BLASTX nr result

ID: Coptis25_contig00020241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020241
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis ...   527   e-147
emb|CBI28870.3| unnamed protein product [Vitis vinifera]              527   e-147
ref|XP_002534129.1| eukaryotic translation initiation factor 2c,...   507   e-141
ref|XP_002320489.1| argonaute protein group [Populus trichocarpa...   506   e-141
ref|XP_004156089.1| PREDICTED: protein argonaute 16-like [Cucumi...   493   e-137

>ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis vinifera]
          Length = 960

 Score =  527 bits (1358), Expect = e-147
 Identities = 251/325 (77%), Positives = 289/325 (88%)
 Frame = -3

Query: 977  ELSHSAYMPCLDVGKPKRPNYLPLELCSLVSLQRYTKSLSSMQRASLVEKSRQKPQERIR 798
            ELS SAYMPCL+VGKPKRPNYLPLELC LVSLQRYTK+LS MQR++LVEKSRQKPQ+RIR
Sbjct: 414  ELSISAYMPCLNVGKPKRPNYLPLELCLLVSLQRYTKALSIMQRSTLVEKSRQKPQDRIR 473

Query: 797  TVTDAIKNYRYDDDAMLKACGISVEKQLTAVEGRVLNAPKLKVGNSEDCIPRNGRWNFNQ 618
            TVTDA++NY+YD+D +L ACGIS+++QLT V+GRVL APKLKVGNSEDCIPRNGRWNFN 
Sbjct: 474  TVTDAVRNYQYDEDPVLSACGISIDRQLTQVDGRVLEAPKLKVGNSEDCIPRNGRWNFNH 533

Query: 617  KRLFSPIEIKRWAVVNFSARCDTSHLSRDLINCGRSKGIKIERPHSLIEEDPRWRRSGPV 438
            K+L +P+ I+RWAVVNFSARCDTSHLSR+LINCGR+KGI IERPH+LIEEDP+ RR+ PV
Sbjct: 534  KKLLTPVRIERWAVVNFSARCDTSHLSRELINCGRNKGILIERPHTLIEEDPQSRRASPV 593

Query: 437  VRVEKMFELIKEKLPGPPQFLLCVLPERKNCDVYGPWKKKNLSEMGIFTRCISPMKINDQ 258
             RVEKMFE+++ KLPGPP+FLLCVLPE+KN ++YGPWKK++LS+ GI T+CISP KINDQ
Sbjct: 594  ARVEKMFEIVRAKLPGPPEFLLCVLPEKKNSEIYGPWKKRSLSDFGIVTQCISPTKINDQ 653

Query: 257  YLTNVLLKINSKLGGVNSLLDVEHXXXXXXXXXXXXXXLGMDVSHGSPGQSDIPSIAAVV 78
            YLTNVLLKIN+KLGG NSLL +EH              LGMDVSHGSPGQ+D+PSIAAVV
Sbjct: 654  YLTNVLLKINTKLGGTNSLLAIEHTSRIPLIKDTPTMILGMDVSHGSPGQADVPSIAAVV 713

Query: 77   GSRSWPLISRYRASVRTQSPKVEMI 3
            GSR WPLISRYRASVRTQSPKVEMI
Sbjct: 714  GSRCWPLISRYRASVRTQSPKVEMI 738


>emb|CBI28870.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  527 bits (1358), Expect = e-147
 Identities = 251/325 (77%), Positives = 289/325 (88%)
 Frame = -3

Query: 977  ELSHSAYMPCLDVGKPKRPNYLPLELCSLVSLQRYTKSLSSMQRASLVEKSRQKPQERIR 798
            ELS SAYMPCL+VGKPKRPNYLPLELC LVSLQRYTK+LS MQR++LVEKSRQKPQ+RIR
Sbjct: 354  ELSISAYMPCLNVGKPKRPNYLPLELCLLVSLQRYTKALSIMQRSTLVEKSRQKPQDRIR 413

Query: 797  TVTDAIKNYRYDDDAMLKACGISVEKQLTAVEGRVLNAPKLKVGNSEDCIPRNGRWNFNQ 618
            TVTDA++NY+YD+D +L ACGIS+++QLT V+GRVL APKLKVGNSEDCIPRNGRWNFN 
Sbjct: 414  TVTDAVRNYQYDEDPVLSACGISIDRQLTQVDGRVLEAPKLKVGNSEDCIPRNGRWNFNH 473

Query: 617  KRLFSPIEIKRWAVVNFSARCDTSHLSRDLINCGRSKGIKIERPHSLIEEDPRWRRSGPV 438
            K+L +P+ I+RWAVVNFSARCDTSHLSR+LINCGR+KGI IERPH+LIEEDP+ RR+ PV
Sbjct: 474  KKLLTPVRIERWAVVNFSARCDTSHLSRELINCGRNKGILIERPHTLIEEDPQSRRASPV 533

Query: 437  VRVEKMFELIKEKLPGPPQFLLCVLPERKNCDVYGPWKKKNLSEMGIFTRCISPMKINDQ 258
             RVEKMFE+++ KLPGPP+FLLCVLPE+KN ++YGPWKK++LS+ GI T+CISP KINDQ
Sbjct: 534  ARVEKMFEIVRAKLPGPPEFLLCVLPEKKNSEIYGPWKKRSLSDFGIVTQCISPTKINDQ 593

Query: 257  YLTNVLLKINSKLGGVNSLLDVEHXXXXXXXXXXXXXXLGMDVSHGSPGQSDIPSIAAVV 78
            YLTNVLLKIN+KLGG NSLL +EH              LGMDVSHGSPGQ+D+PSIAAVV
Sbjct: 594  YLTNVLLKINTKLGGTNSLLAIEHTSRIPLIKDTPTMILGMDVSHGSPGQADVPSIAAVV 653

Query: 77   GSRSWPLISRYRASVRTQSPKVEMI 3
            GSR WPLISRYRASVRTQSPKVEMI
Sbjct: 654  GSRCWPLISRYRASVRTQSPKVEMI 678


>ref|XP_002534129.1| eukaryotic translation initiation factor 2c, putative [Ricinus
            communis] gi|223525814|gb|EEF28257.1| eukaryotic
            translation initiation factor 2c, putative [Ricinus
            communis]
          Length = 863

 Score =  507 bits (1305), Expect = e-141
 Identities = 245/325 (75%), Positives = 278/325 (85%)
 Frame = -3

Query: 977  ELSHSAYMPCLDVGKPKRPNYLPLELCSLVSLQRYTKSLSSMQRASLVEKSRQKPQERIR 798
            EL+ SA++PCLDVGKPKRPNYLP+ELCSLVSLQRYTK+LSS+QRASLVEKSRQKP +RI+
Sbjct: 317  ELTFSAFLPCLDVGKPKRPNYLPIELCSLVSLQRYTKALSSVQRASLVEKSRQKPLDRIK 376

Query: 797  TVTDAIKNYRYDDDAMLKACGISVEKQLTAVEGRVLNAPKLKVGNSEDCIPRNGRWNFNQ 618
            TVTDA++NYRYDD+ ML  CGIS+EKQLT VEGRVL  PKLKVGNSEDC+PRNGRWNFN 
Sbjct: 377  TVTDAVRNYRYDDNPMLSVCGISIEKQLTQVEGRVLETPKLKVGNSEDCVPRNGRWNFNN 436

Query: 617  KRLFSPIEIKRWAVVNFSARCDTSHLSRDLINCGRSKGIKIERPHSLIEEDPRWRRSGPV 438
            K L+    I+RWA+VNFSARCDTS +SRDL+NCGR KGI+IERP++LIEED + RR GP+
Sbjct: 437  KTLWKSTTIERWALVNFSARCDTSQISRDLVNCGRRKGIQIERPYTLIEEDTQSRRGGPL 496

Query: 437  VRVEKMFELIKEKLPGPPQFLLCVLPERKNCDVYGPWKKKNLSEMGIFTRCISPMKINDQ 258
             RVEKMFE I+ KLP  PQF+LCVLPERKN D+YGPWKKK LS+ GI T+CISP KINDQ
Sbjct: 497  ARVEKMFEQIRAKLPSAPQFILCVLPERKNSDIYGPWKKKCLSDFGIVTQCISPFKINDQ 556

Query: 257  YLTNVLLKINSKLGGVNSLLDVEHXXXXXXXXXXXXXXLGMDVSHGSPGQSDIPSIAAVV 78
            YLTNVLLKINSKLGG+NSLL++EH              LGMDVSHG+ G SDIPS+AAVV
Sbjct: 557  YLTNVLLKINSKLGGINSLLEIEHSKQIRLIMDTPTMILGMDVSHGARGCSDIPSVAAVV 616

Query: 77   GSRSWPLISRYRASVRTQSPKVEMI 3
            GSR WPLISRYRA VRTQSPKVEMI
Sbjct: 617  GSRYWPLISRYRACVRTQSPKVEMI 641


>ref|XP_002320489.1| argonaute protein group [Populus trichocarpa]
            gi|222861262|gb|EEE98804.1| argonaute protein group
            [Populus trichocarpa]
          Length = 869

 Score =  506 bits (1302), Expect = e-141
 Identities = 241/325 (74%), Positives = 279/325 (85%)
 Frame = -3

Query: 977  ELSHSAYMPCLDVGKPKRPNYLPLELCSLVSLQRYTKSLSSMQRASLVEKSRQKPQERIR 798
            +L +SAY+PCLDVGKPKRPNYLPLELCSL+SLQRY K+LSSMQRASLVEKSRQKPQERI+
Sbjct: 322  QLGYSAYLPCLDVGKPKRPNYLPLELCSLISLQRYKKALSSMQRASLVEKSRQKPQERIK 381

Query: 797  TVTDAIKNYRYDDDAMLKACGISVEKQLTAVEGRVLNAPKLKVGNSEDCIPRNGRWNFNQ 618
            TVT+A+++Y YD+D +L +CGIS+EKQ+T V+GR+L  PKLKVGNSEDCIPR  RWNFN 
Sbjct: 382  TVTEAMRSYCYDEDPVLSSCGISIEKQMTQVDGRILETPKLKVGNSEDCIPRYVRWNFNN 441

Query: 617  KRLFSPIEIKRWAVVNFSARCDTSHLSRDLINCGRSKGIKIERPHSLIEEDPRWRRSGPV 438
            K L +P  I +WA+VNFSARCD SH+SR+LINCGR KGI IERPH+LIEED + RR  P+
Sbjct: 442  KTLLNPTSISKWAIVNFSARCDISHVSRELINCGRRKGINIERPHTLIEEDQQSRRGSPL 501

Query: 437  VRVEKMFELIKEKLPGPPQFLLCVLPERKNCDVYGPWKKKNLSEMGIFTRCISPMKINDQ 258
             RVE+MFELI+EKLPGPP+F+LCVL ERKN D+YGPWKK +LS+ GI T+CISP KINDQ
Sbjct: 502  ARVERMFELIREKLPGPPEFILCVLAERKNSDIYGPWKKTSLSDFGIVTQCISPTKINDQ 561

Query: 257  YLTNVLLKINSKLGGVNSLLDVEHXXXXXXXXXXXXXXLGMDVSHGSPGQSDIPSIAAVV 78
            YLTNVLLKINSKLGG+NSLL +EH              LGMDVSHGSPG+SD+PS+AAVV
Sbjct: 562  YLTNVLLKINSKLGGINSLLAIEHSSHIPLIMDTPTMILGMDVSHGSPGRSDMPSVAAVV 621

Query: 77   GSRSWPLISRYRASVRTQSPKVEMI 3
            GSR WPLISRYRASVRTQSPKVEMI
Sbjct: 622  GSRCWPLISRYRASVRTQSPKVEMI 646


>ref|XP_004156089.1| PREDICTED: protein argonaute 16-like [Cucumis sativus]
          Length = 903

 Score =  493 bits (1268), Expect = e-137
 Identities = 236/325 (72%), Positives = 273/325 (84%)
 Frame = -3

Query: 977  ELSHSAYMPCLDVGKPKRPNYLPLELCSLVSLQRYTKSLSSMQRASLVEKSRQKPQERIR 798
            EL+HSAY+PCLDVGKPKRP Y+PLELCSLVSLQRYTK+LSSMQRASLVEKSRQKPQE+I+
Sbjct: 357  ELTHSAYLPCLDVGKPKRPTYIPLELCSLVSLQRYTKALSSMQRASLVEKSRQKPQEKIK 416

Query: 797  TVTDAIKNYRYDDDAMLKACGISVEKQLTAVEGRVLNAPKLKVGNSEDCIPRNGRWNFNQ 618
             VTDA+KNYRYD+D +L  CG+ +++QLT ++GRVL +PKLKVG S+DCIPRNGRWNFN 
Sbjct: 417  IVTDALKNYRYDEDPVLAQCGVKIDRQLTQLDGRVLESPKLKVGRSDDCIPRNGRWNFNN 476

Query: 617  KRLFSPIEIKRWAVVNFSARCDTSHLSRDLINCGRSKGIKIERPHSLIEEDPRWRRSGPV 438
            K L +P  I RW VVNFSARCD SH+SR+LINCGR+KGI IERP +LIEED   RR+ PV
Sbjct: 477  KTLLNPTRINRWIVVNFSARCDISHISRELINCGRNKGIHIERPITLIEEDQHSRRASPV 536

Query: 437  VRVEKMFELIKEKLPGPPQFLLCVLPERKNCDVYGPWKKKNLSEMGIFTRCISPMKINDQ 258
             RVE MFE +  K+   P F+LCVLPE+KN ++YGPWKKK L + GIFT+CISP KINDQ
Sbjct: 537  DRVENMFEQMMAKMSDAPMFILCVLPEKKNSNIYGPWKKKCLCDFGIFTQCISPTKINDQ 596

Query: 257  YLTNVLLKINSKLGGVNSLLDVEHXXXXXXXXXXXXXXLGMDVSHGSPGQSDIPSIAAVV 78
            Y+TNVLLKINSKLGG+NSLL +EH              LGMDVSHGSPG+SD+PSIAAVV
Sbjct: 597  YITNVLLKINSKLGGINSLLAIEHASCVPLIKDTPTLILGMDVSHGSPGRSDVPSIAAVV 656

Query: 77   GSRSWPLISRYRASVRTQSPKVEMI 3
            GSRSWPLISRYRA+VRTQSPKVEMI
Sbjct: 657  GSRSWPLISRYRAAVRTQSPKVEMI 681


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