BLASTX nr result

ID: Coptis25_contig00020237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020237
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26657.3| unnamed protein product [Vitis vinifera]              179   3e-43
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti...   179   3e-43
ref|XP_002317340.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_002529912.1| ATP binding protein, putative [Ricinus commu...   162   3e-38
ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glyc...   150   2e-34

>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score =  179 bits (454), Expect = 3e-43
 Identities = 84/112 (75%), Positives = 99/112 (88%)
 Frame = +3

Query: 3    SENIKFYTMSVLRPEKNCTDLEEIVFLYRLVPGHALLSYGLHCAILAGMPEEVLNRAAFV 182
            SE I+FYTMSVLRP+ NCTD+E+IVFLYRLVPGHALLSYGLHCA+LAG+PE+V+ RAA +
Sbjct: 682  SEKIRFYTMSVLRPDNNCTDIEDIVFLYRLVPGHALLSYGLHCALLAGVPEDVIKRAACI 741

Query: 183  LETITSNNQVERVCAERILAKDQQYKEAVDKMLAFDATRGDLNLFFQDIFPS 338
            L+ I +N  VER+C ERI A+DQ YK+AVDKMLAFD  +GDLNLFFQDIFPS
Sbjct: 742  LDAIGNNKHVERLCNERISAQDQLYKDAVDKMLAFDILKGDLNLFFQDIFPS 793


>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
          Length = 807

 Score =  179 bits (454), Expect = 3e-43
 Identities = 84/112 (75%), Positives = 99/112 (88%)
 Frame = +3

Query: 3    SENIKFYTMSVLRPEKNCTDLEEIVFLYRLVPGHALLSYGLHCAILAGMPEEVLNRAAFV 182
            SE I+FYTMSVLRP+ NCTD+E+IVFLYRLVPGHALLSYGLHCA+LAG+PE+V+ RAA +
Sbjct: 696  SEKIRFYTMSVLRPDNNCTDIEDIVFLYRLVPGHALLSYGLHCALLAGVPEDVIKRAACI 755

Query: 183  LETITSNNQVERVCAERILAKDQQYKEAVDKMLAFDATRGDLNLFFQDIFPS 338
            L+ I +N  VER+C ERI A+DQ YK+AVDKMLAFD  +GDLNLFFQDIFPS
Sbjct: 756  LDAIGNNKHVERLCNERISAQDQLYKDAVDKMLAFDILKGDLNLFFQDIFPS 807


>ref|XP_002317340.1| predicted protein [Populus trichocarpa] gi|222860405|gb|EEE97952.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  167 bits (422), Expect = 2e-39
 Identities = 76/111 (68%), Positives = 96/111 (86%)
 Frame = +3

Query: 3   SENIKFYTMSVLRPEKNCTDLEEIVFLYRLVPGHALLSYGLHCAILAGMPEEVLNRAAFV 182
           SE +KF+TMS+LRP+ N TD+++IVFLYRLVPGHALLSYGLHCA+LAG+PEEV+ RAAF+
Sbjct: 23  SEKVKFFTMSLLRPDNNSTDIKDIVFLYRLVPGHALLSYGLHCALLAGVPEEVIKRAAFI 82

Query: 183 LETITSNNQVERVCAERILAKDQQYKEAVDKMLAFDATRGDLNLFFQDIFP 335
           L+T+ S+N VER+C E + A+DQ  KE VD+ML FD  +GD+NLFFQDIFP
Sbjct: 83  LDTVGSSNYVERLCNENLSAQDQLNKETVDRMLEFDVFKGDINLFFQDIFP 133


>ref|XP_002529912.1| ATP binding protein, putative [Ricinus communis]
           gi|223530589|gb|EEF32466.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 328

 Score =  162 bits (411), Expect = 3e-38
 Identities = 76/112 (67%), Positives = 95/112 (84%)
 Frame = +3

Query: 3   SENIKFYTMSVLRPEKNCTDLEEIVFLYRLVPGHALLSYGLHCAILAGMPEEVLNRAAFV 182
           SE +KFYTMSVLRPE N TD+ +IVFLYRLVPGH L SYGLHCA+LAG+PEEV+ RAA V
Sbjct: 217 SEKVKFYTMSVLRPENNSTDVGDIVFLYRLVPGHTLPSYGLHCALLAGVPEEVIRRAAIV 276

Query: 183 LETITSNNQVERVCAERILAKDQQYKEAVDKMLAFDATRGDLNLFFQDIFPS 338
           L+TI +N++++R+C E I  +DQQ K+A+DKML+FD  +GDLNL F+DIFPS
Sbjct: 277 LDTIGNNSRIDRLCNENISTQDQQCKDALDKMLSFDIFKGDLNLLFKDIFPS 328


>ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glycine max]
          Length = 882

 Score =  150 bits (379), Expect = 2e-34
 Identities = 68/110 (61%), Positives = 91/110 (82%)
 Frame = +3

Query: 3    SENIKFYTMSVLRPEKNCTDLEEIVFLYRLVPGHALLSYGLHCAILAGMPEEVLNRAAFV 182
            SE IKFYTMS+LRP+ N T +E+IVFLYRLVPGHA  SYGLHCA+LAG+PEE++ RA  V
Sbjct: 696  SEQIKFYTMSILRPDGNSTHIEDIVFLYRLVPGHAHHSYGLHCALLAGVPEEIIKRATAV 755

Query: 183  LETITSNNQVERVCAERILAKDQQYKEAVDKMLAFDATRGDLNLFFQDIF 332
            L+T+++N  VER+  E I A+D+QYK+A++K+L FD  +GDL +FF+D+F
Sbjct: 756  LDTVSNNKHVERLSNENISAQDRQYKDAMEKLLEFDIDKGDLKIFFEDVF 805


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