BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020214
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus ...   172   3e-41
ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like...   171   6e-41
ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   170   1e-40
emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]   170   1e-40
ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40

>ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
           gi|223525135|gb|EEF27867.1| spliceosomal protein sap,
           putative [Ricinus communis]
          Length = 1214

 Score =  172 bits (436), Expect = 3e-41
 Identities = 89/143 (62%), Positives = 101/143 (70%), Gaps = 6/143 (4%)
 Frame = +1

Query: 1   ELDYSEADV------GNGAQKFLTFYELDLSLNHVSRKWSEPIDNGANMXXXXXXXXXXX 162
           ELDYSEAD+       N AQK LTFYELDL LNHVSRKWSE +DNGANM           
Sbjct: 186 ELDYSEADLDSTGQAANEAQKVLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGGGDGP 245

Query: 163 XXXXXCAENYVIFKNTGHLDIRAVIPRRSDLPAEHGVLIVSATTYRKKYFLLFLLQSEYG 342
                CAEN+VI+KN GH D+RAVIPRR+DLPAE GVLIVSA T+R+K    FLLQ+EYG
Sbjct: 246 SGVLVCAENFVIYKNEGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLLQTEYG 305

Query: 343 DLFMCTLVYGKENVTELKIKYFD 411
           D+F  TL +  + V ELKIKYFD
Sbjct: 306 DIFKVTLDHENDKVKELKIKYFD 328


>ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
           gi|449513493|ref|XP_004164340.1| PREDICTED: splicing
           factor 3B subunit 3-like [Cucumis sativus]
          Length = 1214

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/143 (60%), Positives = 101/143 (70%), Gaps = 6/143 (4%)
 Frame = +1

Query: 1   ELDYSEAD------VGNGAQKFLTFYELDLSLNHVSRKWSEPIDNGANMXXXXXXXXXXX 162
           ELDYSEAD        + AQK LTFYELDL LNHVSRKWSEP+DNGANM           
Sbjct: 185 ELDYSEADQDSTGVAASEAQKHLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGP 244

Query: 163 XXXXXCAENYVIFKNTGHLDIRAVIPRRSDLPAEHGVLIVSATTYRKKYFLLFLLQSEYG 342
                CAEN+VI+KN GH D+RAVIPRR+DLPAE GVLIVSA  +++K    FLLQ+EYG
Sbjct: 245 SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHKQKTMFFFLLQTEYG 304

Query: 343 DLFMCTLVYGKENVTELKIKYFD 411
           D+F  TL +  ++V ELKIKYFD
Sbjct: 305 DIFKVTLEHNNDSVKELKIKYFD 327


>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/143 (60%), Positives = 101/143 (70%), Gaps = 6/143 (4%)
 Frame = +1

Query: 1   ELDYSEAD------VGNGAQKFLTFYELDLSLNHVSRKWSEPIDNGANMXXXXXXXXXXX 162
           ELDYSEAD        + AQK LTFYELDL LNHVSRKWSE +DNGANM           
Sbjct: 185 ELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGGGDGP 244

Query: 163 XXXXXCAENYVIFKNTGHLDIRAVIPRRSDLPAEHGVLIVSATTYRKKYFLLFLLQSEYG 342
                CAEN+VI+KN GH D+RAVIPRR+DLPAE GVLIVSA T+R+K    FLLQ+EYG
Sbjct: 245 SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLLQTEYG 304

Query: 343 DLFMCTLVYGKENVTELKIKYFD 411
           D+F  TL +  + ++ELKIKYFD
Sbjct: 305 DVFKVTLEHENDRISELKIKYFD 327


>emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
          Length = 1143

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/143 (60%), Positives = 101/143 (70%), Gaps = 6/143 (4%)
 Frame = +1

Query: 1   ELDYSEAD------VGNGAQKFLTFYELDLSLNHVSRKWSEPIDNGANMXXXXXXXXXXX 162
           ELDYSEAD        + AQK LTFYELDL LNHVSRKWSE +DNGANM           
Sbjct: 167 ELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGGGDGP 226

Query: 163 XXXXXCAENYVIFKNTGHLDIRAVIPRRSDLPAEHGVLIVSATTYRKKYFLLFLLQSEYG 342
                CAEN+VI+KN GH D+RAVIPRR+DLPAE GVLIVSA T+R+K    FLLQ+EYG
Sbjct: 227 SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLLQTEYG 286

Query: 343 DLFMCTLVYGKENVTELKIKYFD 411
           D+F  TL +  + ++ELKIKYFD
Sbjct: 287 DVFKVTLEHENDRISELKIKYFD 309


>ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|222851883|gb|EEE89430.1|
           predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  167 bits (424), Expect = 6e-40
 Identities = 87/143 (60%), Positives = 99/143 (69%), Gaps = 6/143 (4%)
 Frame = +1

Query: 1   ELDYSEAD------VGNGAQKFLTFYELDLSLNHVSRKWSEPIDNGANMXXXXXXXXXXX 162
           ELDYSEAD          AQK LTFYELDL LNHVSRKWSE +DNGANM           
Sbjct: 185 ELDYSEADQDSTGQAAGEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGGGDGP 244

Query: 163 XXXXXCAENYVIFKNTGHLDIRAVIPRRSDLPAEHGVLIVSATTYRKKYFLLFLLQSEYG 342
                CAEN+VI+KN GH D+RAVIPRR+DLPAE GVLIVSA T+++K    FLLQ+EYG
Sbjct: 245 SGILVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQTEYG 304

Query: 343 DLFMCTLVYGKENVTELKIKYFD 411
           D+F  TL +  + V ELKIKYFD
Sbjct: 305 DIFKVTLDHENDKVKELKIKYFD 327