BLASTX nr result

ID: Coptis25_contig00020228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020228
         (1300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522871.1| PREDICTED: uncharacterized protein LOC100814...    74   1e-10
ref|XP_004147130.1| PREDICTED: uncharacterized protein LOC101220...    69   3e-09
ref|XP_003637456.1| hypothetical protein MTR_086s0012 [Medicago ...    68   5e-09
ref|XP_003637375.1| hypothetical protein MTR_083s0011, partial [...    63   1e-07
tpg|DAA61675.1| TPA: hypothetical protein ZEAMMB73_448711 [Zea m...    62   2e-07

>ref|XP_003522871.1| PREDICTED: uncharacterized protein LOC100814328 [Glycine max]
          Length = 224

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = +1

Query: 352 DFPDHDGSEVRDGCRQSKDVSSNKLLERLRKYGISGILSYGLLNTVYYLATFFFVW 519
           D   H+GS   +  ++ K +SSN++L++LR+YGISGILSYGLLNT YYL TF FVW
Sbjct: 78  DAYSHEGSSDSEENKKGKSLSSNEILKKLRRYGISGILSYGLLNTAYYLTTFLFVW 133


>ref|XP_004147130.1| PREDICTED: uncharacterized protein LOC101220699 [Cucumis sativus]
           gi|449503524|ref|XP_004162045.1| PREDICTED:
           uncharacterized protein LOC101224099 [Cucumis sativus]
          Length = 212

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
 Frame = +1

Query: 340 QSHQDFPDHD--GSEVRDGCRQSKDVSSNKLLERLRKYGISGILSYGLLNTVYYLATFFF 513
           +S  DF +H+  GS  ++  +Q     SN++L++LR+YG+SGILSYGLLNTVYYL TF  
Sbjct: 60  KSEDDFSNHEMEGSMEKNENQQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLTTFLV 119

Query: 514 VW 519
           VW
Sbjct: 120 VW 121


>ref|XP_003637456.1| hypothetical protein MTR_086s0012 [Medicago truncatula]
           gi|355503391|gb|AES84594.1| hypothetical protein
           MTR_086s0012 [Medicago truncatula]
          Length = 216

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 28/56 (50%), Positives = 41/56 (73%)
 Frame = +1

Query: 352 DFPDHDGSEVRDGCRQSKDVSSNKLLERLRKYGISGILSYGLLNTVYYLATFFFVW 519
           D   H+GS   +  ++   +S N+++++L++YG+SGILSYGLLNT YYL TF FVW
Sbjct: 70  DSTSHEGSAESEESKKGDSLSINEIMKKLKRYGVSGILSYGLLNTAYYLTTFLFVW 125


>ref|XP_003637375.1| hypothetical protein MTR_083s0011, partial [Medicago truncatula]
           gi|355503310|gb|AES84513.1| hypothetical protein
           MTR_083s0011, partial [Medicago truncatula]
          Length = 161

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 26/50 (52%), Positives = 38/50 (76%)
 Frame = +1

Query: 370 GSEVRDGCRQSKDVSSNKLLERLRKYGISGILSYGLLNTVYYLATFFFVW 519
           GS   +  ++   +S N+++++L++YG+SGILSYGLLNT YYL TF FVW
Sbjct: 21  GSAESEESKKGDSLSINEIMKKLKRYGVSGILSYGLLNTAYYLTTFLFVW 70


>tpg|DAA61675.1| TPA: hypothetical protein ZEAMMB73_448711 [Zea mays]
          Length = 220

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = +1

Query: 382 RDGCRQSKDVSSNKLLERLRKYGISGILSYGLLNTVYYLATFFFVW 519
           +DG   +K  S+ +LLE+L++YG++G+LSYGLLNTVYY+  F  VW
Sbjct: 84  KDGKETAKSFSTKELLEKLKRYGVAGVLSYGLLNTVYYVTAFLLVW 129


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