BLASTX nr result

ID: Coptis25_contig00020218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020218
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871932.1| hypothetical protein ARALYDRAFT_910064 [Arab...   120   1e-25
ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782...   120   1e-25
ref|NP_197525.1| putative galactinol--sucrose galactosyltransfer...   119   2e-25
dbj|BAH19983.1| AT5G20250 [Arabidopsis thaliana]                      119   2e-25
dbj|BAD93984.1| seed imbitition protein-like [Arabidopsis thaliana]   119   2e-25

>ref|XP_002871932.1| hypothetical protein ARALYDRAFT_910064 [Arabidopsis lyrata subsp.
           lyrata] gi|297317769|gb|EFH48191.1| hypothetical protein
           ARALYDRAFT_910064 [Arabidopsis lyrata subsp. lyrata]
          Length = 745

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/98 (61%), Positives = 67/98 (68%), Gaps = 27/98 (27%)
 Frame = +3

Query: 6   DDFYPRDPVSH---------------------------IHPVAEYHASARAISGGNIYVS 104
           DDFYPRDPVSH                           +HP AEYHASARAISGG +YVS
Sbjct: 441 DDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDWDMFHSLHPAAEYHASARAISGGPLYVS 500

Query: 105 DAPGKHNFEILRKLVLPNGSTLRARFPGRPTKDCLFSE 218
           DAPGKHNFE+LRKLVLP+GS LRAR PGRPT+DCLF++
Sbjct: 501 DAPGKHNFELLRKLVLPDGSILRARLPGRPTRDCLFAD 538


>ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782723 [Glycine max]
          Length = 1894

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/98 (61%), Positives = 67/98 (68%), Gaps = 27/98 (27%)
 Frame = +3

Query: 6    DDFYPRDPVSH---------------------------IHPVAEYHASARAISGGNIYVS 104
            DDFYPRDPVSH                           +HP AEYHASARAISGG IYVS
Sbjct: 1583 DDFYPRDPVSHTIHVASVAYNSVFLGEIMLPDWDMFHSLHPAAEYHASARAISGGPIYVS 1642

Query: 105  DAPGKHNFEILRKLVLPNGSTLRARFPGRPTKDCLFSE 218
            DAPGKHNF++L+KLVLP+GS LRAR PGRPTKDCLF++
Sbjct: 1643 DAPGKHNFDLLKKLVLPDGSILRARLPGRPTKDCLFTD 1680


>ref|NP_197525.1| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis
           thaliana] gi|79328212|ref|NP_001031910.1| putative
           galactinol--sucrose galactosyltransferase 6 [Arabidopsis
           thaliana] gi|79598832|ref|NP_851044.2| putative
           galactinol--sucrose galactosyltransferase 6 [Arabidopsis
           thaliana] gi|269969643|sp|Q8RX87.2|RFS6_ARATH RecName:
           Full=Probable galactinol--sucrose galactosyltransferase
           6; AltName: Full=Protein DARK INDUCIBLE 10; AltName:
           Full=Raffinose synthase 6 gi|222422909|dbj|BAH19441.1|
           AT5G20250 [Arabidopsis thaliana]
           gi|227204373|dbj|BAH57038.1| AT5G20250 [Arabidopsis
           thaliana] gi|332005435|gb|AED92818.1| putative
           galactinol--sucrose galactosyltransferase 6 [Arabidopsis
           thaliana] gi|332005436|gb|AED92819.1| putative
           galactinol--sucrose galactosyltransferase 6 [Arabidopsis
           thaliana] gi|332005437|gb|AED92820.1| putative
           galactinol--sucrose galactosyltransferase 6 [Arabidopsis
           thaliana]
          Length = 749

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/98 (60%), Positives = 67/98 (68%), Gaps = 27/98 (27%)
 Frame = +3

Query: 6   DDFYPRDPVSH---------------------------IHPVAEYHASARAISGGNIYVS 104
           DDFYPRDPVSH                           +HP AEYHASARAISGG +YVS
Sbjct: 446 DDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDWDMFHSVHPAAEYHASARAISGGPLYVS 505

Query: 105 DAPGKHNFEILRKLVLPNGSTLRARFPGRPTKDCLFSE 218
           D+PGKHNFE+LRKLVLP+GS LRAR PGRPT+DCLF++
Sbjct: 506 DSPGKHNFELLRKLVLPDGSILRARLPGRPTRDCLFAD 543


>dbj|BAH19983.1| AT5G20250 [Arabidopsis thaliana]
          Length = 749

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/98 (60%), Positives = 67/98 (68%), Gaps = 27/98 (27%)
 Frame = +3

Query: 6   DDFYPRDPVSH---------------------------IHPVAEYHASARAISGGNIYVS 104
           DDFYPRDPVSH                           +HP AEYHASARAISGG +YVS
Sbjct: 446 DDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDWDMFHSVHPAAEYHASARAISGGPLYVS 505

Query: 105 DAPGKHNFEILRKLVLPNGSTLRARFPGRPTKDCLFSE 218
           D+PGKHNFE+LRKLVLP+GS LRAR PGRPT+DCLF++
Sbjct: 506 DSPGKHNFELLRKLVLPDGSILRARLPGRPTRDCLFAD 543


>dbj|BAD93984.1| seed imbitition protein-like [Arabidopsis thaliana]
          Length = 351

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/98 (60%), Positives = 67/98 (68%), Gaps = 27/98 (27%)
 Frame = +3

Query: 6   DDFYPRDPVSH---------------------------IHPVAEYHASARAISGGNIYVS 104
           DDFYPRDPVSH                           +HP AEYHASARAISGG +YVS
Sbjct: 48  DDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDWDMFHSVHPAAEYHASARAISGGPLYVS 107

Query: 105 DAPGKHNFEILRKLVLPNGSTLRARFPGRPTKDCLFSE 218
           D+PGKHNFE+LRKLVLP+GS LRAR PGRPT+DCLF++
Sbjct: 108 DSPGKHNFELLRKLVLPDGSILRARLPGRPTRDCLFAD 145


Top