAKPNFYSRSSATPGVPLYPLQLDIVKHLVKLSPVRAVLACV 1185

Query: 326  FGSSILHGGSEVGTSSTLNGRVAQAPDTDRVFYEFALDHSERFPTLNRW 472
            FGSSIL+ G++   SS+LN  + QAPD DR+FYEFALD SERFPTLNRW
Sbjct: 1186 FGSSILYNGNDSSLSSSLNSGLLQAPDADRLFYEFALDQSERFPTLNRW 1234


>ref|XP_002516594.1| zinc finger protein, putative [Ricinus communis]
            gi|223544414|gb|EEF45935.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 2515

 Score =  201 bits (510), Expect = 7e-50
 Identities = 106/169 (62%), Positives = 121/169 (71%), Gaps = 12/169 (7%)
 Frame = +2

Query: 2    VYEWPKDLLTRLVFERGSTDAAGKVADIMGADFVNEVISACVPPVFPPRXXXXXXXXXXX 181
            VYEWPKDLLTRLVF+RGSTDAAGKVADIM ADFV+EVISACVPPV+PPR           
Sbjct: 1095 VYEWPKDLLTRLVFDRGSTDAAGKVADIMCADFVHEVISACVPPVYPPRSGHGWACIPVI 1154

Query: 182  XXXX------------SKEAKTXXXXXXLAAPGNPLYPLEMNIVKHLVKLSPVRAVLACV 325
                            SKEAK        A  G PLYPL+++IVKHLVK+SPVRAVLACV
Sbjct: 1155 PTCPKNCSDNKVLPFTSKEAKPNCYSRSSATSGVPLYPLQLDIVKHLVKISPVRAVLACV 1214

Query: 326  FGSSILHGGSEVGTSSTLNGRVAQAPDTDRVFYEFALDHSERFPTLNRW 472
            FGS IL+ GS+   S++L+  ++ APDTDR+FYEFALD SERFPTLNRW
Sbjct: 1215 FGSGILNIGSDSSMSNSLDDALSPAPDTDRLFYEFALDQSERFPTLNRW 1263


>ref|XP_002308627.1| predicted protein [Populus trichocarpa] gi|222854603|gb|EEE92150.1|
            predicted protein [Populus trichocarpa]
          Length = 2467

 Score =  199 bits (505), Expect = 3e-49
 Identities = 104/169 (61%), Positives = 117/169 (69%), Gaps = 12/169 (7%)
 Frame = +2

Query: 2    VYEWPKDLLTRLVFERGSTDAAGKVADIMGADFVNEVISACVPPVFPPRXXXXXXXXXXX 181
            VYEWPKDLLTRLVF+RGSTDAAGKVADIM ADFV+EVISACVPPV+PPR           
Sbjct: 1050 VYEWPKDLLTRLVFDRGSTDAAGKVADIMCADFVHEVISACVPPVYPPRSGHAWACIPVA 1109

Query: 182  XXXXS------------KEAKTXXXXXXLAAPGNPLYPLEMNIVKHLVKLSPVRAVLACV 325
                             KEAK        A PG PLYPL+++IVKHLVK+SPVRAVLACV
Sbjct: 1110 ATFHKSYAENKVLSPACKEAKPNCYRSFSATPGIPLYPLQLDIVKHLVKISPVRAVLACV 1169

Query: 326  FGSSILHGGSEVGTSSTLNGRVAQAPDTDRVFYEFALDHSERFPTLNRW 472
            FG SIL+ GS+   S +++    Q PD DR+FYEFALD SERFPTLNRW
Sbjct: 1170 FGRSILYSGSDSSMSGSMDDGSLQEPDNDRLFYEFALDQSERFPTLNRW 1218


>ref|XP_003526444.1| PREDICTED: uncharacterized protein LOC100813647 [Glycine max]
          Length = 2475

 Score =  198 bits (503), Expect = 4e-49
 Identities = 104/169 (61%), Positives = 118/169 (69%), Gaps = 12/169 (7%)
 Frame = +2

Query: 2    VYEWPKDLLTRLVFERGSTDAAGKVADIMGADFVNEVISACVPPVFPPRXXXXXXXXXXX 181
            VYEWPKDLLTRLVFERGSTDAAGKVA+IM ADFV+EVISACVPPV+PPR           
Sbjct: 1060 VYEWPKDLLTRLVFERGSTDAAGKVAEIMYADFVHEVISACVPPVYPPRSGHGWACIPVV 1119

Query: 182  XXXX------------SKEAKTXXXXXXLAAPGNPLYPLEMNIVKHLVKLSPVRAVLACV 325
                            SK+AK        A PG  LYPL++++VKHL K+SPVRAVLACV
Sbjct: 1120 PTFPKSSSDNKVLSPSSKDAKPNCYCRSSATPGVALYPLQLDVVKHLAKISPVRAVLACV 1179

Query: 326  FGSSILHGGSEVGTSSTLNGRVAQAPDTDRVFYEFALDHSERFPTLNRW 472
            FGSSIL+  S    SS+L+  + QAPD DR+FYEFALD SERFPTLNRW
Sbjct: 1180 FGSSILYNSSSSSISSSLSDGLLQAPDADRLFYEFALDQSERFPTLNRW 1228


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