BLASTX nr result

ID: Coptis25_contig00020245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020245
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE99581.1| hypothetical protein [Arabidopsis thaliana]           118   1e-24
gb|AAP21212.1| At3g28370 [Arabidopsis thaliana]                        97   3e-18
ref|XP_002517425.1| conserved hypothetical protein [Ricinus comm...    92   2e-16
ref|XP_002438144.1| hypothetical protein SORBIDRAFT_10g008750 [S...    88   2e-15
gb|AFW76857.1| hypothetical protein ZEAMMB73_834489 [Zea mays]         78   2e-12

>dbj|BAE99581.1| hypothetical protein [Arabidopsis thaliana]
          Length = 182

 Score =  118 bits (296), Expect = 1e-24
 Identities = 67/170 (39%), Positives = 100/170 (58%)
 Frame = +2

Query: 2   SQVEALKTEERIHRDDFINQMVEFNKMIRKSQETIACIFHEDTKITSSSDNGDKVEDKQT 181
           S+V+ALK +E + RD FI+QM E NK IR+ Q+T+      D+ ++S    G     K +
Sbjct: 15  SEVDALKNKEGLLRDQFISQMEELNKEIREFQKTV------DSSLSSDDGIGITANVKAS 68

Query: 182 MLDVQVALNDLEDKLELITSQTHKQEVEYQENQDKQTKVQQELVDWEKNASFIKAVVKET 361
                  L  ++  L  + SQ  K+E  Y   Q  Q ++Q+EL D+EK  S ++A+  +T
Sbjct: 69  EDGSGADLEAIKGMLSEVNSQLAKEEEGYLAEQKIQEQLQKELDDYEKKMSLMEAITDKT 128

Query: 362 KELQELTRQTAESEETCAALGEELQRRCACPSCHLDNIGALGGILEADQE 511
             +Q LTRQT+E E+T A+LGEELQRRC C  C  +N+  L  +L+ DQ+
Sbjct: 129 NSVQVLTRQTSELEQTLASLGEELQRRCRCQHCEAENLEVLSLLLQGDQD 178


>gb|AAP21212.1| At3g28370 [Arabidopsis thaliana]
          Length = 148

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 56/150 (37%), Positives = 84/150 (56%)
 Frame = +2

Query: 62  MVEFNKMIRKSQETIACIFHEDTKITSSSDNGDKVEDKQTMLDVQVALNDLEDKLELITS 241
           M E NK IR+ Q+T+      D+ ++S    G     K +       L  ++  L  + S
Sbjct: 1   MEELNKEIREFQKTV------DSSLSSDDGIGITANVKASEDGSGADLEAIKGMLSEVNS 54

Query: 242 QTHKQEVEYQENQDKQTKVQQELVDWEKNASFIKAVVKETKELQELTRQTAESEETCAAL 421
           Q  K+E  Y   Q  Q ++Q+EL D+EK  S ++A+  +T  +Q LTRQT+E E+T A+L
Sbjct: 55  QLAKEEEGYLAEQKIQEQLQKELDDYEKKMSLMEAITDKTNSVQVLTRQTSELEQTLASL 114

Query: 422 GEELQRRCACPSCHLDNIGALGGILEADQE 511
           GEELQRRC C  C  +N+  L  +L+ DQ+
Sbjct: 115 GEELQRRCRCQHCEAENLEVLSLLLQGDQD 144


>ref|XP_002517425.1| conserved hypothetical protein [Ricinus communis]
           gi|223543436|gb|EEF44967.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 53/128 (41%), Positives = 76/128 (59%)
 Frame = +2

Query: 2   SQVEALKTEERIHRDDFINQMVEFNKMIRKSQETIACIFHEDTKITSSSDNGDKVEDKQT 181
           S+V+ LK EER  RD+FI QMV+    IR+ QE IA  F ++  I ++++  +KVE    
Sbjct: 96  SEVDGLKNEERTSRDEFIEQMVKLGTRIRRFQEKIASEFQKENSIGTTAETENKVESDSR 155

Query: 182 MLDVQVALNDLEDKLELITSQTHKQEVEYQENQDKQTKVQQELVDWEKNASFIKAVVKET 361
           +L          D ++ I SQT K+E EY   Q  Q +VQQE VD ++  S +  ++KET
Sbjct: 156 IL---------ADMVDQIVSQTTKEEQEYLVEQIIQKQVQQEYVDLQEKVSLMGMIMKET 206

Query: 362 KELQELTR 385
           K LQ+LTR
Sbjct: 207 KALQDLTR 214


>ref|XP_002438144.1| hypothetical protein SORBIDRAFT_10g008750 [Sorghum bicolor]
           gi|241916367|gb|EER89511.1| hypothetical protein
           SORBIDRAFT_10g008750 [Sorghum bicolor]
          Length = 298

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 31/189 (16%)
 Frame = +2

Query: 2   SQVEALKTEERIHRDDFINQMVEFNKMIRKSQETIACIFHEDTKITSSSDNGDKVEDKQT 181
           + ++ALK++    R++FI+ M E N  IR+ Q+  +    E       S  G+ V DK  
Sbjct: 102 THLDALKSKGDNEREEFISNMYEMNAKIRQFQQMASLELAEPNHCELPSTEGEHVRDKSK 161

Query: 182 MLDVQVALNDLEDKLELITSQTHKQEVEYQENQDKQTKVQQELVDWEKNASFIKAVVKET 361
            +D +    +L DK+  I S+    E EY+++     KV+QEL D +   + ++AV+ ET
Sbjct: 162 TVDSEGISKELADKVSNIESEVQLLEEEYKKDLLDHDKVRQELADVQAKRALMEAVMGET 221

Query: 362 KELQEL-------------------------------TRQTAESEETCAALGEELQRRCA 448
           K+LQEL                                 + AE E+  A+L EELQRR A
Sbjct: 222 KQLQELGEYPETHVQLSVCMHFYSHFPMLPAKISLTWNTRAAELEKVHASLAEELQRRYA 281

Query: 449 CPSCHLDNI 475
           CP C ++N+
Sbjct: 282 CPGCGVNNM 290


>gb|AFW76857.1| hypothetical protein ZEAMMB73_834489 [Zea mays]
          Length = 240

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 43/134 (32%), Positives = 77/134 (57%)
 Frame = +2

Query: 2   SQVEALKTEERIHRDDFINQMVEFNKMIRKSQETIACIFHEDTKITSSSDNGDKVEDKQT 181
           + ++ALK++E   R+DFI++M E N  IR+ Q+ ++    E       S +G+ V+DK  
Sbjct: 100 TDLDALKSKEDSEREDFISKMYEMNAKIRQFQQMVSLELAEYNHCELPSTDGEHVKDKSK 159

Query: 182 MLDVQVALNDLEDKLELITSQTHKQEVEYQENQDKQTKVQQELVDWEKNASFIKAVVKET 361
            +D +    +L DK+  I ++    E EY+++     KV+QEL + +   + ++AV++ET
Sbjct: 160 TVDSEGISEELSDKVSNIEAEVQLLEEEYKKDLLYHDKVRQELAEVQAKRALMEAVMEET 219

Query: 362 KELQELTRQTAESE 403
           K+LQEL      +E
Sbjct: 220 KQLQELGEYPEHTE 233


Top